RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 WASHC2CQ9Y4E1 1318 aa35.52■■■■□ 3.28
CBX3-204ENST00000456948 KIF15Q9NS87 1388 aa35.51■■■■□ 3.28
CBX3-204ENST00000456948 CHIC2Q9UKJ5 165 aa35.51■■■■□ 3.28
CBX3-204ENST00000456948 CLTCQ00610 1675 aaKnown RBP35.49■■■■□ 3.27
CBX3-204ENST00000456948 UHRF1BP1Q6BDS2 1440 aa35.49■■■■□ 3.27
CBX3-204ENST00000456948 ILDR1Q86SU0 546 aaPredicted RBP35.49■■■■□ 3.27
CBX3-204ENST00000456948 FAM135AQ9P2D6 1515 aa35.48■■■■□ 3.27
CBX3-204ENST00000456948 NPATQ14207 1427 aa35.46■■■■□ 3.27
CBX3-204ENST00000456948 EIF2AK4Q9P2K8 1649 aaKnown RBP35.45■■■■□ 3.27
CBX3-204ENST00000456948 ERBINQ96RT1 1412 aa35.42■■■■□ 3.26
CBX3-204ENST00000456948 KDM5DQ9BY66 1539 aa35.41■■■■□ 3.26
CBX3-204ENST00000456948 NCOA1Q15788 1441 aa35.4■■■■□ 3.26
CBX3-204ENST00000456948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.38■■■■□ 3.25
CBX3-204ENST00000456948 RNF17Q9BXT8 1623 aaKnown RBP35.36■■■■□ 3.25
CBX3-204ENST00000456948 ADGRL2O95490 1459 aa35.35■■■■□ 3.25
CBX3-204ENST00000456948 PTPRKQ15262 1439 aa35.32■■■■□ 3.25
CBX3-204ENST00000456948 KANK1Q14678 1352 aa35.31■■■■□ 3.24
CBX3-204ENST00000456948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.29■■■■□ 3.241e-7■■■□□ 17.9
CBX3-204ENST00000456948 ITGAEP38570 1179 aa35.28■■■■□ 3.24
CBX3-204ENST00000456948 ZC3H13Q5T200 1668 aaKnown RBP35.27■■■■□ 3.24
CBX3-204ENST00000456948 PZPP20742 1482 aa35.27■■■■□ 3.24
CBX3-204ENST00000456948 STRCQ7RTU9 1775 aa35.25■■■■□ 3.23
CBX3-204ENST00000456948 DMRT2Q9Y5R5 561 aa35.24■■■■□ 3.23
CBX3-204ENST00000456948 ROCK1Q13464 1354 aa35.24■■■■□ 3.23
CBX3-204ENST00000456948 ABCC3O15438 1527 aa35.23■■■■□ 3.23
CBX3-204ENST00000456948 ANKRD50Q9ULJ7 1429 aa35.22■■■■□ 3.23
CBX3-204ENST00000456948 FBXO31Q5XUX0 539 aaPredicted RBP35.21■■■■□ 3.23
CBX3-204ENST00000456948 TNRQ92752 1358 aa35.2■■■■□ 3.23
CBX3-204ENST00000456948 RRBP1Q9P2E9 1410 aaKnown RBP35.2■■■■□ 3.23
CBX3-204ENST00000456948 PRDM15P57071 1507 aaPredicted RBP35.18■■■■□ 3.22
CBX3-204ENST00000456948 MROH1Q8NDA8 1641 aa35.17■■■■□ 3.22
CBX3-204ENST00000456948 FBXO41Q8TF61 875 aa35.16■■■■□ 3.22
CBX3-204ENST00000456948 DEPDC5O75140 1603 aa35.14■■■■□ 3.22
CBX3-204ENST00000456948 MYO3AQ8NEV4 1616 aa35.14■■■■□ 3.22
CBX3-204ENST00000456948 CAMSAP1Q5T5Y3 1602 aa35.12■■■■□ 3.21
CBX3-204ENST00000456948 CEP152O94986 1710 aa35.12■■■■□ 3.21
CBX3-204ENST00000456948 CEP170BQ9Y4F5 1589 aaPredicted RBP35.1■■■■□ 3.21
CBX3-204ENST00000456948 A2ML1A8K2U0 1454 aa35.09■■■■□ 3.21
CBX3-204ENST00000456948 ARHGAP31Q2M1Z3 1444 aa35.09■■■■□ 3.21
CBX3-204ENST00000456948 ZNF142P52746 1687 aaPredicted RBP35.08■■■■□ 3.21
CBX3-204ENST00000456948 CERKQ8TCT0 537 aa35.07■■■■□ 3.2
CBX3-204ENST00000456948 NLRP1Q9C000 1473 aa35.07■■■■□ 3.2
CBX3-204ENST00000456948 PTPRTO14522 1441 aa35.06■■■■□ 3.2
CBX3-204ENST00000456948 THEMISQ8N1K5 641 aaPredicted RBP35.04■■■■□ 3.2
CBX3-204ENST00000456948 NCKAP5LQ9HCH0 1330 aa35.04■■■■□ 3.2
CBX3-204ENST00000456948 PKD2Q13563 968 aa35.03■■■■□ 3.2
CBX3-204ENST00000456948 ERVK-7P63135 1459 aa35.03■■■■□ 3.2
CBX3-204ENST00000456948 LMTK2Q8IWU2 1503 aa35.02■■■■□ 3.2
CBX3-204ENST00000456948 CFAP65Q6ZU64 1925 aaKnown RBP35.02■■■■□ 3.2
CBX3-204ENST00000456948 SPATA31D1Q6ZQQ2 1576 aa35.01■■■■□ 3.2
CBX3-204ENST00000456948 PLA2R1Q13018 1463 aa34.99■■■■□ 3.19
CBX3-204ENST00000456948 VWDEQ8N2E2 1590 aa34.99■■■■□ 3.19
CBX3-204ENST00000456948 UGGT1Q9NYU2 1555 aa34.93■■■■□ 3.18
CBX3-204ENST00000456948 ANKLE2Q86XL3 938 aa34.91■■■■□ 3.18
CBX3-204ENST00000456948 NUP155O75694 1391 aa34.9■■■■□ 3.18
CBX3-204ENST00000456948 UNC13BO14795 1591 aa34.9■■■■□ 3.18
CBX3-204ENST00000456948 STAG3Q9UJ98 1225 aa34.89■■■■□ 3.18
CBX3-204ENST00000456948 EFCAB6Q5THR3 1501 aa34.89■■■■□ 3.18
CBX3-204ENST00000456948 RPRD2Q5VT52 1461 aaKnown RBP34.89■■■■□ 3.18
CBX3-204ENST00000456948 SLC52A1Q9NWF4 448 aa34.84■■■■□ 3.17
CBX3-204ENST00000456948 TET3O43151 1660 aa34.84■■■■□ 3.17
CBX3-204ENST00000456948 NAIPQ13075 1403 aa34.81■■■■□ 3.16
CBX3-204ENST00000456948 HFM1A2PYH4 1435 aa34.79■■■■□ 3.16
CBX3-204ENST00000456948 NOS1P29475 1434 aa34.79■■■■□ 3.16
CBX3-204ENST00000456948 GCC2Q8IWJ2 1684 aa34.79■■■■□ 3.16
CBX3-204ENST00000456948 IQGAP3Q86VI3 1631 aa34.78■■■■□ 3.16
CBX3-204ENST00000456948 IDI1Q13907 227 aa34.77■■■■□ 3.16
CBX3-204ENST00000456948 ZNF335Q9H4Z2 1342 aaPredicted RBP34.77■■■■□ 3.16
CBX3-204ENST00000456948 LTBP4Q8N2S1 1624 aa34.77■■■■□ 3.16
CBX3-204ENST00000456948 EID1Q9Y6B2 187 aa34.75■■■■□ 3.15
CBX3-204ENST00000456948 POLR1AO95602 1720 aaPredicted RBP34.75■■■■□ 3.15
CBX3-204ENST00000456948 TRIM52Q96A61 297 aa34.72■■■■□ 3.15
CBX3-204ENST00000456948 UBR1Q8IWV7 1749 aa34.72■■■■□ 3.15
CBX3-204ENST00000456948 PIK3C2BO00750 1634 aa34.68■■■■□ 3.14
CBX3-204ENST00000456948 TXNDC2Q86VQ3 553 aa34.68■■■■□ 3.14
CBX3-204ENST00000456948 ACIN1Q9UKV3 1341 aaKnown RBP34.68■■■■□ 3.14
CBX3-204ENST00000456948 SYNMO15061 1565 aa34.67■■■■□ 3.14
CBX3-204ENST00000456948 NEURL4Q96JN8 1562 aa34.66■■■■□ 3.14
CBX3-204ENST00000456948 KDM5AP29375 1690 aaKnown RBP34.66■■■■□ 3.14
CBX3-204ENST00000456948 NPHP4O75161 1426 aaPredicted RBP34.65■■■■□ 3.14
CBX3-204ENST00000456948 E9PCH4 1651 aa34.65■■■■□ 3.14
CBX3-204ENST00000456948 HDGFP51858 240 aaKnown RBP34.64■■■■□ 3.14
CBX3-204ENST00000456948 MED14O60244 1454 aa34.64■■■■□ 3.14
CBX3-204ENST00000456948 TMEM2Q9UHN6 1383 aa34.62■■■■□ 3.13
CBX3-204ENST00000456948 SLIT1O75093 1534 aa34.62■■■■□ 3.13
CBX3-204ENST00000456948 SCAF11Q99590 1463 aaKnown RBP34.61■■■■□ 3.13
CBX3-204ENST00000456948 ARHGAP23Q9P227 1491 aa34.59■■■■□ 3.13
CBX3-204ENST00000456948 CHGAP10645 457 aaKnown RBP34.59■■■■□ 3.13
CBX3-204ENST00000456948 IQSEC2Q5JU85 1478 aa34.58■■■■□ 3.13
CBX3-204ENST00000456948 ADGRB3O60242 1522 aa34.57■■■■□ 3.12
CBX3-204ENST00000456948 SLC4A1APQ9BWU0 796 aaKnown RBP34.57■■■■□ 3.12
CBX3-204ENST00000456948 LTKP29376 864 aa34.56■■■■□ 3.12
CBX3-204ENST00000456948 IQGAP1P46940 1657 aa34.54■■■■□ 3.12
CBX3-204ENST00000456948 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.49■■■■□ 3.11
CBX3-204ENST00000456948 SETD5Q9C0A6 1442 aa34.48■■■■□ 3.11
CBX3-204ENST00000456948 PPP1R15AO75807 674 aaPredicted RBP34.48■■■■□ 3.11
CBX3-204ENST00000456948 BCANQ96GW7 911 aa34.48■■■■□ 3.11
CBX3-204ENST00000456948 UBAP1LF5GYI3 381 aa34.47■■■■□ 3.11
CBX3-204ENST00000456948 SPHKAPQ2M3C7 1700 aa34.46■■■■□ 3.11
CBX3-204ENST00000456948 CPS1P31327 1500 aa34.44■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms