RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 FAM135AQ9P2D6 1515 aa25.14■■□□□ 1.62
CPSF6-203ENST00000456847 RNF17Q9BXT8 1623 aaKnown RBP25.13■■□□□ 1.61
CPSF6-203ENST00000456847 DUOX2Q9NRD8 1548 aa25.12■■□□□ 1.61
CPSF6-203ENST00000456847 MYO3AQ8NEV4 1616 aa25.1■■□□□ 1.61
CPSF6-203ENST00000456847 PTPRKQ15262 1439 aa25.09■■□□□ 1.61
CPSF6-203ENST00000456847 FAM50AQ14320 339 aaKnown RBP25.09■■□□□ 1.61
CPSF6-203ENST00000456847 KIF15Q9NS87 1388 aa25.09■■□□□ 1.61
CPSF6-203ENST00000456847 WASHC2CQ9Y4E1 1318 aa25.07■■□□□ 1.6
CPSF6-203ENST00000456847 ZC3H13Q5T200 1668 aaKnown RBP25.07■■□□□ 1.6
CPSF6-203ENST00000456847 ZNF142P52746 1687 aaPredicted RBP25.05■■□□□ 1.6
CPSF6-203ENST00000456847 RRP7BPQ9NSQ0 103 aa25.05■■□□□ 1.6
CPSF6-203ENST00000456847 STRCQ7RTU9 1775 aa25.04■■□□□ 1.6
CPSF6-203ENST00000456847 CHIC2Q9UKJ5 165 aa25.04■■□□□ 1.6
CPSF6-203ENST00000456847 ERBINQ96RT1 1412 aa25.03■■□□□ 1.6
CPSF6-203ENST00000456847 MROH1Q8NDA8 1641 aa25.03■■□□□ 1.6
CPSF6-203ENST00000456847 ANKRD30AQ9BXX3 1397 aa25.03■■□□□ 1.6
CPSF6-203ENST00000456847 CEP152O94986 1710 aa25.03■■□□□ 1.6
CPSF6-203ENST00000456847 PZPP20742 1482 aa25.03■■□□□ 1.6
CPSF6-203ENST00000456847 CEP170BQ9Y4F5 1589 aaPredicted RBP25.02■■□□□ 1.6
CPSF6-203ENST00000456847 ABCC3O15438 1527 aa25.01■■□□□ 1.59
CPSF6-203ENST00000456847 PPARGC1BQ86YN6 1023 aaKnown RBP25.01■■□□□ 1.59
CPSF6-203ENST00000456847 CAMSAP1Q5T5Y3 1602 aa24.99■■□□□ 1.59
CPSF6-203ENST00000456847 TNRQ92752 1358 aa24.97■■□□□ 1.59
CPSF6-203ENST00000456847 PRDM15P57071 1507 aaPredicted RBP24.96■■□□□ 1.59
CPSF6-203ENST00000456847 ADGRL2O95490 1459 aa24.96■■□□□ 1.59
CPSF6-203ENST00000456847 FBXO31Q5XUX0 539 aaPredicted RBP24.95■■□□□ 1.58
CPSF6-203ENST00000456847 DEPDC5O75140 1603 aa24.95■■□□□ 1.58
CPSF6-203ENST00000456847 NCOA1Q15788 1441 aa24.95■■□□□ 1.58
CPSF6-203ENST00000456847 DMRT2Q9Y5R5 561 aa24.94■■□□□ 1.58
CPSF6-203ENST00000456847 A2ML1A8K2U0 1454 aa24.93■■□□□ 1.58
CPSF6-203ENST00000456847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.91■■□□□ 1.585e-7■□□□□ 11.3
CPSF6-203ENST00000456847 KANK1Q14678 1352 aa24.9■■□□□ 1.58
CPSF6-203ENST00000456847 CFAP65Q6ZU64 1925 aaKnown RBP24.9■■□□□ 1.58
CPSF6-203ENST00000456847 ILDR1Q86SU0 546 aaPredicted RBP24.88■■□□□ 1.57
CPSF6-203ENST00000456847 PTPRTO14522 1441 aa24.88■■□□□ 1.57
CPSF6-203ENST00000456847 PLA2R1Q13018 1463 aa24.88■■□□□ 1.57
CPSF6-203ENST00000456847 SPATA31D1Q6ZQQ2 1576 aa24.87■■□□□ 1.57
CPSF6-203ENST00000456847 ERVK-7P63135 1459 aa24.86■■□□□ 1.57
CPSF6-203ENST00000456847 NLRP1Q9C000 1473 aa24.86■■□□□ 1.57
CPSF6-203ENST00000456847 ANKRD50Q9ULJ7 1429 aa24.84■■□□□ 1.57
CPSF6-203ENST00000456847 ITGAEP38570 1179 aa24.83■■□□□ 1.57
CPSF6-203ENST00000456847 NCKAP5LQ9HCH0 1330 aa24.83■■□□□ 1.57
CPSF6-203ENST00000456847 POLR1AO95602 1720 aaPredicted RBP24.83■■□□□ 1.56
CPSF6-203ENST00000456847 UGGT1Q9NYU2 1555 aa24.81■■□□□ 1.56
CPSF6-203ENST00000456847 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.81■■□□□ 1.565e-6■□□□□ 8.7
CPSF6-203ENST00000456847 VWDEQ8N2E2 1590 aa24.8■■□□□ 1.56
CPSF6-203ENST00000456847 ARHGAP31Q2M1Z3 1444 aa24.8■■□□□ 1.56
CPSF6-203ENST00000456847 PKD2Q13563 968 aa24.8■■□□□ 1.56
CPSF6-203ENST00000456847 LMTK2Q8IWU2 1503 aa24.79■■□□□ 1.56
CPSF6-203ENST00000456847 ROCK1Q13464 1354 aa24.79■■□□□ 1.56
CPSF6-203ENST00000456847 CERKQ8TCT0 537 aa24.76■■□□□ 1.55
CPSF6-203ENST00000456847 FBXO41Q8TF61 875 aa24.76■■□□□ 1.55
CPSF6-203ENST00000456847 EFCAB6Q5THR3 1501 aa24.75■■□□□ 1.55
CPSF6-203ENST00000456847 THEMISQ8N1K5 641 aaPredicted RBP24.74■■□□□ 1.55
CPSF6-203ENST00000456847 UNC13BO14795 1591 aa24.74■■□□□ 1.55
CPSF6-203ENST00000456847 RRBP1Q9P2E9 1410 aaKnown RBP24.74■■□□□ 1.55
CPSF6-203ENST00000456847 UBR1Q8IWV7 1749 aa24.73■■□□□ 1.55
CPSF6-203ENST00000456847 NEURL4Q96JN8 1562 aa24.71■■□□□ 1.55
CPSF6-203ENST00000456847 TET3O43151 1660 aa24.7■■□□□ 1.55
CPSF6-203ENST00000456847 GCC2Q8IWJ2 1684 aa24.69■■□□□ 1.54
CPSF6-203ENST00000456847 ANKLE2Q86XL3 938 aa24.69■■□□□ 1.54
CPSF6-203ENST00000456847 PIK3C2BO00750 1634 aa24.68■■□□□ 1.54
CPSF6-203ENST00000456847 LTBP4Q8N2S1 1624 aa24.67■■□□□ 1.54
CPSF6-203ENST00000456847 SYNMO15061 1565 aa24.66■■□□□ 1.54
CPSF6-203ENST00000456847 IQGAP3Q86VI3 1631 aa24.64■■□□□ 1.54
CPSF6-203ENST00000456847 RPRD2Q5VT52 1461 aaKnown RBP24.64■■□□□ 1.53
CPSF6-203ENST00000456847 IQGAP1P46940 1657 aa24.63■■□□□ 1.53
CPSF6-203ENST00000456847 ZNF335Q9H4Z2 1342 aaPredicted RBP24.63■■□□□ 1.53
CPSF6-203ENST00000456847 STAG3Q9UJ98 1225 aa24.62■■□□□ 1.53
CPSF6-203ENST00000456847 NPHP4O75161 1426 aaPredicted RBP24.62■■□□□ 1.53
CPSF6-203ENST00000456847 NOS1P29475 1434 aa24.62■■□□□ 1.53
CPSF6-203ENST00000456847 KDM5AP29375 1690 aaKnown RBP24.6■■□□□ 1.53
CPSF6-203ENST00000456847 E9PCH4 1651 aa24.6■■□□□ 1.53
CPSF6-203ENST00000456847 MED14O60244 1454 aa24.6■■□□□ 1.53
CPSF6-203ENST00000456847 NUP155O75694 1391 aa24.58■■□□□ 1.53
CPSF6-203ENST00000456847 SLIT1O75093 1534 aa24.58■■□□□ 1.52
CPSF6-203ENST00000456847 SCAF11Q99590 1463 aaKnown RBP24.57■■□□□ 1.52
CPSF6-203ENST00000456847 ADGRB3O60242 1522 aa24.57■■□□□ 1.52
CPSF6-203ENST00000456847 ARHGAP23Q9P227 1491 aa24.56■■□□□ 1.52
CPSF6-203ENST00000456847 IQSEC2Q5JU85 1478 aa24.56■■□□□ 1.52
CPSF6-203ENST00000456847 IDI1Q13907 227 aa24.55■■□□□ 1.52
CPSF6-203ENST00000456847 SLC52A1Q9NWF4 448 aa24.53■■□□□ 1.52
CPSF6-203ENST00000456847 EID1Q9Y6B2 187 aa24.53■■□□□ 1.52
CPSF6-203ENST00000456847 NAIPQ13075 1403 aa24.52■■□□□ 1.52
CPSF6-203ENST00000456847 TXNDC2Q86VQ3 553 aa24.52■■□□□ 1.52
CPSF6-203ENST00000456847 TMEM2Q9UHN6 1383 aa24.51■■□□□ 1.51
CPSF6-203ENST00000456847 MYO5BQ9ULV0 1848 aa24.51■■□□□ 1.51
CPSF6-203ENST00000456847 CPS1P31327 1500 aa24.5■■□□□ 1.51
CPSF6-203ENST00000456847 LTKP29376 864 aa24.48■■□□□ 1.51
CPSF6-203ENST00000456847 HFM1A2PYH4 1435 aa24.47■■□□□ 1.51
CPSF6-203ENST00000456847 SPHKAPQ2M3C7 1700 aa24.46■■□□□ 1.51
CPSF6-203ENST00000456847 TMEM131LA2VDJ0 1609 aa24.45■■□□□ 1.5
CPSF6-203ENST00000456847 CHGAP10645 457 aaKnown RBP24.43■■□□□ 1.5
CPSF6-203ENST00000456847 STRCP1A6NGW2 1772 aa24.42■■□□□ 1.5
CPSF6-203ENST00000456847 TRIM52Q96A61 297 aa24.4■■□□□ 1.5
CPSF6-203ENST00000456847 RIMS2Q9UQ26 1411 aa24.37■■□□□ 1.49
CPSF6-203ENST00000456847 UBAP1LF5GYI3 381 aa24.37■■□□□ 1.49
CPSF6-203ENST00000456847 PPP1R15AO75807 674 aaPredicted RBP24.36■■□□□ 1.49
CPSF6-203ENST00000456847 BCANQ96GW7 911 aa24.36■■□□□ 1.49
CPSF6-203ENST00000456847 ZFYVE9O95405 1425 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms