RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 PLA2R1Q13018 1463 aa23.13■■□□□ 1.29
CCDC43-202ENST00000457422 RTEL1-TNFRSF6BF6WH68 1400 aa23.12■■□□□ 1.29
CCDC43-202ENST00000457422 ABCA9Q8IUA7 1624 aa23.12■■□□□ 1.29
CCDC43-202ENST00000457422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.12■■□□□ 1.292e-6■□□□□ 10.7
CCDC43-202ENST00000457422 PRKRIP1Q9H875 184 aaPredicted RBP23.11■■□□□ 1.29
CCDC43-202ENST00000457422 ZFYVE16Q7Z3T8 1539 aa23.09■■□□□ 1.29
CCDC43-202ENST00000457422 KDM2AQ9Y2K7 1162 aa23.08■■□□□ 1.29
CCDC43-202ENST00000457422 TRPM1Q7Z4N2 1603 aa23.08■■□□□ 1.29
CCDC43-202ENST00000457422 DCAF11Q8TEB1 546 aa23.07■■□□□ 1.28
CCDC43-202ENST00000457422 PRAG1Q86YV5 1406 aa23.06■■□□□ 1.28
CCDC43-202ENST00000457422 CARD11Q9BXL7 1154 aa23.05■■□□□ 1.28
CCDC43-202ENST00000457422 ROCK2O75116 1388 aaKnown RBP23.04■■□□□ 1.28
CCDC43-202ENST00000457422 INO80Q9ULG1 1556 aaPredicted RBP23.04■■□□□ 1.28
CCDC43-202ENST00000457422 DEPDC5O75140 1603 aa23.03■■□□□ 1.28
CCDC43-202ENST00000457422 LAMC1P11047 1609 aa23.03■■□□□ 1.28
CCDC43-202ENST00000457422 A2MP01023 1474 aa23.03■■□□□ 1.28
CCDC43-202ENST00000457422 DHX29Q7Z478 1369 aaKnown RBP23.02■■□□□ 1.28
CCDC43-202ENST00000457422 SPAG9O60271 1321 aaKnown RBP23.02■■□□□ 1.28
CCDC43-202ENST00000457422 FANCAO15360 1455 aa23.01■■□□□ 1.27
CCDC43-202ENST00000457422 CCDC184Q52MB2 194 aa23.01■■□□□ 1.27
CCDC43-202ENST00000457422 EIF2AK4Q9P2K8 1649 aaKnown RBP23■■□□□ 1.27
CCDC43-202ENST00000457422 AFAP1Q8N556 730 aa22.99■■□□□ 1.27
CCDC43-202ENST00000457422 GPRASP1Q5JY77 1395 aa22.99■■□□□ 1.27
CCDC43-202ENST00000457422 ATP7AQ04656 1500 aa22.99■■□□□ 1.27
CCDC43-202ENST00000457422 E9PCH4 1651 aa22.98■■□□□ 1.27
CCDC43-202ENST00000457422 ASXL2Q76L83 1435 aa22.98■■□□□ 1.27
CCDC43-202ENST00000457422 HNRNPUQ00839 825 aaKnown RBP eCLIP22.97■■□□□ 1.27
CCDC43-202ENST00000457422 POLR3GLQ9BT43 218 aa22.97■■□□□ 1.27
CCDC43-202ENST00000457422 RGL3Q3MIN7 710 aa22.96■■□□□ 1.27
CCDC43-202ENST00000457422 ADGRL1O94910 1474 aa22.94■■□□□ 1.26
CCDC43-202ENST00000457422 ST20-MTHFSA0A0A6YYL1 179 aa22.94■■□□□ 1.26
CCDC43-202ENST00000457422 VWDEQ8N2E2 1590 aa22.94■■□□□ 1.26
CCDC43-202ENST00000457422 TRPM2O94759 1503 aa22.93■■□□□ 1.26
CCDC43-202ENST00000457422 PRDM15P57071 1507 aaPredicted RBP22.93■■□□□ 1.26
CCDC43-202ENST00000457422 TET3O43151 1660 aa22.93■■□□□ 1.26
CCDC43-202ENST00000457422 MRS2Q9HD23 443 aa22.93■■□□□ 1.26
CCDC43-202ENST00000457422 SPHKAPQ2M3C7 1700 aa22.92■■□□□ 1.26
CCDC43-202ENST00000457422 CEP152O94986 1710 aa22.9■■□□□ 1.26
CCDC43-202ENST00000457422 RNF17Q9BXT8 1623 aaKnown RBP22.9■■□□□ 1.26
CCDC43-202ENST00000457422 PTPRTO14522 1441 aa22.9■■□□□ 1.26
CCDC43-202ENST00000457422 SCAPERQ9BY12 1400 aa22.9■■□□□ 1.26
CCDC43-202ENST00000457422 FKBP8Q14318 412 aa22.89■■□□□ 1.26
CCDC43-202ENST00000457422 OSCARQ8IYS5 282 aa22.89■■□□□ 1.25
CCDC43-202ENST00000457422 NEFLP07196 543 aa22.88■■□□□ 1.25
CCDC43-202ENST00000457422 NBPF1Q3BBV0 1214 aa22.86■■□□□ 1.25
CCDC43-202ENST00000457422 FAM9BQ8IZU0 186 aa22.86■■□□□ 1.25
CCDC43-202ENST00000457422 MROH1Q8NDA8 1641 aa22.85■■□□□ 1.25
CCDC43-202ENST00000457422 CFAP74Q9C0B2 1584 aa22.85■■□□□ 1.25
CCDC43-202ENST00000457422 KIDINS220Q9ULH0 1771 aa22.84■■□□□ 1.25
CCDC43-202ENST00000457422 NEURL4Q96JN8 1562 aa22.84■■□□□ 1.25
CCDC43-202ENST00000457422 CLTCL1P53675 1640 aa22.83■■□□□ 1.25
CCDC43-202ENST00000457422 MADDQ8WXG6 1647 aa22.83■■□□□ 1.25
CCDC43-202ENST00000457422 KANK1Q14678 1352 aa22.83■■□□□ 1.25
CCDC43-202ENST00000457422 KTN1Q86UP2 1357 aaKnown RBP22.83■■□□□ 1.25
CCDC43-202ENST00000457422 ZBED9Q6R2W3 1325 aa22.83■■□□□ 1.25
CCDC43-202ENST00000457422 COL17A1Q9UMD9 1497 aaPredicted RBP22.82■■□□□ 1.24
CCDC43-202ENST00000457422 BCANQ96GW7 911 aa22.82■■□□□ 1.24
CCDC43-202ENST00000457422 ZNF518AQ6AHZ1 1483 aa22.81■■□□□ 1.24
CCDC43-202ENST00000457422 CNGB1Q14028 1251 aaPredicted RBP22.81■■□□□ 1.24
CCDC43-202ENST00000457422 MYT1LQ9UL68 1186 aa22.8■■□□□ 1.24
CCDC43-202ENST00000457422 NPM1P06748 294 aaKnown RBP eCLIP22.8■■□□□ 1.24
CCDC43-202ENST00000457422 STAC3Q96MF2 364 aa22.8■■□□□ 1.24
CCDC43-202ENST00000457422 KIF3BO15066 747 aa22.77■■□□□ 1.24
CCDC43-202ENST00000457422 IQGAP1P46940 1657 aa22.76■■□□□ 1.23
CCDC43-202ENST00000457422 TESK2Q96S53 571 aa22.76■■□□□ 1.23
CCDC43-202ENST00000457422 EFCAB6Q5THR3 1501 aa22.75■■□□□ 1.23
CCDC43-202ENST00000457422 LMTK2Q8IWU2 1503 aa22.75■■□□□ 1.23
CCDC43-202ENST00000457422 RALBP1Q15311 655 aa22.74■■□□□ 1.23
CCDC43-202ENST00000457422 CD109Q6YHK3 1445 aa22.73■■□□□ 1.23
CCDC43-202ENST00000457422 POGZQ7Z3K3 1410 aa22.73■■□□□ 1.23
CCDC43-202ENST00000457422 KIAA1210Q9ULL0 1709 aa22.73■■□□□ 1.23
CCDC43-202ENST00000457422 DISP3Q9P2K9 1392 aa22.72■■□□□ 1.23
CCDC43-202ENST00000457422 MLH3Q9UHC1 1453 aa22.71■■□□□ 1.23
CCDC43-202ENST00000457422 BRD4O60885 1362 aaPredicted RBP22.71■■□□□ 1.23
CCDC43-202ENST00000457422 MYBBP1AQ9BQG0 1328 aaKnown RBP22.7■■□□□ 1.22
CCDC43-202ENST00000457422 PPRC1Q5VV67 1664 aaKnown RBP22.7■■□□□ 1.22
CCDC43-202ENST00000457422 HECW2Q9P2P5 1572 aa22.69■■□□□ 1.22
CCDC43-202ENST00000457422 KIF1BO60333 1816 aa22.68■■□□□ 1.22
CCDC43-202ENST00000457422 PNISRQ8TF01 805 aaKnown RBP22.68■■□□□ 1.22
CCDC43-202ENST00000457422 PARD3Q8TEW0 1356 aa22.68■■□□□ 1.22
CCDC43-202ENST00000457422 WASHC2CQ9Y4E1 1318 aa22.67■■□□□ 1.22
CCDC43-202ENST00000457422 FRMPD1Q5SYB0 1578 aa22.66■■□□□ 1.22
CCDC43-202ENST00000457422 PER1O15534 1290 aaPredicted RBP22.66■■□□□ 1.22
CCDC43-202ENST00000457422 TMF1P82094 1093 aa22.66■■□□□ 1.22
CCDC43-202ENST00000457422 LRPPRCP42704 1394 aaKnown RBP22.66■■□□□ 1.22
CCDC43-202ENST00000457422 MYOM2P54296 1465 aa22.66■■□□□ 1.22
CCDC43-202ENST00000457422 IFT172Q9UG01 1749 aa22.66■■□□□ 1.22
CCDC43-202ENST00000457422 SCAF11Q99590 1463 aaKnown RBP22.65■■□□□ 1.22
CCDC43-202ENST00000457422 TMC1Q8TDI8 760 aa22.65■■□□□ 1.22
CCDC43-202ENST00000457422 NEO1Q92859 1461 aa22.65■■□□□ 1.22
CCDC43-202ENST00000457422 UGGT1Q9NYU2 1555 aa22.65■■□□□ 1.22
CCDC43-202ENST00000457422 ERICH6BQ5W0A0 696 aa22.64■■□□□ 1.22
CCDC43-202ENST00000457422 MAP3K4Q9Y6R4 1608 aa22.64■■□□□ 1.21
CCDC43-202ENST00000457422 SMG6Q86US8 1419 aaKnown RBP22.61■■□□□ 1.21
CCDC43-202ENST00000457422 ABCA6Q8N139 1617 aa22.61■■□□□ 1.21
CCDC43-202ENST00000457422 MROH2AA6NES4 1674 aa22.6■■□□□ 1.21
CCDC43-202ENST00000457422 TSHZ2Q9NRE2 1034 aa22.6■■□□□ 1.21
CCDC43-202ENST00000457422 NLRP13Q86W25 1043 aa22.59■■□□□ 1.21
CCDC43-202ENST00000457422 IRX6P78412 446 aaPredicted RBP22.58■■□□□ 1.21
CCDC43-202ENST00000457422 ADGRB3O60242 1522 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms