RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 PLEKHG3A1L390 1219 aa10.2□□□□□ -0.78
CDH19-202ENST00000454642 TTLL12Q14166 644 aaPredicted RBP10.2□□□□□ -0.78
CDH19-202ENST00000454642 AMHR2Q16671 573 aa10.19□□□□□ -0.78
CDH19-202ENST00000454642 HOXB3P14651 431 aaPredicted RBP10.18□□□□□ -0.78
CDH19-202ENST00000454642 DDRGK1Q96HY6 314 aa10.18□□□□□ -0.78
CDH19-202ENST00000454642 PTGDRQ13258 359 aa10.17□□□□□ -0.78
CDH19-202ENST00000454642 ZMYND15Q9H091 742 aa10.17□□□□□ -0.78
CDH19-202ENST00000454642 EMP3P54852 163 aa10.15□□□□□ -0.78
CDH19-202ENST00000454642 CDHR5Q9HBB8 845 aa10.13□□□□□ -0.79
CDH19-202ENST00000454642 GIGYF2Q6Y7W6 1299 aaKnown RBP10.12□□□□□ -0.79
CDH19-202ENST00000454642 POTEB3A0JP26 581 aa10.11□□□□□ -0.79
CDH19-202ENST00000454642 POTEBQ6S5H4 581 aa10.11□□□□□ -0.79
CDH19-202ENST00000454642 PTCD2Q8WV60 388 aaKnown RBP10.11□□□□□ -0.79
CDH19-202ENST00000454642 RBM33Q96EV2 1170 aaKnown RBP10.11□□□□□ -0.79
CDH19-202ENST00000454642 DOK7Q18PE1 504 aa10.1□□□□□ -0.79
CDH19-202ENST00000454642 HS3ST6Q96QI5 342 aa10.1□□□□□ -0.79
CDH19-202ENST00000454642 RSPH6AQ9H0K4 717 aa10.1□□□□□ -0.79
CDH19-202ENST00000454642 MAP3K7O43318 606 aa10.09□□□□□ -0.79
CDH19-202ENST00000454642 MS4A1P11836 297 aa10.09□□□□□ -0.79
CDH19-202ENST00000454642 HOXB1P14653 301 aaPredicted RBP10.09□□□□□ -0.79
CDH19-202ENST00000454642 REPIN1Q9BWE0 567 aaKnown RBP10.09□□□□□ -0.79
CDH19-202ENST00000454642 FAM205CA6NFA0 338 aa10.08□□□□□ -0.8
CDH19-202ENST00000454642 EN1Q05925 392 aaPredicted RBP10.07□□□□□ -0.8
CDH19-202ENST00000454642 SPNS2Q8IVW8 549 aa10.07□□□□□ -0.8
CDH19-202ENST00000454642 NPDC1Q9NQX5 325 aaPredicted RBP10.07□□□□□ -0.8
CDH19-202ENST00000454642 ZNF710Q8N1W2 664 aa10.06□□□□□ -0.8
CDH19-202ENST00000454642 ANO8Q9HCE9 1232 aaPredicted RBP10.06□□□□□ -0.8
CDH19-202ENST00000454642 TSR1Q2NL82 804 aaKnown RBP10.06□□□□□ -0.8
CDH19-202ENST00000454642 ARID3AQ99856 593 aa10.06□□□□□ -0.8
CDH19-202ENST00000454642 KRTAP3-3Q9BYR6 98 aa10.06□□□□□ -0.8
CDH19-202ENST00000454642 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
CDH19-202ENST00000454642 PHF14O94880 888 aa10.05□□□□□ -0.8
CDH19-202ENST00000454642 MDM2Q00987 491 aaPredicted RBP10.04□□□□□ -0.8
CDH19-202ENST00000454642 MMRN1Q13201 1228 aa10.04□□□□□ -0.8
CDH19-202ENST00000454642 PHOX2BQ99453 314 aa10.04□□□□□ -0.8
CDH19-202ENST00000454642 RIMBP2O15034 1052 aa10.03□□□□□ -0.8
CDH19-202ENST00000454642 SLC34A2O95436 690 aa10.03□□□□□ -0.8
CDH19-202ENST00000454642 UBTFP17480 764 aaKnown RBP10.03□□□□□ -0.8
CDH19-202ENST00000454642 FAM161AQ3B820 660 aa10.03□□□□□ -0.8
CDH19-202ENST00000454642 ZSWIM6Q9HCJ5 1215 aa10.03□□□□□ -0.8
CDH19-202ENST00000454642 PCDHGA10Q9Y5H3 936 aa10.03□□□□□ -0.8
CDH19-202ENST00000454642 EPAS1Q99814 870 aa10.02□□□□□ -0.8
CDH19-202ENST00000454642 ARID3CA6NKF2 412 aa10.01□□□□□ -0.81
CDH19-202ENST00000454642 NLRP7Q8WX94 980 aa10.01□□□□□ -0.81
CDH19-202ENST00000454642 PCMTD1Q96MG8 357 aaPredicted RBP10.01□□□□□ -0.81
CDH19-202ENST00000454642 GOPCQ9HD26 462 aa10.01□□□□□ -0.81
CDH19-202ENST00000454642 CLCN1P35523 988 aa10□□□□□ -0.81
CDH19-202ENST00000454642 FLIIQ13045 1269 aa9.99□□□□□ -0.81
CDH19-202ENST00000454642 GPCPD1Q9NPB8 672 aa9.99□□□□□ -0.81
CDH19-202ENST00000454642 ATP1B4Q9UN42 357 aaPredicted RBP9.99□□□□□ -0.81
CDH19-202ENST00000454642 PCDHGA4Q9Y5G9 962 aa9.99□□□□□ -0.81
CDH19-202ENST00000454642 GPR153Q6NV75 609 aa9.99□□□□□ -0.81
CDH19-202ENST00000454642 C1orf115Q9H7X2 142 aa9.99□□□□□ -0.81
CDH19-202ENST00000454642 SSTR3P32745 418 aaPredicted RBP9.98□□□□□ -0.81
CDH19-202ENST00000454642 TYW1BQ6NUM6 668 aa9.98□□□□□ -0.81
CDH19-202ENST00000454642 TMUB1Q9BVT8 246 aa9.97□□□□□ -0.81
CDH19-202ENST00000454642 ERBB3P21860 1342 aa9.97□□□□□ -0.81
CDH19-202ENST00000454642 APBB1O00213 710 aa9.96□□□□□ -0.82
CDH19-202ENST00000454642 ONECUT3O60422 494 aaPredicted RBP9.96□□□□□ -0.82
CDH19-202ENST00000454642 CLUAP1Q96AJ1 413 aa9.96□□□□□ -0.82
CDH19-202ENST00000454642 BEGAINQ9BUH8 593 aa9.96□□□□□ -0.82
CDH19-202ENST00000454642 SH3D19Q5HYK7 790 aa9.94□□□□□ -0.82
CDH19-202ENST00000454642 PADI6Q6TGC4 694 aa9.94□□□□□ -0.82
CDH19-202ENST00000454642 METTL3Q86U44 580 aaKnown RBP9.94□□□□□ -0.82
CDH19-202ENST00000454642 FBXW7Q969H0 707 aa9.93□□□□□ -0.82
CDH19-202ENST00000454642 JPH4Q96JJ6 628 aa9.93□□□□□ -0.82
CDH19-202ENST00000454642 POLR3EQ9NVU0 708 aa9.93□□□□□ -0.82
CDH19-202ENST00000454642 VARS2Q5ST30 1063 aaKnown RBP9.92□□□□□ -0.82
CDH19-202ENST00000454642 C6orf132Q5T0Z8 1188 aa9.91□□□□□ -0.82
CDH19-202ENST00000454642 ZNF454Q8N9F8 522 aa9.91□□□□□ -0.82
CDH19-202ENST00000454642 PROCA1Q8NCQ7 364 aaPredicted RBP9.91□□□□□ -0.82
CDH19-202ENST00000454642 FAM217BQ9NTX9 383 aaPredicted RBP9.91□□□□□ -0.82
CDH19-202ENST00000454642 OATP04181 439 aa9.9□□□□□ -0.82
CDH19-202ENST00000454642 FOSBP53539 338 aa9.9□□□□□ -0.82
CDH19-202ENST00000454642 SKIV2LQ15477 1246 aaKnown RBP9.9□□□□□ -0.82
CDH19-202ENST00000454642 KDM4FA0A1W2PPD8 638 aa9.9□□□□□ -0.83
CDH19-202ENST00000454642 KHSRPQ92945 711 aaKnown RBP eCLIP9.9□□□□□ -0.83
CDH19-202ENST00000454642 ADGRG1Q9Y653 693 aa9.9□□□□□ -0.83
CDH19-202ENST00000454642 MCM6Q14566 821 aa9.89□□□□□ -0.83
CDH19-202ENST00000454642 ARSIQ5FYB1 569 aa9.89□□□□□ -0.83
CDH19-202ENST00000454642 ZNF687Q8N1G0 1237 aa9.89□□□□□ -0.83
CDH19-202ENST00000454642 PXYLP1Q8TE99 480 aa9.89□□□□□ -0.83
CDH19-202ENST00000454642 NUDT7P0C024 238 aa9.88□□□□□ -0.83
CDH19-202ENST00000454642 ZDHHC16Q969W1 377 aa9.88□□□□□ -0.83
CDH19-202ENST00000454642 CERKQ8TCT0 537 aa9.87□□□□□ -0.83
CDH19-202ENST00000454642 ADAM33Q9BZ11 813 aa9.86□□□□□ -0.83
CDH19-202ENST00000454642 TRAK2O60296 914 aa9.85□□□□□ -0.83
CDH19-202ENST00000454642 MYSM1Q5VVJ2 828 aa9.85□□□□□ -0.83
CDH19-202ENST00000454642 A6NJR5 290 aa9.83□□□□□ -0.84
CDH19-202ENST00000454642 CDCA7LQ96GN5 454 aa9.83□□□□□ -0.84
CDH19-202ENST00000454642 POM121Q96HA1 1249 aa9.83□□□□□ -0.84
CDH19-202ENST00000454642 PRSS12P56730 875 aa9.82□□□□□ -0.84
CDH19-202ENST00000454642 PODXL2Q9NZ53 605 aa9.82□□□□□ -0.84
CDH19-202ENST00000454642 CLK2P49760 499 aaKnown RBP9.81□□□□□ -0.84
CDH19-202ENST00000454642 CCDC82Q8N4S0 544 aa9.81□□□□□ -0.84
CDH19-202ENST00000454642 TTC13Q8NBP0 860 aa9.81□□□□□ -0.84
CDH19-202ENST00000454642 RBM46Q8TBY0 533 aaKnown RBP9.81□□□□□ -0.84
CDH19-202ENST00000454642 TBC1D2Q9BYX2 928 aa9.81□□□□□ -0.84
CDH19-202ENST00000454642 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.8□□□□□ -0.84
CDH19-202ENST00000454642 RBM27Q9P2N5 1060 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms