RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 RRBP1Q9P2E9 1410 aaKnown RBP15.4■□□□□ 0.06
ATG4A-206ENST00000457035 ADGBQ8N7X0 1667 aa15.39■□□□□ 0.05
ATG4A-206ENST00000457035 CROCC2H7BZ55 1655 aa15.38■□□□□ 0.05
ATG4A-206ENST00000457035 C1QBPQ07021 282 aaKnown RBP15.38■□□□□ 0.05
ATG4A-206ENST00000457035 CHIC2Q9UKJ5 165 aa15.38■□□□□ 0.05
ATG4A-206ENST00000457035 A2MP01023 1474 aa15.38■□□□□ 0.05
ATG4A-206ENST00000457035 LMTK3Q96Q04 1460 aa15.38■□□□□ 0.05
ATG4A-206ENST00000457035 AGLP35573 1532 aa15.38■□□□□ 0.05
ATG4A-206ENST00000457035 DHX29Q7Z478 1369 aaKnown RBP15.37■□□□□ 0.05
ATG4A-206ENST00000457035 SHANK2Q9UPX8 1470 aa15.37■□□□□ 0.05
ATG4A-206ENST00000457035 PTPRKQ15262 1439 aa15.36■□□□□ 0.05
ATG4A-206ENST00000457035 MLECQ14165 292 aa15.36■□□□□ 0.05
ATG4A-206ENST00000457035 PLXNC1O60486 1568 aa15.36■□□□□ 0.05
ATG4A-206ENST00000457035 NCOA1Q15788 1441 aa15.34■□□□□ 0.05
ATG4A-206ENST00000457035 RRP7BPQ9NSQ0 103 aa15.34■□□□□ 0.05
ATG4A-206ENST00000457035 ITGAEP38570 1179 aa15.32■□□□□ 0.04
ATG4A-206ENST00000457035 ANKRD30AQ9BXX3 1397 aa15.32■□□□□ 0.04
ATG4A-206ENST00000457035 ADGRL2O95490 1459 aa15.32■□□□□ 0.04
ATG4A-206ENST00000457035 KIF3BO15066 747 aa15.31■□□□□ 0.04
ATG4A-206ENST00000457035 KIF15Q9NS87 1388 aa15.31■□□□□ 0.04
ATG4A-206ENST00000457035 PREX1Q8TCU6 1659 aa15.31■□□□□ 0.04
ATG4A-206ENST00000457035 HSPA2P54652 639 aa15.3■□□□□ 0.04
ATG4A-206ENST00000457035 DUOX2Q9NRD8 1548 aa15.29■□□□□ 0.04
ATG4A-206ENST00000457035 GGT6Q6P531 493 aa15.29■□□□□ 0.04
ATG4A-206ENST00000457035 ROCK1Q13464 1354 aa15.28■□□□□ 0.04
ATG4A-206ENST00000457035 SLC4A2P04920 1241 aa15.28■□□□□ 0.04
ATG4A-206ENST00000457035 FBXO41Q8TF61 875 aa15.27■□□□□ 0.04
ATG4A-206ENST00000457035 ERBINQ96RT1 1412 aa15.25■□□□□ 0.03
ATG4A-206ENST00000457035 EIF2AK4Q9P2K8 1649 aaKnown RBP15.25■□□□□ 0.03
ATG4A-206ENST00000457035 C3P01024 1663 aa15.24■□□□□ 0.03
ATG4A-206ENST00000457035 SLC4A1APQ9BWU0 796 aaKnown RBP15.23■□□□□ 0.03
ATG4A-206ENST00000457035 SETD1BQ9UPS6 1966 aaKnown RBP15.23■□□□□ 0.03
ATG4A-206ENST00000457035 RNF17Q9BXT8 1623 aaKnown RBP15.22■□□□□ 0.03
ATG4A-206ENST00000457035 ESF1Q9H501 851 aaKnown RBP15.22■□□□□ 0.03
ATG4A-206ENST00000457035 ANKRD50Q9ULJ7 1429 aa15.22■□□□□ 0.03
ATG4A-206ENST00000457035 CEBPAP49715 358 aaPredicted RBP15.21■□□□□ 0.03
ATG4A-206ENST00000457035 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
ATG4A-206ENST00000457035 CNTLNQ9NXG0 1405 aa15.2■□□□□ 0.02
ATG4A-206ENST00000457035 STRCQ7RTU9 1775 aa15.2■□□□□ 0.02
ATG4A-206ENST00000457035 ZMYM3Q14202 1370 aa15.2■□□□□ 0.02
ATG4A-206ENST00000457035 MROH1Q8NDA8 1641 aa15.2■□□□□ 0.02
ATG4A-206ENST00000457035 WASHC2CQ9Y4E1 1318 aa15.19■□□□□ 0.02
ATG4A-206ENST00000457035 CLTCQ00610 1675 aaKnown RBP15.19■□□□□ 0.02
ATG4A-206ENST00000457035 CFAP65Q6ZU64 1925 aaKnown RBP15.18■□□□□ 0.02
ATG4A-206ENST00000457035 NAIPQ13075 1403 aa15.17■□□□□ 0.02
ATG4A-206ENST00000457035 DEPDC5O75140 1603 aa15.17■□□□□ 0.02
ATG4A-206ENST00000457035 MROH2AA6NES4 1674 aa15.17■□□□□ 0.02
ATG4A-206ENST00000457035 FAM135AQ9P2D6 1515 aa15.16■□□□□ 0.02
ATG4A-206ENST00000457035 KDM5DQ9BY66 1539 aa15.15■□□□□ 0.02
ATG4A-206ENST00000457035 HFM1A2PYH4 1435 aa15.15■□□□□ 0.02
ATG4A-206ENST00000457035 PRDM15P57071 1507 aaPredicted RBP15.14■□□□□ 0.01
ATG4A-206ENST00000457035 UHRF1BP1Q6BDS2 1440 aa15.14■□□□□ 0.01
ATG4A-206ENST00000457035 ABCC3O15438 1527 aa15.13■□□□□ 0.01
ATG4A-206ENST00000457035 CEP152O94986 1710 aa15.13■□□□□ 0.01
ATG4A-206ENST00000457035 VWDEQ8N2E2 1590 aa15.13■□□□□ 0.01
ATG4A-206ENST00000457035 GCC2Q8IWJ2 1684 aa15.12■□□□□ 0.01
ATG4A-206ENST00000457035 ZC3H13Q5T200 1668 aaKnown RBP15.12■□□□□ 0.01
ATG4A-206ENST00000457035 KANK1Q14678 1352 aa15.11■□□□□ 0.01
ATG4A-206ENST00000457035 FBXO31Q5XUX0 539 aaPredicted RBP15.11■□□□□ 0.01
ATG4A-206ENST00000457035 CERKQ8TCT0 537 aa15.1■□□□□ 0.01
ATG4A-206ENST00000457035 UNC13BO14795 1591 aa15.1■□□□□ 0.01
ATG4A-206ENST00000457035 LMTK2Q8IWU2 1503 aa15.09■□□□□ 0.01
ATG4A-206ENST00000457035 NUP155O75694 1391 aa15.09■□□□□ 0.01
ATG4A-206ENST00000457035 NPATQ14207 1427 aa15.09■□□□□ 0.01
ATG4A-206ENST00000457035 PZPP20742 1482 aa15.08■□□□□ 0.01
ATG4A-206ENST00000457035 CAMSAP1Q5T5Y3 1602 aa15.08■□□□□ 0
ATG4A-206ENST00000457035 ARHGAP31Q2M1Z3 1444 aa15.08■□□□□ 0
ATG4A-206ENST00000457035 SETD5Q9C0A6 1442 aa15.06■□□□□ 0
ATG4A-206ENST00000457035 IQGAP3Q86VI3 1631 aa15.05■□□□□ -0
ATG4A-206ENST00000457035 TET3O43151 1660 aa15.03■□□□□ -0
ATG4A-206ENST00000457035 MYO3AQ8NEV4 1616 aa15.03■□□□□ -0
ATG4A-206ENST00000457035 TRIM52Q96A61 297 aa15.03■□□□□ -0
ATG4A-206ENST00000457035 TNRQ92752 1358 aa15.02■□□□□ -0
ATG4A-206ENST00000457035 SPATA31D1Q6ZQQ2 1576 aa15.02□□□□□ -0.01
ATG4A-206ENST00000457035 EFCAB6Q5THR3 1501 aa15.02□□□□□ -0.01
ATG4A-206ENST00000457035 ERVK-7P63135 1459 aa15.01□□□□□ -0.01
ATG4A-206ENST00000457035 ZNF142P52746 1687 aaPredicted RBP15.01□□□□□ -0.01
ATG4A-206ENST00000457035 HRCP23327 699 aa15.01□□□□□ -0.01
ATG4A-206ENST00000457035 TRIM26Q12899 539 aaPredicted RBP15.01□□□□□ -0.01
ATG4A-206ENST00000457035 RAB3GAP2Q9H2M9 1393 aa15□□□□□ -0.01
ATG4A-206ENST00000457035 E9PCH4 1651 aa15□□□□□ -0.01
ATG4A-206ENST00000457035 ACIN1Q9UKV3 1341 aaKnown RBP14.99□□□□□ -0.01
ATG4A-206ENST00000457035 RPRD2Q5VT52 1461 aaKnown RBP14.99□□□□□ -0.01
ATG4A-206ENST00000457035 PTPRTO14522 1441 aa14.99□□□□□ -0.01
ATG4A-206ENST00000457035 NOS1P29475 1434 aa14.99□□□□□ -0.01
ATG4A-206ENST00000457035 IDI1Q13907 227 aa14.96□□□□□ -0.01
ATG4A-206ENST00000457035 MPHOSPH9Q99550 1183 aa14.96□□□□□ -0.01
ATG4A-206ENST00000457035 CEP170BQ9Y4F5 1589 aaPredicted RBP14.96□□□□□ -0.01
ATG4A-206ENST00000457035 LTBP4Q8N2S1 1624 aa14.95□□□□□ -0.02
ATG4A-206ENST00000457035 A2ML1A8K2U0 1454 aa14.95□□□□□ -0.02
ATG4A-206ENST00000457035 NLRP1Q9C000 1473 aa14.95□□□□□ -0.02
ATG4A-206ENST00000457035 PKD2Q13563 968 aa14.95□□□□□ -0.02
ATG4A-206ENST00000457035 SYNMO15061 1565 aa14.94□□□□□ -0.02
ATG4A-206ENST00000457035 SLC52A1Q9NWF4 448 aa14.94□□□□□ -0.02
ATG4A-206ENST00000457035 POLR1AO95602 1720 aaPredicted RBP14.93□□□□□ -0.02
ATG4A-206ENST00000457035 THEMISQ8N1K5 641 aaPredicted RBP14.92□□□□□ -0.02
ATG4A-206ENST00000457035 NCKAP5LQ9HCH0 1330 aa14.92□□□□□ -0.02
ATG4A-206ENST00000457035 UGGT1Q9NYU2 1555 aa14.9□□□□□ -0.02
ATG4A-206ENST00000457035 PLA2R1Q13018 1463 aa14.9□□□□□ -0.02
ATG4A-206ENST00000457035 SPHKAPQ2M3C7 1700 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms