RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 CNTLNQ9NXG0 1405 aa14.21□□□□□ -0.13
ATXN3-205ENST00000454964 KANK1Q14678 1352 aa14.21□□□□□ -0.14
ATXN3-205ENST00000454964 TRIM26Q12899 539 aaPredicted RBP14.2□□□□□ -0.14
ATXN3-205ENST00000454964 ANKRD50Q9ULJ7 1429 aa14.19□□□□□ -0.14
ATXN3-205ENST00000454964 SETD1BQ9UPS6 1966 aaKnown RBP14.18□□□□□ -0.14
ATXN3-205ENST00000454964 HRCP23327 699 aa14.18□□□□□ -0.14
ATXN3-205ENST00000454964 GGT6Q6P531 493 aa14.18□□□□□ -0.14
ATXN3-205ENST00000454964 HFM1A2PYH4 1435 aa14.16□□□□□ -0.14
ATXN3-205ENST00000454964 WASHC2CQ9Y4E1 1318 aa14.15□□□□□ -0.14
ATXN3-205ENST00000454964 PTPRKQ15262 1439 aa14.15□□□□□ -0.14
ATXN3-205ENST00000454964 ADAMTSL3P82987 1691 aa14.14□□□□□ -0.15
ATXN3-205ENST00000454964 MLECQ14165 292 aa14.14□□□□□ -0.15
ATXN3-205ENST00000454964 RNF17Q9BXT8 1623 aaKnown RBP14.13□□□□□ -0.15
ATXN3-205ENST00000454964 FER1L4A9Z1Z3 1794 aa14.13□□□□□ -0.15
ATXN3-205ENST00000454964 ZC3H13Q5T200 1668 aaKnown RBP14.13□□□□□ -0.15
ATXN3-205ENST00000454964 MROH2AA6NES4 1674 aa14.12□□□□□ -0.15
ATXN3-205ENST00000454964 GCC2Q8IWJ2 1684 aa14.11□□□□□ -0.15
ATXN3-205ENST00000454964 NAIPQ13075 1403 aa14.11□□□□□ -0.15
ATXN3-205ENST00000454964 SETD5Q9C0A6 1442 aa14.1□□□□□ -0.15
ATXN3-205ENST00000454964 DEPDC5O75140 1603 aa14.1□□□□□ -0.15
ATXN3-205ENST00000454964 KDM5DQ9BY66 1539 aa14.1□□□□□ -0.15
ATXN3-205ENST00000454964 KDM4FA0A1W2PPD8 638 aa14.09□□□□□ -0.15
ATXN3-205ENST00000454964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.08□□□□□ -0.16
ATXN3-205ENST00000454964 ZMYM3Q14202 1370 aa14.08□□□□□ -0.16
ATXN3-205ENST00000454964 PRDM15P57071 1507 aaPredicted RBP14.07□□□□□ -0.16
ATXN3-205ENST00000454964 SIGLEC1Q9BZZ2 1709 aa14.07□□□□□ -0.16
ATXN3-205ENST00000454964 MADDQ8WXG6 1647 aa14.06□□□□□ -0.16
ATXN3-205ENST00000454964 TRIM52Q96A61 297 aa14.06□□□□□ -0.16
ATXN3-205ENST00000454964 NUP155O75694 1391 aa14.06□□□□□ -0.16
ATXN3-205ENST00000454964 ARHGAP31Q2M1Z3 1444 aa14.06□□□□□ -0.16
ATXN3-205ENST00000454964 NPATQ14207 1427 aa14.05□□□□□ -0.16
ATXN3-205ENST00000454964 PTPRMP28827 1452 aa14.05□□□□□ -0.16
ATXN3-205ENST00000454964 RPRD2Q5VT52 1461 aaKnown RBP14.05□□□□□ -0.16
ATXN3-205ENST00000454964 LMTK2Q8IWU2 1503 aa14.05□□□□□ -0.16
ATXN3-205ENST00000454964 UNC13BO14795 1591 aa14.05□□□□□ -0.16
ATXN3-205ENST00000454964 CLTCQ00610 1675 aaKnown RBP14.04□□□□□ -0.16
ATXN3-205ENST00000454964 RIMS1Q86UR5 1692 aaKnown RBP14.04□□□□□ -0.16
ATXN3-205ENST00000454964 VWDEQ8N2E2 1590 aa14.02□□□□□ -0.16
ATXN3-205ENST00000454964 IQGAP3Q86VI3 1631 aa14.01□□□□□ -0.17
ATXN3-205ENST00000454964 ABCC3O15438 1527 aa14.01□□□□□ -0.17
ATXN3-205ENST00000454964 PZPP20742 1482 aa14.01□□□□□ -0.17
ATXN3-205ENST00000454964 TET3O43151 1660 aa14.01□□□□□ -0.17
ATXN3-205ENST00000454964 MROH1Q8NDA8 1641 aa14.01□□□□□ -0.17
ATXN3-205ENST00000454964 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
ATXN3-205ENST00000454964 SLC52A1Q9NWF4 448 aa14□□□□□ -0.17
ATXN3-205ENST00000454964 C3P01024 1663 aa14□□□□□ -0.17
ATXN3-205ENST00000454964 CFAP65Q6ZU64 1925 aaKnown RBP14□□□□□ -0.17
ATXN3-205ENST00000454964 RAB3GAP2Q9H2M9 1393 aa13.99□□□□□ -0.17
ATXN3-205ENST00000454964 CEP152O94986 1710 aa13.99□□□□□ -0.17
ATXN3-205ENST00000454964 PPP4R3CPQ6ZMV5 832 aa13.99□□□□□ -0.17
ATXN3-205ENST00000454964 CAMSAP1Q5T5Y3 1602 aa13.99□□□□□ -0.17
ATXN3-205ENST00000454964 HDGFP51858 240 aaKnown RBP13.96□□□□□ -0.17
ATXN3-205ENST00000454964 MPHOSPH9Q99550 1183 aa13.96□□□□□ -0.17
ATXN3-205ENST00000454964 EFCAB6Q5THR3 1501 aa13.95□□□□□ -0.18
ATXN3-205ENST00000454964 NLRP1Q9C000 1473 aa13.94□□□□□ -0.18
ATXN3-205ENST00000454964 CEBPAP49715 358 aaPredicted RBP13.94□□□□□ -0.18
ATXN3-205ENST00000454964 UHRF1BP1Q6BDS2 1440 aa13.94□□□□□ -0.18
ATXN3-205ENST00000454964 TNRQ92752 1358 aa13.94□□□□□ -0.18
ATXN3-205ENST00000454964 THEMISQ8N1K5 641 aaPredicted RBP13.93□□□□□ -0.18
ATXN3-205ENST00000454964 PREX1Q8TCU6 1659 aa13.93□□□□□ -0.18
ATXN3-205ENST00000454964 SPATA31D1Q6ZQQ2 1576 aa13.92□□□□□ -0.18
ATXN3-205ENST00000454964 PKD2Q13563 968 aa13.92□□□□□ -0.18
ATXN3-205ENST00000454964 STAG3Q9UJ98 1225 aa13.91□□□□□ -0.18
ATXN3-205ENST00000454964 ERVK-7P63135 1459 aa13.91□□□□□ -0.18
ATXN3-205ENST00000454964 NOS1P29475 1434 aa13.9□□□□□ -0.18
ATXN3-205ENST00000454964 FBXO31Q5XUX0 539 aaPredicted RBP13.9□□□□□ -0.18
ATXN3-205ENST00000454964 E9PCH4 1651 aa13.9□□□□□ -0.18
ATXN3-205ENST00000454964 KDM5AP29375 1690 aaKnown RBP13.9□□□□□ -0.18
ATXN3-205ENST00000454964 PCGF6Q9BYE7 350 aa13.89□□□□□ -0.19
ATXN3-205ENST00000454964 DMRT2Q9Y5R5 561 aa13.88□□□□□ -0.19
ATXN3-205ENST00000454964 PTPRTO14522 1441 aa13.88□□□□□ -0.19
ATXN3-205ENST00000454964 A2ML1A8K2U0 1454 aa13.87□□□□□ -0.19
ATXN3-205ENST00000454964 SPHKAPQ2M3C7 1700 aa13.87□□□□□ -0.19
ATXN3-205ENST00000454964 STAC3Q96MF2 364 aa13.87□□□□□ -0.19
ATXN3-205ENST00000454964 IDI1Q13907 227 aa13.85□□□□□ -0.19
ATXN3-205ENST00000454964 KIF1BO60333 1816 aa13.85□□□□□ -0.19
ATXN3-205ENST00000454964 ZNF142P52746 1687 aaPredicted RBP13.85□□□□□ -0.19
ATXN3-205ENST00000454964 UGGT1Q9NYU2 1555 aa13.84□□□□□ -0.19
ATXN3-205ENST00000454964 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.84□□□□□ -0.19
ATXN3-205ENST00000454964 EID1Q9Y6B2 187 aa13.84□□□□□ -0.19
ATXN3-205ENST00000454964 CEP170BQ9Y4F5 1589 aaPredicted RBP13.83□□□□□ -0.19
ATXN3-205ENST00000454964 MYO3AQ8NEV4 1616 aa13.83□□□□□ -0.2
ATXN3-205ENST00000454964 CCDC144AA2RUR9 1427 aa13.83□□□□□ -0.2
ATXN3-205ENST00000454964 ANKLE2Q86XL3 938 aa13.83□□□□□ -0.2
ATXN3-205ENST00000454964 TRPM2O94759 1503 aa13.83□□□□□ -0.2
ATXN3-205ENST00000454964 RPGRIP1LQ68CZ1 1315 aa13.83□□□□□ -0.2
ATXN3-205ENST00000454964 CLSPNQ9HAW4 1339 aa13.83□□□□□ -0.2
ATXN3-205ENST00000454964 PLA2R1Q13018 1463 aa13.81□□□□□ -0.2
ATXN3-205ENST00000454964 PIK3C2BO00750 1634 aa13.81□□□□□ -0.2
ATXN3-205ENST00000454964 SYNMO15061 1565 aa13.79□□□□□ -0.2
ATXN3-205ENST00000454964 NEURL4Q96JN8 1562 aa13.79□□□□□ -0.2
ATXN3-205ENST00000454964 CHGAP10645 457 aaKnown RBP13.79□□□□□ -0.2
ATXN3-205ENST00000454964 LMTK3Q96Q04 1460 aa13.79□□□□□ -0.2
ATXN3-205ENST00000454964 UBR1Q8IWV7 1749 aa13.78□□□□□ -0.2
ATXN3-205ENST00000454964 VGFO15240 615 aaPredicted RBP13.78□□□□□ -0.2
ATXN3-205ENST00000454964 ANKRD30BQ9BXX2 1392 aa13.78□□□□□ -0.2
ATXN3-205ENST00000454964 ZNF326Q5BKZ1 582 aaKnown RBP13.77□□□□□ -0.21
ATXN3-205ENST00000454964 ADGRB3O60242 1522 aa13.76□□□□□ -0.21
ATXN3-205ENST00000454964 SCAF1Q9H7N4 1312 aaKnown RBP13.76□□□□□ -0.21
ATXN3-205ENST00000454964 KCNA4P22459 653 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms