RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 ABCC5O15440 1437 aa16.56■□□□□ 0.24
DDX39A-203ENST00000454233 DAPK1P53355 1430 aa16.55■□□□□ 0.24
DDX39A-203ENST00000454233 DUOX2Q9NRD8 1548 aa16.55■□□□□ 0.24
DDX39A-203ENST00000454233 CROCC2H7BZ55 1655 aa16.54■□□□□ 0.24
DDX39A-203ENST00000454233 EIF2AK4Q9P2K8 1649 aaKnown RBP16.54■□□□□ 0.24
DDX39A-203ENST00000454233 KIF15Q9NS87 1388 aa16.53■□□□□ 0.24
DDX39A-203ENST00000454233 DNMT1P26358 1616 aaKnown RBP16.53■□□□□ 0.24
DDX39A-203ENST00000454233 STRCQ7RTU9 1775 aa16.53■□□□□ 0.24
DDX39A-203ENST00000454233 MYO3AQ8NEV4 1616 aa16.52■□□□□ 0.24
DDX39A-203ENST00000454233 RNF17Q9BXT8 1623 aaKnown RBP16.52■□□□□ 0.24
DDX39A-203ENST00000454233 RRP7BPQ9NSQ0 103 aa16.52■□□□□ 0.24
DDX39A-203ENST00000454233 PZPP20742 1482 aa16.52■□□□□ 0.23
DDX39A-203ENST00000454233 FAM50AQ14320 339 aaKnown RBP16.51■□□□□ 0.23
DDX39A-203ENST00000454233 NCOA1Q15788 1441 aa16.51■□□□□ 0.23
DDX39A-203ENST00000454233 ZNF142P52746 1687 aaPredicted RBP16.5■□□□□ 0.23
DDX39A-203ENST00000454233 CAMSAP1Q5T5Y3 1602 aa16.5■□□□□ 0.23
DDX39A-203ENST00000454233 FBXO31Q5XUX0 539 aaPredicted RBP16.5■□□□□ 0.23
DDX39A-203ENST00000454233 FBXO41Q8TF61 875 aa16.5■□□□□ 0.23
DDX39A-203ENST00000454233 CHIC2Q9UKJ5 165 aa16.5■□□□□ 0.23
DDX39A-203ENST00000454233 PTPRTO14522 1441 aa16.5■□□□□ 0.23
DDX39A-203ENST00000454233 CEP170BQ9Y4F5 1589 aaPredicted RBP16.5■□□□□ 0.23
DDX39A-203ENST00000454233 TNRQ92752 1358 aa16.5■□□□□ 0.23
DDX39A-203ENST00000454233 ANKRD30AQ9BXX3 1397 aa16.5■□□□□ 0.23
DDX39A-203ENST00000454233 ERBINQ96RT1 1412 aa16.49■□□□□ 0.23
DDX39A-203ENST00000454233 ZC3H13Q5T200 1668 aaKnown RBP16.48■□□□□ 0.23
DDX39A-203ENST00000454233 A2ML1A8K2U0 1454 aa16.48■□□□□ 0.23
DDX39A-203ENST00000454233 ABCC3O15438 1527 aa16.47■□□□□ 0.23
DDX39A-203ENST00000454233 CERKQ8TCT0 537 aa16.46■□□□□ 0.23
DDX39A-203ENST00000454233 PLA2R1Q13018 1463 aa16.46■□□□□ 0.23
DDX39A-203ENST00000454233 MROH1Q8NDA8 1641 aa16.45■□□□□ 0.22
DDX39A-203ENST00000454233 PKD2Q13563 968 aa16.45■□□□□ 0.22
DDX39A-203ENST00000454233 NCKAP5LQ9HCH0 1330 aa16.45■□□□□ 0.22
DDX39A-203ENST00000454233 KANK1Q14678 1352 aa16.43■□□□□ 0.22
DDX39A-203ENST00000454233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.43■□□□□ 0.228e-8■■■□□ 17.9
DDX39A-203ENST00000454233 ADGRL2O95490 1459 aa16.42■□□□□ 0.22
DDX39A-203ENST00000454233 NLRP1Q9C000 1473 aa16.42■□□□□ 0.22
DDX39A-203ENST00000454233 PRDM15P57071 1507 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-203ENST00000454233 CEP152O94986 1710 aa16.42■□□□□ 0.22
DDX39A-203ENST00000454233 PPARGC1BQ86YN6 1023 aaKnown RBP16.4■□□□□ 0.22
DDX39A-203ENST00000454233 THEMISQ8N1K5 641 aaPredicted RBP16.4■□□□□ 0.22
DDX39A-203ENST00000454233 ERVK-7P63135 1459 aa16.4■□□□□ 0.22
DDX39A-203ENST00000454233 SPATA31D1Q6ZQQ2 1576 aa16.39■□□□□ 0.21
DDX39A-203ENST00000454233 DEPDC5O75140 1603 aa16.38■□□□□ 0.21
DDX39A-203ENST00000454233 ARHGAP31Q2M1Z3 1444 aa16.38■□□□□ 0.21
DDX39A-203ENST00000454233 UGGT1Q9NYU2 1555 aa16.38■□□□□ 0.21
DDX39A-203ENST00000454233 ANKRD50Q9ULJ7 1429 aa16.36■□□□□ 0.21
DDX39A-203ENST00000454233 ANKLE2Q86XL3 938 aa16.36■□□□□ 0.21
DDX39A-203ENST00000454233 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.36■□□□□ 0.214e-9■□□□□ 10.2
DDX39A-203ENST00000454233 CFAP65Q6ZU64 1925 aaKnown RBP16.35■□□□□ 0.21
DDX39A-203ENST00000454233 LMTK2Q8IWU2 1503 aa16.34■□□□□ 0.21
DDX39A-203ENST00000454233 ITGAEP38570 1179 aa16.33■□□□□ 0.2
DDX39A-203ENST00000454233 ROCK1Q13464 1354 aa16.33■□□□□ 0.2
DDX39A-203ENST00000454233 LTBP4Q8N2S1 1624 aa16.33■□□□□ 0.2
DDX39A-203ENST00000454233 POLR1AO95602 1720 aaPredicted RBP16.33■□□□□ 0.2
DDX39A-203ENST00000454233 VWDEQ8N2E2 1590 aa16.32■□□□□ 0.2
DDX39A-203ENST00000454233 ZNF335Q9H4Z2 1342 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-203ENST00000454233 NEURL4Q96JN8 1562 aa16.3■□□□□ 0.2
DDX39A-203ENST00000454233 IQSEC2Q5JU85 1478 aa16.29■□□□□ 0.2
DDX39A-203ENST00000454233 STAG3Q9UJ98 1225 aa16.28■□□□□ 0.2
DDX39A-203ENST00000454233 EFCAB6Q5THR3 1501 aa16.28■□□□□ 0.2
DDX39A-203ENST00000454233 NPHP4O75161 1426 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-203ENST00000454233 UBR1Q8IWV7 1749 aa16.27■□□□□ 0.19
DDX39A-203ENST00000454233 MED14O60244 1454 aa16.27■□□□□ 0.19
DDX39A-203ENST00000454233 RRBP1Q9P2E9 1410 aaKnown RBP16.25■□□□□ 0.19
DDX39A-203ENST00000454233 RPRD2Q5VT52 1461 aaKnown RBP16.24■□□□□ 0.19
DDX39A-203ENST00000454233 EID1Q9Y6B2 187 aa16.24■□□□□ 0.19
DDX39A-203ENST00000454233 NOS1P29475 1434 aa16.24■□□□□ 0.19
DDX39A-203ENST00000454233 UNC13BO14795 1591 aa16.24■□□□□ 0.19
DDX39A-203ENST00000454233 PIK3C2BO00750 1634 aa16.23■□□□□ 0.19
DDX39A-203ENST00000454233 IDI1Q13907 227 aa16.23■□□□□ 0.19
DDX39A-203ENST00000454233 TXNDC2Q86VQ3 553 aa16.23■□□□□ 0.19
DDX39A-203ENST00000454233 SLC52A1Q9NWF4 448 aa16.23■□□□□ 0.19
DDX39A-203ENST00000454233 TET3O43151 1660 aa16.23■□□□□ 0.19
DDX39A-203ENST00000454233 IQGAP1P46940 1657 aa16.23■□□□□ 0.19
DDX39A-203ENST00000454233 SCAF11Q99590 1463 aaKnown RBP16.22■□□□□ 0.19
DDX39A-203ENST00000454233 SLIT1O75093 1534 aa16.22■□□□□ 0.19
DDX39A-203ENST00000454233 ARHGAP23Q9P227 1491 aa16.22■□□□□ 0.19
DDX39A-203ENST00000454233 SYNMO15061 1565 aa16.21■□□□□ 0.19
DDX39A-203ENST00000454233 CPS1P31327 1500 aa16.2■□□□□ 0.18
DDX39A-203ENST00000454233 NUP155O75694 1391 aa16.2■□□□□ 0.18
DDX39A-203ENST00000454233 TMEM2Q9UHN6 1383 aa16.2■□□□□ 0.18
DDX39A-203ENST00000454233 KDM5AP29375 1690 aaKnown RBP16.2■□□□□ 0.18
DDX39A-203ENST00000454233 GCC2Q8IWJ2 1684 aa16.2■□□□□ 0.18
DDX39A-203ENST00000454233 LTKP29376 864 aa16.19■□□□□ 0.18
DDX39A-203ENST00000454233 UBAP1LF5GYI3 381 aa16.18■□□□□ 0.18
DDX39A-203ENST00000454233 IQGAP3Q86VI3 1631 aa16.18■□□□□ 0.18
DDX39A-203ENST00000454233 ADGRB3O60242 1522 aa16.17■□□□□ 0.18
DDX39A-203ENST00000454233 E9PCH4 1651 aa16.14■□□□□ 0.18
DDX39A-203ENST00000454233 CHGAP10645 457 aaKnown RBP16.13■□□□□ 0.17
DDX39A-203ENST00000454233 HDGFP51858 240 aaKnown RBP16.13■□□□□ 0.17
DDX39A-203ENST00000454233 NAIPQ13075 1403 aa16.12■□□□□ 0.17
DDX39A-203ENST00000454233 TOM1O60784 492 aa16.12■□□□□ 0.17
DDX39A-203ENST00000454233 BCANQ96GW7 911 aa16.11■□□□□ 0.17
DDX39A-203ENST00000454233 PPP1R15AO75807 674 aaPredicted RBP16.1■□□□□ 0.17
DDX39A-203ENST00000454233 SCAF1Q9H7N4 1312 aaKnown RBP16.09■□□□□ 0.17
DDX39A-203ENST00000454233 HFM1A2PYH4 1435 aa16.09■□□□□ 0.17
DDX39A-203ENST00000454233 TMEM131LA2VDJ0 1609 aa16.08■□□□□ 0.17
DDX39A-203ENST00000454233 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.08■□□□□ 0.16
DDX39A-203ENST00000454233 RIMS2Q9UQ26 1411 aa16.08■□□□□ 0.16
DDX39A-203ENST00000454233 LRRC7Q96NW7 1537 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms