RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 APLP2Q06481 763 aa22.12■■□□□ 1.13
RFTN1-207ENST00000453536 FBXO31Q5XUX0 539 aaPredicted RBP22.12■■□□□ 1.13
RFTN1-207ENST00000453536 NPATQ14207 1427 aa22.12■■□□□ 1.13
RFTN1-207ENST00000453536 CEP170BQ9Y4F5 1589 aaPredicted RBP22.12■■□□□ 1.13
RFTN1-207ENST00000453536 TSPY4P0CV99 314 aa22.1■■□□□ 1.13
RFTN1-207ENST00000453536 TSPY10P0CW01 314 aa22.1■■□□□ 1.13
RFTN1-207ENST00000453536 TCOF1Q13428 1488 aaKnown RBP22.09■■□□□ 1.13
RFTN1-207ENST00000453536 DAPK1P53355 1430 aa22.09■■□□□ 1.13
RFTN1-207ENST00000453536 PPARGC1BQ86YN6 1023 aaKnown RBP22.09■■□□□ 1.13
RFTN1-207ENST00000453536 NCOA1Q15788 1441 aa22.08■■□□□ 1.13
RFTN1-207ENST00000453536 ABCC3O15438 1527 aa22.07■■□□□ 1.12
RFTN1-207ENST00000453536 EIF2AK4Q9P2K8 1649 aaKnown RBP22.07■■□□□ 1.12
RFTN1-207ENST00000453536 RSPH4AQ5TD94 716 aa22.07■■□□□ 1.12
RFTN1-207ENST00000453536 CHIC2Q9UKJ5 165 aa22.05■■□□□ 1.12
RFTN1-207ENST00000453536 SHANK2Q9UPX8 1470 aa22.04■■□□□ 1.12
RFTN1-207ENST00000453536 NCKAP5LQ9HCH0 1330 aa22.04■■□□□ 1.12
RFTN1-207ENST00000453536 PZPP20742 1482 aa22.03■■□□□ 1.12
RFTN1-207ENST00000453536 DUOX2Q9NRD8 1548 aa22.03■■□□□ 1.12
RFTN1-207ENST00000453536 RRP7BPQ9NSQ0 103 aa22.03■■□□□ 1.12
RFTN1-207ENST00000453536 KIF15Q9NS87 1388 aa22.02■■□□□ 1.12
RFTN1-207ENST00000453536 WASHC2CQ9Y4E1 1318 aa22.02■■□□□ 1.12
RFTN1-207ENST00000453536 ZC3H13Q5T200 1668 aaKnown RBP22.01■■□□□ 1.11
RFTN1-207ENST00000453536 TNRQ92752 1358 aa21.99■■□□□ 1.11
RFTN1-207ENST00000453536 A2ML1A8K2U0 1454 aa21.98■■□□□ 1.11
RFTN1-207ENST00000453536 FBXO41Q8TF61 875 aa21.98■■□□□ 1.11
RFTN1-207ENST00000453536 DEPDC5O75140 1603 aa21.98■■□□□ 1.11
RFTN1-207ENST00000453536 PRDM15P57071 1507 aaPredicted RBP21.97■■□□□ 1.11
RFTN1-207ENST00000453536 PPP6R1Q9UPN7 881 aa21.97■■□□□ 1.11
RFTN1-207ENST00000453536 LTBP4Q8N2S1 1624 aa21.97■■□□□ 1.11
RFTN1-207ENST00000453536 POLR1AO95602 1720 aaPredicted RBP21.97■■□□□ 1.11
RFTN1-207ENST00000453536 FAM135AQ9P2D6 1515 aa21.96■■□□□ 1.11
RFTN1-207ENST00000453536 FAM50AQ14320 339 aaKnown RBP21.96■■□□□ 1.11
RFTN1-207ENST00000453536 CERKQ8TCT0 537 aa21.96■■□□□ 1.11
RFTN1-207ENST00000453536 PTPRTO14522 1441 aa21.96■■□□□ 1.11
RFTN1-207ENST00000453536 NEURL4Q96JN8 1562 aa21.95■■□□□ 1.11
RFTN1-207ENST00000453536 SPATA31D1Q6ZQQ2 1576 aa21.94■■□□□ 1.1
RFTN1-207ENST00000453536 ERVK-7P63135 1459 aa21.93■■□□□ 1.1
RFTN1-207ENST00000453536 ERBINQ96RT1 1412 aa21.92■■□□□ 1.1
RFTN1-207ENST00000453536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.92■■□□□ 1.1
RFTN1-207ENST00000453536 PLA2R1Q13018 1463 aa21.91■■□□□ 1.1
RFTN1-207ENST00000453536 ZNF335Q9H4Z2 1342 aaPredicted RBP21.89■■□□□ 1.1
RFTN1-207ENST00000453536 ADGRL2O95490 1459 aa21.89■■□□□ 1.09
RFTN1-207ENST00000453536 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.88■■□□□ 1.09
RFTN1-207ENST00000453536 UGGT1Q9NYU2 1555 aa21.87■■□□□ 1.09
RFTN1-207ENST00000453536 UBR1Q8IWV7 1749 aa21.87■■□□□ 1.09
RFTN1-207ENST00000453536 VWDEQ8N2E2 1590 aa21.87■■□□□ 1.09
RFTN1-207ENST00000453536 ANKRD30AQ9BXX3 1397 aa21.87■■□□□ 1.09
RFTN1-207ENST00000453536 DMRT2Q9Y5R5 561 aa21.86■■□□□ 1.09
RFTN1-207ENST00000453536 NLRP1Q9C000 1473 aa21.83■■□□□ 1.09
RFTN1-207ENST00000453536 PIK3C2BO00750 1634 aa21.83■■□□□ 1.08
RFTN1-207ENST00000453536 SYNMO15061 1565 aa21.82■■□□□ 1.08
RFTN1-207ENST00000453536 ITGAEP38570 1179 aa21.81■■□□□ 1.08
RFTN1-207ENST00000453536 STRCP1A6NGW2 1772 aa21.8■■□□□ 1.08
RFTN1-207ENST00000453536 PKD2Q13563 968 aa21.78■■□□□ 1.08
RFTN1-207ENST00000453536 EFCAB6Q5THR3 1501 aa21.78■■□□□ 1.08
RFTN1-207ENST00000453536 IQGAP1P46940 1657 aa21.78■■□□□ 1.08
RFTN1-207ENST00000453536 LMTK2Q8IWU2 1503 aa21.77■■□□□ 1.08
RFTN1-207ENST00000453536 MYO5BQ9ULV0 1848 aa21.77■■□□□ 1.08
RFTN1-207ENST00000453536 ANKRD50Q9ULJ7 1429 aa21.77■■□□□ 1.08
RFTN1-207ENST00000453536 ARHGAP31Q2M1Z3 1444 aa21.76■■□□□ 1.07
RFTN1-207ENST00000453536 UNC13BO14795 1591 aa21.75■■□□□ 1.07
RFTN1-207ENST00000453536 NPHP4O75161 1426 aaPredicted RBP21.72■■□□□ 1.07
RFTN1-207ENST00000453536 TET3O43151 1660 aa21.72■■□□□ 1.07
RFTN1-207ENST00000453536 KANK1Q14678 1352 aa21.72■■□□□ 1.07
RFTN1-207ENST00000453536 E9PCH4 1651 aa21.71■■□□□ 1.07
RFTN1-207ENST00000453536 GCC2Q8IWJ2 1684 aa21.7■■□□□ 1.06
RFTN1-207ENST00000453536 THEMISQ8N1K5 641 aaPredicted RBP21.7■■□□□ 1.06
RFTN1-207ENST00000453536 MED14O60244 1454 aa21.7■■□□□ 1.06
RFTN1-207ENST00000453536 LTKP29376 864 aa21.69■■□□□ 1.06
RFTN1-207ENST00000453536 ANKLE2Q86XL3 938 aa21.68■■□□□ 1.06
RFTN1-207ENST00000453536 SENP3Q9H4L4 574 aaPredicted RBP21.68■■□□□ 1.06
RFTN1-207ENST00000453536 ARHGAP23Q9P227 1491 aa21.67■■□□□ 1.06
RFTN1-207ENST00000453536 NOS1P29475 1434 aa21.67■■□□□ 1.06
RFTN1-207ENST00000453536 IQGAP3Q86VI3 1631 aa21.66■■□□□ 1.06
RFTN1-207ENST00000453536 SLIT1O75093 1534 aa21.65■■□□□ 1.06
RFTN1-207ENST00000453536 IDI1Q13907 227 aa21.65■■□□□ 1.06
RFTN1-207ENST00000453536 SCAF11Q99590 1463 aaKnown RBP21.64■■□□□ 1.06
RFTN1-207ENST00000453536 ROCK1Q13464 1354 aa21.63■■□□□ 1.05
RFTN1-207ENST00000453536 ADGRB3O60242 1522 aa21.63■■□□□ 1.05
RFTN1-207ENST00000453536 IQSEC2Q5JU85 1478 aa21.63■■□□□ 1.05
RFTN1-207ENST00000453536 RRBP1Q9P2E9 1410 aaKnown RBP21.63■■□□□ 1.05
RFTN1-207ENST00000453536 ALKQ9UM73 1620 aa21.62■■□□□ 1.05
RFTN1-207ENST00000453536 XIRP1Q702N8 1843 aaKnown RBP21.62■■□□□ 1.05
RFTN1-207ENST00000453536 KDM5AP29375 1690 aaKnown RBP21.6■■□□□ 1.05
RFTN1-207ENST00000453536 UBAP1LF5GYI3 381 aa21.58■■□□□ 1.05
RFTN1-207ENST00000453536 TXNDC2Q86VQ3 553 aa21.58■■□□□ 1.05
RFTN1-207ENST00000453536 CPS1P31327 1500 aa21.58■■□□□ 1.04
RFTN1-207ENST00000453536 TMEM2Q9UHN6 1383 aa21.58■■□□□ 1.04
RFTN1-207ENST00000453536 TMEM131LA2VDJ0 1609 aa21.58■■□□□ 1.04
RFTN1-207ENST00000453536 STAG3Q9UJ98 1225 aa21.55■■□□□ 1.04
RFTN1-207ENST00000453536 RPRD2Q5VT52 1461 aaKnown RBP21.55■■□□□ 1.04
RFTN1-207ENST00000453536 LRRC7Q96NW7 1537 aa21.55■■□□□ 1.04
RFTN1-207ENST00000453536 NUP155O75694 1391 aa21.54■■□□□ 1.04
RFTN1-207ENST00000453536 SPHKAPQ2M3C7 1700 aa21.52■■□□□ 1.04
RFTN1-207ENST00000453536 NUTM2DQ5VT03 806 aaPredicted RBP21.51■■□□□ 1.03
RFTN1-207ENST00000453536 NAIPQ13075 1403 aa21.51■■□□□ 1.03
RFTN1-207ENST00000453536 ZFYVE9O95405 1425 aa21.5■■□□□ 1.03
RFTN1-207ENST00000453536 PIP4K2BP78356 416 aa21.5■■□□□ 1.03
RFTN1-207ENST00000453536 SLC26A8Q96RN1 970 aa21.5■■□□□ 1.03
RFTN1-207ENST00000453536 RBM33Q96EV2 1170 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms