RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 LMTK3Q96Q04 1460 aa27.69■■■□□ 2.02
PDLIM2-215ENST00000456545 MROH2AA6NES4 1674 aa27.68■■■□□ 2.02
PDLIM2-215ENST00000456545 DUOX2Q9NRD8 1548 aa27.67■■■□□ 2.02
PDLIM2-215ENST00000456545 UHRF1BP1Q6BDS2 1440 aa27.66■■■□□ 2.02
PDLIM2-215ENST00000456545 PREX1Q8TCU6 1659 aa27.65■■■□□ 2.02
PDLIM2-215ENST00000456545 ITGAEP38570 1179 aa27.63■■■□□ 2.01
PDLIM2-215ENST00000456545 EIF2AK4Q9P2K8 1649 aaKnown RBP27.6■■■□□ 2.01
PDLIM2-215ENST00000456545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.6■■■□□ 2.01
PDLIM2-215ENST00000456545 NPATQ14207 1427 aa27.59■■■□□ 2.01
PDLIM2-215ENST00000456545 KDM5DQ9BY66 1539 aa27.59■■■□□ 2.01
PDLIM2-215ENST00000456545 NCOA1Q15788 1441 aa27.58■■■□□ 2.01
PDLIM2-215ENST00000456545 ERBINQ96RT1 1412 aa27.58■■■□□ 2
PDLIM2-215ENST00000456545 FAM135AQ9P2D6 1515 aa27.57■■■□□ 2
PDLIM2-215ENST00000456545 RNF17Q9BXT8 1623 aaKnown RBP27.55■■■□□ 2
PDLIM2-215ENST00000456545 PTPRKQ15262 1439 aa27.54■■■□□ 2
PDLIM2-215ENST00000456545 KANK1Q14678 1352 aa27.53■■■□□ 2
PDLIM2-215ENST00000456545 ADGRL2O95490 1459 aa27.52■■■□□ 2
PDLIM2-215ENST00000456545 FBXO31Q5XUX0 539 aaPredicted RBP27.52■■■□□ 2
PDLIM2-215ENST00000456545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.5■■□□□ 1.99
PDLIM2-215ENST00000456545 PZPP20742 1482 aa27.47■■□□□ 1.99
PDLIM2-215ENST00000456545 ABCC3O15438 1527 aa27.46■■□□□ 1.99
PDLIM2-215ENST00000456545 ZC3H13Q5T200 1668 aaKnown RBP27.46■■□□□ 1.99
PDLIM2-215ENST00000456545 TNRQ92752 1358 aa27.46■■□□□ 1.99
PDLIM2-215ENST00000456545 ANKRD50Q9ULJ7 1429 aa27.45■■□□□ 1.98
PDLIM2-215ENST00000456545 DMRT2Q9Y5R5 561 aa27.44■■□□□ 1.98
PDLIM2-215ENST00000456545 MROH1Q8NDA8 1641 aa27.43■■□□□ 1.98
PDLIM2-215ENST00000456545 CEP152O94986 1710 aa27.43■■□□□ 1.98
PDLIM2-215ENST00000456545 ROCK1Q13464 1354 aa27.43■■□□□ 1.98
PDLIM2-215ENST00000456545 RRBP1Q9P2E9 1410 aaKnown RBP27.41■■□□□ 1.98
PDLIM2-215ENST00000456545 MYO3AQ8NEV4 1616 aa27.41■■□□□ 1.98
PDLIM2-215ENST00000456545 PRDM15P57071 1507 aaPredicted RBP27.4■■□□□ 1.98
PDLIM2-215ENST00000456545 CFAP65Q6ZU64 1925 aaKnown RBP27.39■■□□□ 1.97
PDLIM2-215ENST00000456545 DEPDC5O75140 1603 aa27.38■■□□□ 1.97
PDLIM2-215ENST00000456545 CAMSAP1Q5T5Y3 1602 aa27.38■■□□□ 1.97
PDLIM2-215ENST00000456545 CEP170BQ9Y4F5 1589 aaPredicted RBP27.36■■□□□ 1.97
PDLIM2-215ENST00000456545 A2ML1A8K2U0 1454 aa27.35■■□□□ 1.97
PDLIM2-215ENST00000456545 ZNF142P52746 1687 aaPredicted RBP27.32■■□□□ 1.96
PDLIM2-215ENST00000456545 STRCQ7RTU9 1775 aa27.32■■□□□ 1.96
PDLIM2-215ENST00000456545 THEMISQ8N1K5 641 aaPredicted RBP27.31■■□□□ 1.96
PDLIM2-215ENST00000456545 NCKAP5LQ9HCH0 1330 aa27.31■■□□□ 1.96
PDLIM2-215ENST00000456545 ARHGAP31Q2M1Z3 1444 aa27.31■■□□□ 1.96
PDLIM2-215ENST00000456545 ERVK-7P63135 1459 aa27.31■■□□□ 1.96
PDLIM2-215ENST00000456545 NLRP1Q9C000 1473 aa27.3■■□□□ 1.96
PDLIM2-215ENST00000456545 PKD2Q13563 968 aa27.29■■□□□ 1.96
PDLIM2-215ENST00000456545 SPATA31D1Q6ZQQ2 1576 aa27.28■■□□□ 1.96
PDLIM2-215ENST00000456545 LMTK2Q8IWU2 1503 aa27.26■■□□□ 1.96
PDLIM2-215ENST00000456545 VWDEQ8N2E2 1590 aa27.26■■□□□ 1.95
PDLIM2-215ENST00000456545 UGGT1Q9NYU2 1555 aa27.24■■□□□ 1.95
PDLIM2-215ENST00000456545 STAG3Q9UJ98 1225 aa27.24■■□□□ 1.95
PDLIM2-215ENST00000456545 PLA2R1Q13018 1463 aa27.24■■□□□ 1.95
PDLIM2-215ENST00000456545 PTPRTO14522 1441 aa27.24■■□□□ 1.95
PDLIM2-215ENST00000456545 NUP155O75694 1391 aa27.23■■□□□ 1.95
PDLIM2-215ENST00000456545 ANKLE2Q86XL3 938 aa27.22■■□□□ 1.95
PDLIM2-215ENST00000456545 UNC13BO14795 1591 aa27.2■■□□□ 1.94
PDLIM2-215ENST00000456545 EFCAB6Q5THR3 1501 aa27.19■■□□□ 1.94
PDLIM2-215ENST00000456545 TET3O43151 1660 aa27.15■■□□□ 1.94
PDLIM2-215ENST00000456545 TRIM52Q96A61 297 aa27.15■■□□□ 1.94
PDLIM2-215ENST00000456545 NAIPQ13075 1403 aa27.15■■□□□ 1.94
PDLIM2-215ENST00000456545 IDI1Q13907 227 aa27.14■■□□□ 1.94
PDLIM2-215ENST00000456545 RPRD2Q5VT52 1461 aaKnown RBP27.13■■□□□ 1.93
PDLIM2-215ENST00000456545 SLC52A1Q9NWF4 448 aa27.13■■□□□ 1.93
PDLIM2-215ENST00000456545 GCC2Q8IWJ2 1684 aa27.12■■□□□ 1.93
PDLIM2-215ENST00000456545 CERKQ8TCT0 537 aa27.11■■□□□ 1.93
PDLIM2-215ENST00000456545 IQGAP3Q86VI3 1631 aa27.11■■□□□ 1.93
PDLIM2-215ENST00000456545 NOS1P29475 1434 aa27.1■■□□□ 1.93
PDLIM2-215ENST00000456545 HFM1A2PYH4 1435 aa27.09■■□□□ 1.93
PDLIM2-215ENST00000456545 EID1Q9Y6B2 187 aa27.09■■□□□ 1.93
PDLIM2-215ENST00000456545 POLR1AO95602 1720 aaPredicted RBP27.08■■□□□ 1.93
PDLIM2-215ENST00000456545 UBR1Q8IWV7 1749 aa27.08■■□□□ 1.93
PDLIM2-215ENST00000456545 ILDR1Q86SU0 546 aaPredicted RBP27.07■■□□□ 1.92
PDLIM2-215ENST00000456545 TXNDC2Q86VQ3 553 aa27.07■■□□□ 1.92
PDLIM2-215ENST00000456545 PIK3C2BO00750 1634 aa27.07■■□□□ 1.92
PDLIM2-215ENST00000456545 SYNMO15061 1565 aa27.05■■□□□ 1.92
PDLIM2-215ENST00000456545 CHGAP10645 457 aaKnown RBP27.05■■□□□ 1.92
PDLIM2-215ENST00000456545 E9PCH4 1651 aa27.04■■□□□ 1.92
PDLIM2-215ENST00000456545 NPHP4O75161 1426 aaPredicted RBP27.03■■□□□ 1.92
PDLIM2-215ENST00000456545 FBXO41Q8TF61 875 aa27.03■■□□□ 1.92
PDLIM2-215ENST00000456545 ZNF335Q9H4Z2 1342 aaPredicted RBP27.01■■□□□ 1.91
PDLIM2-215ENST00000456545 NEURL4Q96JN8 1562 aa26.99■■□□□ 1.91
PDLIM2-215ENST00000456545 TMEM2Q9UHN6 1383 aa26.98■■□□□ 1.91
PDLIM2-215ENST00000456545 LTKP29376 864 aa26.98■■□□□ 1.91
PDLIM2-215ENST00000456545 HDGFP51858 240 aaKnown RBP26.98■■□□□ 1.91
PDLIM2-215ENST00000456545 SLC4A1APQ9BWU0 796 aaKnown RBP26.98■■□□□ 1.91
PDLIM2-215ENST00000456545 SCAF11Q99590 1463 aaKnown RBP26.98■■□□□ 1.91
PDLIM2-215ENST00000456545 MED14O60244 1454 aa26.97■■□□□ 1.91
PDLIM2-215ENST00000456545 SLIT1O75093 1534 aa26.96■■□□□ 1.91
PDLIM2-215ENST00000456545 KDM5AP29375 1690 aaKnown RBP26.96■■□□□ 1.91
PDLIM2-215ENST00000456545 BCANQ96GW7 911 aa26.96■■□□□ 1.91
PDLIM2-215ENST00000456545 ADGRB3O60242 1522 aa26.95■■□□□ 1.9
PDLIM2-215ENST00000456545 ARHGAP23Q9P227 1491 aa26.94■■□□□ 1.9
PDLIM2-215ENST00000456545 IQGAP1P46940 1657 aa26.93■■□□□ 1.9
PDLIM2-215ENST00000456545 LTBP4Q8N2S1 1624 aa26.92■■□□□ 1.9
PDLIM2-215ENST00000456545 PPP1R15AO75807 674 aaPredicted RBP26.92■■□□□ 1.9
PDLIM2-215ENST00000456545 ACIN1Q9UKV3 1341 aaKnown RBP26.9■■□□□ 1.9
PDLIM2-215ENST00000456545 SETD5Q9C0A6 1442 aa26.9■■□□□ 1.9
PDLIM2-215ENST00000456545 SPHKAPQ2M3C7 1700 aa26.87■■□□□ 1.89
PDLIM2-215ENST00000456545 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.87■■□□□ 1.89
PDLIM2-215ENST00000456545 SENP3Q9H4L4 574 aaPredicted RBP26.87■■□□□ 1.89
PDLIM2-215ENST00000456545 MYO5BQ9ULV0 1848 aa26.86■■□□□ 1.89
PDLIM2-215ENST00000456545 ZNF326Q5BKZ1 582 aaKnown RBP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms