RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 DEPDC5O75140 1603 aa24.43■■□□□ 1.5
PDXDC1-204ENST00000455313 FAM135AQ9P2D6 1515 aa24.43■■□□□ 1.5
PDXDC1-204ENST00000455313 IQGAP3Q86VI3 1631 aa24.42■■□□□ 1.5
PDXDC1-204ENST00000455313 SIN3AQ96ST3 1273 aa24.4■■□□□ 1.5
PDXDC1-204ENST00000455313 COL17A1Q9UMD9 1497 aaPredicted RBP24.4■■□□□ 1.5
PDXDC1-204ENST00000455313 FOXD1Q16676 465 aa24.4■■□□□ 1.5
PDXDC1-204ENST00000455313 YEATS2Q9ULM3 1422 aa24.39■■□□□ 1.5
PDXDC1-204ENST00000455313 TRHP20396 242 aaPredicted RBP24.37■■□□□ 1.49
PDXDC1-204ENST00000455313 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.37■■□□□ 1.492e-7■■□□□ 12.1
PDXDC1-204ENST00000455313 PKD2Q13563 968 aa24.36■■□□□ 1.49
PDXDC1-204ENST00000455313 MROH1Q8NDA8 1641 aa24.35■■□□□ 1.49
PDXDC1-204ENST00000455313 PRDM15P57071 1507 aaPredicted RBP24.35■■□□□ 1.49
PDXDC1-204ENST00000455313 ANKRD30BQ9BXX2 1392 aa24.35■■□□□ 1.49
PDXDC1-204ENST00000455313 KIF3BO15066 747 aa24.35■■□□□ 1.49
PDXDC1-204ENST00000455313 NEUROD1Q13562 356 aa24.35■■□□□ 1.49
PDXDC1-204ENST00000455313 BCORL1Q5H9F3 1711 aa24.34■■□□□ 1.49
PDXDC1-204ENST00000455313 RNF17Q9BXT8 1623 aaKnown RBP24.34■■□□□ 1.49
PDXDC1-204ENST00000455313 VWDEQ8N2E2 1590 aa24.31■■□□□ 1.48
PDXDC1-204ENST00000455313 ARHGEF40Q8TER5 1519 aa24.27■■□□□ 1.48
PDXDC1-204ENST00000455313 KANK1Q14678 1352 aa24.26■■□□□ 1.47
PDXDC1-204ENST00000455313 ATP10AO60312 1499 aa24.26■■□□□ 1.47
PDXDC1-204ENST00000455313 REREQ9P2R6 1566 aa24.25■■□□□ 1.47
PDXDC1-204ENST00000455313 TET3O43151 1660 aa24.25■■□□□ 1.47
PDXDC1-204ENST00000455313 RPRD2Q5VT52 1461 aaKnown RBP24.25■■□□□ 1.47
PDXDC1-204ENST00000455313 TIMELESSQ9UNS1 1208 aa24.25■■□□□ 1.47
PDXDC1-204ENST00000455313 TONSLQ96HA7 1378 aa24.23■■□□□ 1.47
PDXDC1-204ENST00000455313 E9PCH4 1651 aa24.23■■□□□ 1.47
PDXDC1-204ENST00000455313 CEP152O94986 1710 aa24.21■■□□□ 1.47
PDXDC1-204ENST00000455313 LMTK2Q8IWU2 1503 aa24.19■■□□□ 1.46
PDXDC1-204ENST00000455313 SIGLEC1Q9BZZ2 1709 aa24.18■■□□□ 1.46
PDXDC1-204ENST00000455313 GGT6Q6P531 493 aa24.18■■□□□ 1.46
PDXDC1-204ENST00000455313 EFCAB6Q5THR3 1501 aa24.18■■□□□ 1.46
PDXDC1-204ENST00000455313 AGLP35573 1532 aa24.17■■□□□ 1.46
PDXDC1-204ENST00000455313 PLA2R1Q13018 1463 aa24.17■■□□□ 1.46
PDXDC1-204ENST00000455313 ABCC3O15438 1527 aa24.15■■□□□ 1.46
PDXDC1-204ENST00000455313 SPHKAPQ2M3C7 1700 aa24.13■■□□□ 1.45
PDXDC1-204ENST00000455313 ZC3H13Q5T200 1668 aaKnown RBP24.12■■□□□ 1.45
PDXDC1-204ENST00000455313 CCDC144AA2RUR9 1427 aa24.11■■□□□ 1.45
PDXDC1-204ENST00000455313 CAMSAP1Q5T5Y3 1602 aa24.1■■□□□ 1.45
PDXDC1-204ENST00000455313 TRPM2O94759 1503 aa24.09■■□□□ 1.45
PDXDC1-204ENST00000455313 PPP1R15AO75807 674 aaPredicted RBP24.09■■□□□ 1.45
PDXDC1-204ENST00000455313 WASHC2CQ9Y4E1 1318 aa24.09■■□□□ 1.45
PDXDC1-204ENST00000455313 PTPRTO14522 1441 aa24.08■■□□□ 1.45
PDXDC1-204ENST00000455313 L3MBTL2Q969R5 705 aa24.07■■□□□ 1.44
PDXDC1-204ENST00000455313 NPATQ14207 1427 aa24.06■■□□□ 1.44
PDXDC1-204ENST00000455313 CLTCL1P53675 1640 aa24.02■■□□□ 1.44
PDXDC1-204ENST00000455313 CFAP65Q6ZU64 1925 aaKnown RBP24■■□□□ 1.43
PDXDC1-204ENST00000455313 ARHGAP31Q2M1Z3 1444 aa24■■□□□ 1.43
PDXDC1-204ENST00000455313 CLTCQ00610 1675 aaKnown RBP23.97■■□□□ 1.43
PDXDC1-204ENST00000455313 PPP6R1Q9UPN7 881 aa23.97■■□□□ 1.43
PDXDC1-204ENST00000455313 UGGT1Q9NYU2 1555 aa23.97■■□□□ 1.43
PDXDC1-204ENST00000455313 MLECQ14165 292 aa23.96■■□□□ 1.43
PDXDC1-204ENST00000455313 CNTLNQ9NXG0 1405 aa23.94■■□□□ 1.42
PDXDC1-204ENST00000455313 ARID4BQ4LE39 1312 aaPredicted RBP23.94■■□□□ 1.42
PDXDC1-204ENST00000455313 NOS1P29475 1434 aa23.93■■□□□ 1.42
PDXDC1-204ENST00000455313 SPATA31E1Q6ZUB1 1445 aa23.93■■□□□ 1.42
PDXDC1-204ENST00000455313 PREX1Q8TCU6 1659 aa23.91■■□□□ 1.42
PDXDC1-204ENST00000455313 SYNMO15061 1565 aa23.91■■□□□ 1.42
PDXDC1-204ENST00000455313 KIF1BO60333 1816 aa23.89■■□□□ 1.42
PDXDC1-204ENST00000455313 NEURL4Q96JN8 1562 aa23.89■■□□□ 1.41
PDXDC1-204ENST00000455313 RGL3Q3MIN7 710 aa23.89■■□□□ 1.41
PDXDC1-204ENST00000455313 NBPF8Q3BBV2 869 aa23.88■■□□□ 1.41
PDXDC1-204ENST00000455313 ZNF316A6NFI3 1004 aaPredicted RBP23.88■■□□□ 1.41
PDXDC1-204ENST00000455313 PIK3C2BO00750 1634 aa23.88■■□□□ 1.41
PDXDC1-204ENST00000455313 DCAF11Q8TEB1 546 aa23.87■■□□□ 1.41
PDXDC1-204ENST00000455313 UHRF1BP1Q6BDS2 1440 aa23.86■■□□□ 1.41
PDXDC1-204ENST00000455313 MROH2AA6NES4 1674 aa23.85■■□□□ 1.41
PDXDC1-204ENST00000455313 ERVK-7P63135 1459 aa23.85■■□□□ 1.41
PDXDC1-204ENST00000455313 ADGRB3O60242 1522 aa23.84■■□□□ 1.41
PDXDC1-204ENST00000455313 ESF1Q9H501 851 aaKnown RBP23.83■■□□□ 1.41
PDXDC1-204ENST00000455313 ZNF326Q5BKZ1 582 aaKnown RBP23.82■■□□□ 1.4
PDXDC1-204ENST00000455313 KDM2AQ9Y2K7 1162 aa23.82■■□□□ 1.4
PDXDC1-204ENST00000455313 FBXO31Q5XUX0 539 aaPredicted RBP23.81■■□□□ 1.4
PDXDC1-204ENST00000455313 SPATA31D1Q6ZQQ2 1576 aa23.8■■□□□ 1.4
PDXDC1-204ENST00000455313 PRAG1Q86YV5 1406 aa23.8■■□□□ 1.4
PDXDC1-204ENST00000455313 ZMYM3Q14202 1370 aa23.79■■□□□ 1.4
PDXDC1-204ENST00000455313 FER1L4A9Z1Z3 1794 aa23.78■■□□□ 1.4
PDXDC1-204ENST00000455313 RALGAPBQ86X10 1494 aa23.78■■□□□ 1.4
PDXDC1-204ENST00000455313 IFT172Q9UG01 1749 aa23.77■■□□□ 1.4
PDXDC1-204ENST00000455313 SLC52A1Q9NWF4 448 aa23.75■■□□□ 1.39
PDXDC1-204ENST00000455313 TRPM1Q7Z4N2 1603 aa23.75■■□□□ 1.39
PDXDC1-204ENST00000455313 MADDQ8WXG6 1647 aa23.74■■□□□ 1.39
PDXDC1-204ENST00000455313 IDI1Q13907 227 aa23.74■■□□□ 1.39
PDXDC1-204ENST00000455313 CHGAP10645 457 aaKnown RBP23.73■■□□□ 1.39
PDXDC1-204ENST00000455313 TMEM131LA2VDJ0 1609 aa23.71■■□□□ 1.39
PDXDC1-204ENST00000455313 MYOM2P54296 1465 aa23.71■■□□□ 1.39
PDXDC1-204ENST00000455313 MYO5BQ9ULV0 1848 aa23.71■■□□□ 1.39
PDXDC1-204ENST00000455313 PPLO60437 1756 aa23.71■■□□□ 1.39
PDXDC1-204ENST00000455313 STAC3Q96MF2 364 aa23.7■■□□□ 1.38
PDXDC1-204ENST00000455313 C3P01024 1663 aa23.69■■□□□ 1.38
PDXDC1-204ENST00000455313 HIRIP3Q9BW71 556 aaPredicted RBP23.68■■□□□ 1.38
PDXDC1-204ENST00000455313 EIF4G2P78344 907 aaKnown RBP eCLIP23.67■■□□□ 1.38
PDXDC1-204ENST00000455313 ROCK2O75116 1388 aaKnown RBP23.66■■□□□ 1.38
PDXDC1-204ENST00000455313 NEXMIFQ5QGS0 1516 aa23.65■■□□□ 1.38
PDXDC1-204ENST00000455313 HSPA5P11021 654 aaKnown RBP23.65■■□□□ 1.38
PDXDC1-204ENST00000455313 NRXN1Q9ULB1 1477 aa23.64■■□□□ 1.38
PDXDC1-204ENST00000455313 TNRQ92752 1358 aa23.64■■□□□ 1.37
PDXDC1-204ENST00000455313 RPGRIP1LQ68CZ1 1315 aa23.64■■□□□ 1.37
PDXDC1-204ENST00000455313 ADAMTSL3P82987 1691 aa23.63■■□□□ 1.37
PDXDC1-204ENST00000455313 GPRASP1Q5JY77 1395 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms