RNA–Protein interactions for RNA: ENST00000456642.1

PPP6C-204, Transcript of protein phosphatase 6 catalytic subunit, humanhuman

TSL 3

Gene PPP6C, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6C-204ENST00000456642 MLH3Q9UHC1 1453 aa10.61□□□□□ -0.71
PPP6C-204ENST00000456642 EEA1Q15075 1411 aa10.61□□□□□ -0.71
PPP6C-204ENST00000456642 STAG3Q9UJ98 1225 aa10.61□□□□□ -0.71
PPP6C-204ENST00000456642 ATP1B4Q9UN42 357 aaPredicted RBP10.61□□□□□ -0.71
PPP6C-204ENST00000456642 CDC42BPAQ5VT25 1732 aa10.61□□□□□ -0.71
PPP6C-204ENST00000456642 ZNF335Q9H4Z2 1342 aaPredicted RBP10.59□□□□□ -0.71
PPP6C-204ENST00000456642 NCKAP5LQ9HCH0 1330 aa10.59□□□□□ -0.71
PPP6C-204ENST00000456642 PITPNM1O00562 1244 aa10.58□□□□□ -0.72
PPP6C-204ENST00000456642 SAMD9LQ8IVG5 1584 aa10.57□□□□□ -0.72
PPP6C-204ENST00000456642 IQSEC2Q5JU85 1478 aa10.57□□□□□ -0.72
PPP6C-204ENST00000456642 SUPT6HQ7KZ85 1726 aaKnown RBP10.57□□□□□ -0.72
PPP6C-204ENST00000456642 FMN1Q68DA7 1419 aa10.57□□□□□ -0.72
PPP6C-204ENST00000456642 MROH2AA6NES4 1674 aa10.57□□□□□ -0.72
PPP6C-204ENST00000456642 CLTCQ00610 1675 aaKnown RBP10.57□□□□□ -0.72
PPP6C-204ENST00000456642 MYO3AQ8NEV4 1616 aa10.56□□□□□ -0.72
PPP6C-204ENST00000456642 ZNF142P52746 1687 aaPredicted RBP10.56□□□□□ -0.72
PPP6C-204ENST00000456642 MYT1LQ9UL68 1186 aa10.55□□□□□ -0.72
PPP6C-204ENST00000456642 SYCP2Q9BX26 1530 aa10.54□□□□□ -0.72
PPP6C-204ENST00000456642 PLXNC1O60486 1568 aa10.54□□□□□ -0.72
PPP6C-204ENST00000456642 FXR2P51116 673 aaKnown RBP eCLIP10.54□□□□□ -0.72
PPP6C-204ENST00000456642 TCOF1Q13428 1488 aaKnown RBP10.54□□□□□ -0.72
PPP6C-204ENST00000456642 ZMYM3Q14202 1370 aa10.53□□□□□ -0.72
PPP6C-204ENST00000456642 NPATQ14207 1427 aa10.53□□□□□ -0.72
PPP6C-204ENST00000456642 PTPRKQ15262 1439 aa10.53□□□□□ -0.72
PPP6C-204ENST00000456642 UBAP1LF5GYI3 381 aa10.53□□□□□ -0.72
PPP6C-204ENST00000456642 ALKQ9UM73 1620 aa10.53□□□□□ -0.72
PPP6C-204ENST00000456642 MED1Q15648 1581 aaPredicted RBP10.52□□□□□ -0.72
PPP6C-204ENST00000456642 INO80Q9ULG1 1556 aaPredicted RBP10.52□□□□□ -0.72
PPP6C-204ENST00000456642 CEP170BQ9Y4F5 1589 aaPredicted RBP10.52□□□□□ -0.72
PPP6C-204ENST00000456642 CLIP1P30622 1438 aa10.52□□□□□ -0.73
PPP6C-204ENST00000456642 CNTLNQ9NXG0 1405 aa10.51□□□□□ -0.73
PPP6C-204ENST00000456642 PRR29P0C7W0 189 aa10.51□□□□□ -0.73
PPP6C-204ENST00000456642 UBTFP17480 764 aaKnown RBP10.51□□□□□ -0.73
PPP6C-204ENST00000456642 NEURL4Q96JN8 1562 aa10.51□□□□□ -0.73
PPP6C-204ENST00000456642 GPATCH8Q9UKJ3 1502 aaKnown RBP10.5□□□□□ -0.73
PPP6C-204ENST00000456642 VASPP50552 380 aaPredicted RBP10.5□□□□□ -0.73
PPP6C-204ENST00000456642 CDK11AQ9UQ88 783 aaPredicted RBP10.5□□□□□ -0.73
PPP6C-204ENST00000456642 CASKIN1Q8WXD9 1431 aa10.5□□□□□ -0.73
PPP6C-204ENST00000456642 PLA2R1Q13018 1463 aa10.49□□□□□ -0.73
PPP6C-204ENST00000456642 ATP7AQ04656 1500 aa10.49□□□□□ -0.73
PPP6C-204ENST00000456642 HAX1O00165 279 aa10.49□□□□□ -0.73
PPP6C-204ENST00000456642 HSPA1LP34931 641 aa10.49□□□□□ -0.73
PPP6C-204ENST00000456642 HNRNPMP52272 730 aaKnown RBP eCLIP10.49□□□□□ -0.73
PPP6C-204ENST00000456642 DNMT1P26358 1616 aaKnown RBP10.48□□□□□ -0.73
PPP6C-204ENST00000456642 ZNF777Q9ULD5 760 aaPredicted RBP10.48□□□□□ -0.73
PPP6C-204ENST00000456642 ESF1Q9H501 851 aaKnown RBP10.47□□□□□ -0.73
PPP6C-204ENST00000456642 A2MP01023 1474 aa10.47□□□□□ -0.73
PPP6C-204ENST00000456642 MIER1Q8N108 512 aa10.46□□□□□ -0.73
PPP6C-204ENST00000456642 SPAG9O60271 1321 aaKnown RBP10.46□□□□□ -0.73
PPP6C-204ENST00000456642 POLR1AO95602 1720 aaPredicted RBP10.46□□□□□ -0.74
PPP6C-204ENST00000456642 STRCP1A6NGW2 1772 aa10.46□□□□□ -0.74
PPP6C-204ENST00000456642 VWDEQ8N2E2 1590 aa10.45□□□□□ -0.74
PPP6C-204ENST00000456642 CCDC18Q5T9S5 1454 aa10.45□□□□□ -0.74
PPP6C-204ENST00000456642 ZNF644Q9H582 1327 aaPredicted RBP10.45□□□□□ -0.74
PPP6C-204ENST00000456642 ADGBQ8N7X0 1667 aa10.44□□□□□ -0.74
PPP6C-204ENST00000456642 FBXO31Q5XUX0 539 aaPredicted RBP10.44□□□□□ -0.74
PPP6C-204ENST00000456642 PLCD3Q8N3E9 789 aa10.44□□□□□ -0.74
PPP6C-204ENST00000456642 A2ML1A8K2U0 1454 aa10.43□□□□□ -0.74
PPP6C-204ENST00000456642 PIP4K2BP78356 416 aa10.43□□□□□ -0.74
PPP6C-204ENST00000456642 PKD2Q13563 968 aa10.43□□□□□ -0.74
PPP6C-204ENST00000456642 GGT6Q6P531 493 aa10.43□□□□□ -0.74
PPP6C-204ENST00000456642 FYCO1Q9BQS8 1478 aa10.42□□□□□ -0.74
PPP6C-204ENST00000456642 MBD5Q9P267 1494 aa10.42□□□□□ -0.74
PPP6C-204ENST00000456642 SHANK2Q9UPX8 1470 aa10.42□□□□□ -0.74
PPP6C-204ENST00000456642 KIAA1107Q9UPP5 1409 aa10.41□□□□□ -0.74
PPP6C-204ENST00000456642 TIAM1Q13009 1591 aa10.41□□□□□ -0.74
PPP6C-204ENST00000456642 EVX2Q03828 476 aa10.4□□□□□ -0.74
PPP6C-204ENST00000456642 IFNLR1Q8IU57 520 aaPredicted RBP10.39□□□□□ -0.75
PPP6C-204ENST00000456642 CREBZFQ9NS37 354 aa10.39□□□□□ -0.75
PPP6C-204ENST00000456642 CPS1P31327 1500 aa10.38□□□□□ -0.75
PPP6C-204ENST00000456642 TNRQ92752 1358 aa10.38□□□□□ -0.75
PPP6C-204ENST00000456642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.38□□□□□ -0.75
PPP6C-204ENST00000456642 CHADLQ6NUI6 762 aa10.37□□□□□ -0.75
PPP6C-204ENST00000456642 CFDP1Q9UEE9 299 aaPredicted RBP10.37□□□□□ -0.75
PPP6C-204ENST00000456642 RGS17Q9UGC6 210 aaPredicted RBP10.37□□□□□ -0.75
PPP6C-204ENST00000456642 PZPP20742 1482 aa10.36□□□□□ -0.75
PPP6C-204ENST00000456642 SRCAPQ6ZRS2 3230 aa10.36□□□□□ -0.75
PPP6C-204ENST00000456642 XIRP1Q702N8 1843 aaKnown RBP10.36□□□□□ -0.75
PPP6C-204ENST00000456642 CCNB3Q8WWL7 1395 aa10.36□□□□□ -0.75
PPP6C-204ENST00000456642 PLEKHH2Q8IVE3 1493 aa10.36□□□□□ -0.75
PPP6C-204ENST00000456642 CFAP65Q6ZU64 1925 aaKnown RBP10.35□□□□□ -0.75
PPP6C-204ENST00000456642 PLEKHG5O94827 1062 aa10.35□□□□□ -0.75
PPP6C-204ENST00000456642 KLHL34Q8N239 644 aa10.35□□□□□ -0.75
PPP6C-204ENST00000456642 DHX29Q7Z478 1369 aaKnown RBP10.35□□□□□ -0.75
PPP6C-204ENST00000456642 IQGAP1P46940 1657 aa10.34□□□□□ -0.75
PPP6C-204ENST00000456642 ZC3H13Q5T200 1668 aaKnown RBP10.34□□□□□ -0.75
PPP6C-204ENST00000456642 LRRC7Q96NW7 1537 aa10.34□□□□□ -0.75
PPP6C-204ENST00000456642 KDM5DQ9BY66 1539 aa10.34□□□□□ -0.75
PPP6C-204ENST00000456642 DEPDC5O75140 1603 aa10.34□□□□□ -0.75
PPP6C-204ENST00000456642 MED14O60244 1454 aa10.34□□□□□ -0.75
PPP6C-204ENST00000456642 NPHP4O75161 1426 aaPredicted RBP10.33□□□□□ -0.76
PPP6C-204ENST00000456642 KIF3BO15066 747 aa10.33□□□□□ -0.76
PPP6C-204ENST00000456642 UGGT1Q9NYU2 1555 aa10.32□□□□□ -0.76
PPP6C-204ENST00000456642 TOM1O60784 492 aa10.32□□□□□ -0.76
PPP6C-204ENST00000456642 PRKAR2AP13861 404 aaKnown RBP10.32□□□□□ -0.76
PPP6C-204ENST00000456642 MROH1Q8NDA8 1641 aa10.32□□□□□ -0.76
PPP6C-204ENST00000456642 RTEL1-TNFRSF6BF6WH68 1400 aa10.32□□□□□ -0.76
PPP6C-204ENST00000456642 MIA2Q96PC5 1412 aa10.32□□□□□ -0.76
PPP6C-204ENST00000456642 RNF17Q9BXT8 1623 aaKnown RBP10.31□□□□□ -0.76
PPP6C-204ENST00000456642 MTUS2Q5JR59 1369 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms