RNA–Protein interactions for RNA: ENST00000456991.5

TMEM56-203, Transcript of transmembrane protein 56, humanhuman

TSL 3

Gene TMEM56, Length 992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-203ENST00000456991 WASHC2CQ9Y4E1 1318 aa34.19■■■■□ 3.06
TMEM56-203ENST00000456991 A2ML1A8K2U0 1454 aa34.19■■■■□ 3.06
TMEM56-203ENST00000456991 UBAP1LF5GYI3 381 aa34.18■■■■□ 3.06
TMEM56-203ENST00000456991 ILDR2Q71H61 639 aa34.18■■■■□ 3.06
TMEM56-203ENST00000456991 CAMSAP2Q08AD1 1489 aa34.17■■■■□ 3.06
TMEM56-203ENST00000456991 TNRQ92752 1358 aa34.16■■■■□ 3.06
TMEM56-203ENST00000456991 FAM135AQ9P2D6 1515 aa34.09■■■■□ 3.05
TMEM56-203ENST00000456991 PZPP20742 1482 aa34.09■■■■□ 3.05
TMEM56-203ENST00000456991 KDM5DQ9BY66 1539 aa34.09■■■■□ 3.05
TMEM56-203ENST00000456991 DNMT1P26358 1616 aaKnown RBP34.08■■■■□ 3.05
TMEM56-203ENST00000456991 SOCS7O14512 581 aa34.07■■■■□ 3.04
TMEM56-203ENST00000456991 THEMISQ8N1K5 641 aaPredicted RBP34.06■■■■□ 3.04
TMEM56-203ENST00000456991 ANKLE2Q86XL3 938 aa34.05■■■■□ 3.04
TMEM56-203ENST00000456991 MIA2Q96PC5 1412 aa34.04■■■■□ 3.04
TMEM56-203ENST00000456991 ARHGEF5Q12774 1597 aa34.03■■■■□ 3.04
TMEM56-203ENST00000456991 LRRC9Q6ZRR7 1453 aa34.01■■■■□ 3.03
TMEM56-203ENST00000456991 SPATA31D1Q6ZQQ2 1576 aa34■■■■□ 3.03
TMEM56-203ENST00000456991 VPS8Q8N3P4 1428 aa34■■■■□ 3.03
TMEM56-203ENST00000456991 LOC105371045A0A1W2PR82 267 aa33.99■■■■□ 3.03
TMEM56-203ENST00000456991 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.98■■■■□ 3.035e-6■■■■■ 46.2
TMEM56-203ENST00000456991 NLRP1Q9C000 1473 aa33.97■■■■□ 3.03
TMEM56-203ENST00000456991 KANK4Q5T7N3 995 aaPredicted RBP33.93■■■■□ 3.02
TMEM56-203ENST00000456991 TOM1O60784 492 aa33.92■■■■□ 3.02
TMEM56-203ENST00000456991 SHANK2Q9UPX8 1470 aa33.92■■■■□ 3.02
TMEM56-203ENST00000456991 CPS1P31327 1500 aa33.9■■■■□ 3.02
TMEM56-203ENST00000456991 NEURL4Q96JN8 1562 aa33.89■■■■□ 3.02
TMEM56-203ENST00000456991 UGGT1Q9NYU2 1555 aa33.89■■■■□ 3.02
TMEM56-203ENST00000456991 SCAF1Q9H7N4 1312 aaKnown RBP33.88■■■■□ 3.01
TMEM56-203ENST00000456991 PIP4K2BP78356 416 aa33.87■■■■□ 3.01
TMEM56-203ENST00000456991 MAP3K1Q13233 1512 aa33.86■■■■□ 3.01
TMEM56-203ENST00000456991 NPHP4O75161 1426 aaPredicted RBP33.85■■■■□ 3.01
TMEM56-203ENST00000456991 MAST1Q9Y2H9 1570 aa33.85■■■■□ 3.01
TMEM56-203ENST00000456991 MYOM3Q5VTT5 1437 aa33.84■■■■□ 3.01
TMEM56-203ENST00000456991 ABCC3O15438 1527 aa33.84■■■■□ 3.01
TMEM56-203ENST00000456991 MED14O60244 1454 aa33.83■■■■□ 3.01
TMEM56-203ENST00000456991 POLR1AO95602 1720 aaPredicted RBP33.83■■■■□ 3.01
TMEM56-203ENST00000456991 RNF17Q9BXT8 1623 aaKnown RBP33.82■■■■□ 3
TMEM56-203ENST00000456991 HSPA1LP34931 641 aa33.81■■■■□ 3
TMEM56-203ENST00000456991 ERVK-7P63135 1459 aa33.76■■■■□ 3
TMEM56-203ENST00000456991 DEPDC5O75140 1603 aa33.76■■■■□ 3
TMEM56-203ENST00000456991 VWDEQ8N2E2 1590 aa33.76■■■□□ 2.99
TMEM56-203ENST00000456991 EIF2AK4Q9P2K8 1649 aaKnown RBP33.75■■■□□ 2.99
TMEM56-203ENST00000456991 ZC3H13Q5T200 1668 aaKnown RBP33.74■■■□□ 2.99
TMEM56-203ENST00000456991 DUOX2Q9NRD8 1548 aa33.73■■■□□ 2.99
TMEM56-203ENST00000456991 APLP2Q06481 763 aa33.72■■■□□ 2.99
TMEM56-203ENST00000456991 RRP7BPQ9NSQ0 103 aa33.7■■■□□ 2.99
TMEM56-203ENST00000456991 KIF15Q9NS87 1388 aa33.7■■■□□ 2.98
TMEM56-203ENST00000456991 MROH1Q8NDA8 1641 aa33.68■■■□□ 2.98
TMEM56-203ENST00000456991 ABCC5O15440 1437 aa33.66■■■□□ 2.98
TMEM56-203ENST00000456991 IQGAP1P46940 1657 aa33.64■■■□□ 2.98
TMEM56-203ENST00000456991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.64■■■□□ 2.98
TMEM56-203ENST00000456991 ARHGAP31Q2M1Z3 1444 aa33.63■■■□□ 2.97
TMEM56-203ENST00000456991 TXNDC2Q86VQ3 553 aa33.63■■■□□ 2.97
TMEM56-203ENST00000456991 ERBINQ96RT1 1412 aa33.62■■■□□ 2.97
TMEM56-203ENST00000456991 LTKP29376 864 aa33.6■■■□□ 2.97
TMEM56-203ENST00000456991 LRRC7Q96NW7 1537 aa33.59■■■□□ 2.97
TMEM56-203ENST00000456991 SCAF11Q99590 1463 aaKnown RBP33.59■■■□□ 2.97
TMEM56-203ENST00000456991 EID1Q9Y6B2 187 aa33.59■■■□□ 2.97
TMEM56-203ENST00000456991 KANK1Q14678 1352 aa33.57■■■□□ 2.96
TMEM56-203ENST00000456991 PRDM15P57071 1507 aaPredicted RBP33.55■■■□□ 2.96
TMEM56-203ENST00000456991 CEP152O94986 1710 aa33.55■■■□□ 2.96
TMEM56-203ENST00000456991 DAPK1P53355 1430 aa33.54■■■□□ 2.96
TMEM56-203ENST00000456991 ARHGAP23Q9P227 1491 aa33.53■■■□□ 2.96
TMEM56-203ENST00000456991 STAG3Q9UJ98 1225 aa33.53■■■□□ 2.96
TMEM56-203ENST00000456991 PTPN23Q9H3S7 1636 aa33.53■■■□□ 2.96
TMEM56-203ENST00000456991 UBR1Q8IWV7 1749 aa33.52■■■□□ 2.96
TMEM56-203ENST00000456991 ALKQ9UM73 1620 aa33.52■■■□□ 2.96
TMEM56-203ENST00000456991 SLIT1O75093 1534 aa33.52■■■□□ 2.96
TMEM56-203ENST00000456991 MED1Q15648 1581 aaPredicted RBP33.51■■■□□ 2.96
TMEM56-203ENST00000456991 ANKRD30AQ9BXX3 1397 aa33.51■■■□□ 2.96
TMEM56-203ENST00000456991 CHIC2Q9UKJ5 165 aa33.51■■■□□ 2.95
TMEM56-203ENST00000456991 FGD6Q6ZV73 1430 aa33.51■■■□□ 2.95
TMEM56-203ENST00000456991 TMEM2Q9UHN6 1383 aa33.47■■■□□ 2.95
TMEM56-203ENST00000456991 CFAP65Q6ZU64 1925 aaKnown RBP33.47■■■□□ 2.95
TMEM56-203ENST00000456991 IDI1Q13907 227 aa33.46■■■□□ 2.95
TMEM56-203ENST00000456991 PHF23Q9BUL5 403 aaPredicted RBP33.46■■■□□ 2.95
TMEM56-203ENST00000456991 SENP3Q9H4L4 574 aaPredicted RBP33.46■■■□□ 2.95
TMEM56-203ENST00000456991 STRCP1A6NGW2 1772 aa33.46■■■□□ 2.95
TMEM56-203ENST00000456991 SYNMO15061 1565 aa33.46■■■□□ 2.95
TMEM56-203ENST00000456991 CROCC2H7BZ55 1655 aa33.43■■■□□ 2.94
TMEM56-203ENST00000456991 LMTK2Q8IWU2 1503 aa33.38■■■□□ 2.93
TMEM56-203ENST00000456991 PIK3C2BO00750 1634 aa33.35■■■□□ 2.93
TMEM56-203ENST00000456991 EFCAB6Q5THR3 1501 aa33.34■■■□□ 2.93
TMEM56-203ENST00000456991 SLC52A1Q9NWF4 448 aa33.34■■■□□ 2.93
TMEM56-203ENST00000456991 KCNA6P17658 529 aa33.33■■■□□ 2.93
TMEM56-203ENST00000456991 FAM50AQ14320 339 aaKnown RBP33.31■■■□□ 2.92
TMEM56-203ENST00000456991 SLC26A8Q96RN1 970 aa33.31■■■□□ 2.92
TMEM56-203ENST00000456991 NOS1P29475 1434 aa33.3■■■□□ 2.92
TMEM56-203ENST00000456991 TMEM94Q12767 1356 aa33.27■■■□□ 2.92
TMEM56-203ENST00000456991 PROSER2Q86WR7 435 aaPredicted RBP33.27■■■□□ 2.92
TMEM56-203ENST00000456991 KDM5AP29375 1690 aaKnown RBP33.26■■■□□ 2.92
TMEM56-203ENST00000456991 ADGRL2O95490 1459 aa33.26■■■□□ 2.92
TMEM56-203ENST00000456991 BCANQ96GW7 911 aa33.25■■■□□ 2.91
TMEM56-203ENST00000456991 FAM135BQ49AJ0 1406 aa33.25■■■□□ 2.91
TMEM56-203ENST00000456991 ANKRD50Q9ULJ7 1429 aa33.23■■■□□ 2.91
TMEM56-203ENST00000456991 TET3O43151 1660 aa33.2■■■□□ 2.91
TMEM56-203ENST00000456991 HDGFP51858 240 aaKnown RBP33.19■■■□□ 2.9
TMEM56-203ENST00000456991 RPRD2Q5VT52 1461 aaKnown RBP33.18■■■□□ 2.9
TMEM56-203ENST00000456991 ADGRB3O60242 1522 aa33.18■■■□□ 2.9
TMEM56-203ENST00000456991 RBM33Q96EV2 1170 aaKnown RBP33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms