RNA–Protein interactions for RNA: ENST00000457599.6

ARID1A-205, Transcript of AT-rich interaction domain 1A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARID1A, Length 6,268 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-205ENST00000457599 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
ARID1A-205ENST00000457599 NUTM2FA1L443 756 aa20.92■□□□□ 0.94
ARID1A-205ENST00000457599 CALD1Q05682 793 aaKnown RBP20.92■□□□□ 0.94
ARID1A-205ENST00000457599 GPATCH3Q96I76 525 aa20.91■□□□□ 0.94
ARID1A-205ENST00000457599 IPO9Q96P70 1041 aaKnown RBP20.91■□□□□ 0.94
ARID1A-205ENST00000457599 KLHL34Q8N239 644 aa20.91■□□□□ 0.94
ARID1A-205ENST00000457599 TDRD9Q8NDG6 1382 aaKnown RBP20.91■□□□□ 0.94
ARID1A-205ENST00000457599 CCDC34Q96HJ3 373 aa20.9■□□□□ 0.94
ARID1A-205ENST00000457599 RALBP1Q15311 655 aa20.9■□□□□ 0.94
ARID1A-205ENST00000457599 CNKSR2Q8WXI2 1034 aa20.89■□□□□ 0.93
ARID1A-205ENST00000457599 NUTM2DQ5VT03 806 aaPredicted RBP20.89■□□□□ 0.93
ARID1A-205ENST00000457599 RAB3GAP2Q9H2M9 1393 aa20.89■□□□□ 0.93
ARID1A-205ENST00000457599 CSPP1Q1MSJ5 1256 aa20.88■□□□□ 0.93
ARID1A-205ENST00000457599 TSHZ2Q9NRE2 1034 aa20.88■□□□□ 0.93
ARID1A-205ENST00000457599 RUSC2Q8N2Y8 1516 aa20.87■□□□□ 0.93
ARID1A-205ENST00000457599 SPAG9O60271 1321 aaKnown RBP20.87■□□□□ 0.93
ARID1A-205ENST00000457599 PATL2C9JE40 543 aaKnown RBP20.87■□□□□ 0.93
ARID1A-205ENST00000457599 PKD2Q13563 968 aa20.86■□□□□ 0.93
ARID1A-205ENST00000457599 TPM3P06753 285 aa20.86■□□□□ 0.93
ARID1A-205ENST00000457599 RAPGEF2Q9Y4G8 1499 aa20.85■□□□□ 0.93
ARID1A-205ENST00000457599 SMC4Q9NTJ3 1288 aa20.85■□□□□ 0.93
ARID1A-205ENST00000457599 SF3A1Q15459 793 aaKnown RBP20.84■□□□□ 0.93
ARID1A-205ENST00000457599 CLUAP1Q96AJ1 413 aa20.84■□□□□ 0.93
ARID1A-205ENST00000457599 CCDC146Q8IYE0 955 aa20.83■□□□□ 0.93
ARID1A-205ENST00000457599 TPD52L1Q16890 204 aaPredicted RBP20.83■□□□□ 0.92
ARID1A-205ENST00000457599 NGDNQ8NEJ9 315 aaKnown RBP20.83■□□□□ 0.92
ARID1A-205ENST00000457599 EIF3AQ14152 1382 aaKnown RBP20.81■□□□□ 0.92
ARID1A-205ENST00000457599 TCEAL9Q9UHQ7 104 aa20.81■□□□□ 0.92
ARID1A-205ENST00000457599 PHF14O94880 888 aa20.8■□□□□ 0.92
ARID1A-205ENST00000457599 CCAR2Q8N163 923 aaKnown RBP20.8■□□□□ 0.92
ARID1A-205ENST00000457599 AMPHP49418 695 aa20.79■□□□□ 0.92
ARID1A-205ENST00000457599 FOXD4L6Q3SYB3 417 aaPredicted RBP20.79■□□□□ 0.92
ARID1A-205ENST00000457599 FOXD4L3Q6VB84 417 aaPredicted RBP20.79■□□□□ 0.92
ARID1A-205ENST00000457599 CTDP1Q9Y5B0 961 aaPredicted RBP20.78■□□□□ 0.92
ARID1A-205ENST00000457599 NGEFQ8N5V2 710 aa20.77■□□□□ 0.92
ARID1A-205ENST00000457599 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.77■□□□□ 0.922e-7■■□□□ 14.1
ARID1A-205ENST00000457599 FBXW7Q969H0 707 aa20.76■□□□□ 0.91
ARID1A-205ENST00000457599 FHOD3Q2V2M9 1422 aa20.76■□□□□ 0.91
ARID1A-205ENST00000457599 SAMD1Q6SPF0 538 aaPredicted RBP20.76■□□□□ 0.91
ARID1A-205ENST00000457599 HMMRO75330 724 aa20.76■□□□□ 0.91
ARID1A-205ENST00000457599 CENPJQ9HC77 1338 aaPredicted RBP20.75■□□□□ 0.91
ARID1A-205ENST00000457599 TRIM34Q9BYJ4 488 aa20.75■□□□□ 0.91
ARID1A-205ENST00000457599 ATAD2BQ9ULI0 1458 aa20.74■□□□□ 0.91
ARID1A-205ENST00000457599 DDX11L8A8MPP1 907 aa20.74■□□□□ 0.91
ARID1A-205ENST00000457599 KIF16BQ96L93 1317 aa20.74■□□□□ 0.91
ARID1A-205ENST00000457599 MPHOSPH9Q99550 1183 aa20.74■□□□□ 0.91
ARID1A-205ENST00000457599 ST18O60284 1047 aa20.73■□□□□ 0.91
ARID1A-205ENST00000457599 SMARCA4P51532 1647 aa20.73■□□□□ 0.91
ARID1A-205ENST00000457599 H3BQV1 296 aa20.73■□□□□ 0.91
ARID1A-205ENST00000457599 IFFO2Q5TF58 517 aa20.73■□□□□ 0.91
ARID1A-205ENST00000457599 OSCARQ8IYS5 282 aa20.73■□□□□ 0.91
ARID1A-205ENST00000457599 AKAP17AQ02040 695 aaKnown RBP20.72■□□□□ 0.91
ARID1A-205ENST00000457599 EVA1CP58658 441 aa20.71■□□□□ 0.91
ARID1A-205ENST00000457599 TSR1Q2NL82 804 aaKnown RBP20.71■□□□□ 0.91
ARID1A-205ENST00000457599 RILPL2Q969X0 211 aa20.71■□□□□ 0.91
ARID1A-205ENST00000457599 CWC22Q9HCG8 908 aaKnown RBP20.71■□□□□ 0.91
ARID1A-205ENST00000457599 FMN1Q68DA7 1419 aa20.71■□□□□ 0.91
ARID1A-205ENST00000457599 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.7■□□□□ 0.91
ARID1A-205ENST00000457599 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
ARID1A-205ENST00000457599 HSP90AA2PQ14568 343 aaPredicted RBP20.69■□□□□ 0.9
ARID1A-205ENST00000457599 PDS5BQ9NTI5 1447 aa20.69■□□□□ 0.9
ARID1A-205ENST00000457599 EID1Q9Y6B2 187 aa20.69■□□□□ 0.9
ARID1A-205ENST00000457599 DHX16O60231 1041 aaKnown RBP20.69■□□□□ 0.9
ARID1A-205ENST00000457599 DCAF8L1A6NGE4 600 aa20.68■□□□□ 0.9
ARID1A-205ENST00000457599 USP35Q9P2H5 1018 aa20.68■□□□□ 0.9
ARID1A-205ENST00000457599 PCMTD1Q96MG8 357 aaPredicted RBP20.68■□□□□ 0.9
ARID1A-205ENST00000457599 HDAC5Q9UQL6 1122 aa20.68■□□□□ 0.9
ARID1A-205ENST00000457599 ELL2O00472 640 aaPredicted RBP20.68■□□□□ 0.9
ARID1A-205ENST00000457599 FAM184AQ8NB25 1140 aa20.68■□□□□ 0.9
ARID1A-205ENST00000457599 CHMP4AQ9BY43 222 aa20.67■□□□□ 0.9
ARID1A-205ENST00000457599 SETQ01105 290 aaPredicted RBP20.67■□□□□ 0.9
ARID1A-205ENST00000457599 NUP155O75694 1391 aa20.67■□□□□ 0.9
ARID1A-205ENST00000457599 MCTP1Q6DN14 999 aa20.67■□□□□ 0.9
ARID1A-205ENST00000457599 SYTL4Q96C24 671 aaPredicted RBP20.66■□□□□ 0.9
ARID1A-205ENST00000457599 RSPH6AQ9H0K4 717 aa20.65■□□□□ 0.9
ARID1A-205ENST00000457599 NOL10Q9BSC4 688 aaKnown RBP20.64■□□□□ 0.89
ARID1A-205ENST00000457599 TPM2P07951 284 aa20.63■□□□□ 0.89
ARID1A-205ENST00000457599 SLC4A3P48751 1232 aa20.63■□□□□ 0.89
ARID1A-205ENST00000457599 ANKRD30AQ9BXX3 1397 aa20.63■□□□□ 0.89
ARID1A-205ENST00000457599 RRP7AQ9Y3A4 280 aaKnown RBP20.63■□□□□ 0.89
ARID1A-205ENST00000457599 KIF3AQ9Y496 699 aa20.63■□□□□ 0.89
ARID1A-205ENST00000457599 KIF15Q9NS87 1388 aa20.62■□□□□ 0.89
ARID1A-205ENST00000457599 TERF2IPQ9NYB0 399 aa20.62■□□□□ 0.89
ARID1A-205ENST00000457599 SYNE3Q6ZMZ3 975 aa20.61■□□□□ 0.89
ARID1A-205ENST00000457599 LMOD3Q0VAK6 560 aa20.61■□□□□ 0.89
ARID1A-205ENST00000457599 PDE3BQ13370 1112 aa20.61■□□□□ 0.89
ARID1A-205ENST00000457599 APPP05067 770 aa20.61■□□□□ 0.89
ARID1A-205ENST00000457599 CENPQQ7L2Z9 268 aaPredicted RBP20.6■□□□□ 0.89
ARID1A-205ENST00000457599 AMOTL1Q8IY63 956 aa20.6■□□□□ 0.89
ARID1A-205ENST00000457599 L3MBTL2Q969R5 705 aa20.6■□□□□ 0.89
ARID1A-205ENST00000457599 DHX57Q6P158 1386 aaKnown RBP20.6■□□□□ 0.89
ARID1A-205ENST00000457599 PHLDB1Q86UU1 1377 aa20.6■□□□□ 0.89
ARID1A-205ENST00000457599 GOLGA6L19H0YKK7 550 aa20.59■□□□□ 0.89
ARID1A-205ENST00000457599 FAM161AQ3B820 660 aa20.59■□□□□ 0.89
ARID1A-205ENST00000457599 FAM69CQ0P6D2 419 aa20.59■□□□□ 0.89
ARID1A-205ENST00000457599 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.59■□□□□ 0.893e-7■■■■■ 104.3
ARID1A-205ENST00000457599 BECN2A8MW95 431 aa20.58■□□□□ 0.89
ARID1A-205ENST00000457599 ZNF592Q92610 1267 aa20.58■□□□□ 0.89
ARID1A-205ENST00000457599 C1orf141Q5JVX7 400 aa20.58■□□□□ 0.89
ARID1A-205ENST00000457599 DDX49Q9Y6V7 483 aaKnown RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms