RNA–Protein interactions for RNA: ENST00000453152.1

TRIM50-202, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM50, Length 1,599 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-202ENST00000453152 KDM5DQ9BY66 1539 aa24.06■■□□□ 1.44
TRIM50-202ENST00000453152 CROCC2H7BZ55 1655 aa24.06■■□□□ 1.44
TRIM50-202ENST00000453152 WASHC2CQ9Y4E1 1318 aa24.05■■□□□ 1.44
TRIM50-202ENST00000453152 DUOX2Q9NRD8 1548 aa24.05■■□□□ 1.44
TRIM50-202ENST00000453152 RRP7BPQ9NSQ0 103 aa24.04■■□□□ 1.44
TRIM50-202ENST00000453152 RNF17Q9BXT8 1623 aaKnown RBP24.03■■□□□ 1.44
TRIM50-202ENST00000453152 EIF2AK4Q9P2K8 1649 aaKnown RBP24.03■■□□□ 1.44
TRIM50-202ENST00000453152 FAM50AQ14320 339 aaKnown RBP24.01■■□□□ 1.43
TRIM50-202ENST00000453152 CHIC2Q9UKJ5 165 aa24.01■■□□□ 1.43
TRIM50-202ENST00000453152 PZPP20742 1482 aa24.01■■□□□ 1.43
TRIM50-202ENST00000453152 FBXO31Q5XUX0 539 aaPredicted RBP24■■□□□ 1.43
TRIM50-202ENST00000453152 MROH1Q8NDA8 1641 aa24■■□□□ 1.43
TRIM50-202ENST00000453152 ERBINQ96RT1 1412 aa24■■□□□ 1.43
TRIM50-202ENST00000453152 ANKRD30AQ9BXX3 1397 aa23.99■■□□□ 1.43
TRIM50-202ENST00000453152 NCOA1Q15788 1441 aa23.99■■□□□ 1.43
TRIM50-202ENST00000453152 STRCQ7RTU9 1775 aa23.99■■□□□ 1.43
TRIM50-202ENST00000453152 ABCC3O15438 1527 aa23.97■■□□□ 1.43
TRIM50-202ENST00000453152 PPARGC1BQ86YN6 1023 aaKnown RBP23.96■■□□□ 1.43
TRIM50-202ENST00000453152 ADGRL2O95490 1459 aa23.96■■□□□ 1.43
TRIM50-202ENST00000453152 MYO3AQ8NEV4 1616 aa23.96■■□□□ 1.43
TRIM50-202ENST00000453152 ILDR1Q86SU0 546 aaPredicted RBP23.95■■□□□ 1.42
TRIM50-202ENST00000453152 TNRQ92752 1358 aa23.95■■□□□ 1.42
TRIM50-202ENST00000453152 DMRT2Q9Y5R5 561 aa23.95■■□□□ 1.42
TRIM50-202ENST00000453152 CEP170BQ9Y4F5 1589 aaPredicted RBP23.93■■□□□ 1.42
TRIM50-202ENST00000453152 ZNF142P52746 1687 aaPredicted RBP23.93■■□□□ 1.42
TRIM50-202ENST00000453152 CAMSAP1Q5T5Y3 1602 aa23.91■■□□□ 1.42
TRIM50-202ENST00000453152 PRDM15P57071 1507 aaPredicted RBP23.91■■□□□ 1.42
TRIM50-202ENST00000453152 ZC3H13Q5T200 1668 aaKnown RBP23.91■■□□□ 1.42
TRIM50-202ENST00000453152 A2ML1A8K2U0 1454 aa23.9■■□□□ 1.42
TRIM50-202ENST00000453152 PTPRTO14522 1441 aa23.9■■□□□ 1.42
TRIM50-202ENST00000453152 PLA2R1Q13018 1463 aa23.88■■□□□ 1.41
TRIM50-202ENST00000453152 DEPDC5O75140 1603 aa23.87■■□□□ 1.41
TRIM50-202ENST00000453152 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.86■■□□□ 1.41
TRIM50-202ENST00000453152 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.86■■□□□ 1.41
TRIM50-202ENST00000453152 SPATA31D1Q6ZQQ2 1576 aa23.85■■□□□ 1.41
TRIM50-202ENST00000453152 NCKAP5LQ9HCH0 1330 aa23.84■■□□□ 1.41
TRIM50-202ENST00000453152 ARHGAP31Q2M1Z3 1444 aa23.84■■□□□ 1.41
TRIM50-202ENST00000453152 CEP152O94986 1710 aa23.84■■□□□ 1.41
TRIM50-202ENST00000453152 ERVK-7P63135 1459 aa23.84■■□□□ 1.41
TRIM50-202ENST00000453152 NLRP1Q9C000 1473 aa23.83■■□□□ 1.41
TRIM50-202ENST00000453152 PKD2Q13563 968 aa23.83■■□□□ 1.41
TRIM50-202ENST00000453152 ANKRD50Q9ULJ7 1429 aa23.83■■□□□ 1.41
TRIM50-202ENST00000453152 KANK1Q14678 1352 aa23.82■■□□□ 1.4
TRIM50-202ENST00000453152 VWDEQ8N2E2 1590 aa23.81■■□□□ 1.4
TRIM50-202ENST00000453152 ROCK1Q13464 1354 aa23.81■■□□□ 1.4
TRIM50-202ENST00000453152 FBXO41Q8TF61 875 aa23.8■■□□□ 1.4
TRIM50-202ENST00000453152 CERKQ8TCT0 537 aa23.79■■□□□ 1.4
TRIM50-202ENST00000453152 LMTK2Q8IWU2 1503 aa23.79■■□□□ 1.4
TRIM50-202ENST00000453152 RRBP1Q9P2E9 1410 aaKnown RBP23.76■■□□□ 1.39
TRIM50-202ENST00000453152 UGGT1Q9NYU2 1555 aa23.76■■□□□ 1.39
TRIM50-202ENST00000453152 THEMISQ8N1K5 641 aaPredicted RBP23.76■■□□□ 1.39
TRIM50-202ENST00000453152 ITGAEP38570 1179 aa23.74■■□□□ 1.39
TRIM50-202ENST00000453152 CFAP65Q6ZU64 1925 aaKnown RBP23.73■■□□□ 1.39
TRIM50-202ENST00000453152 LTBP4Q8N2S1 1624 aa23.7■■□□□ 1.39
TRIM50-202ENST00000453152 ANKLE2Q86XL3 938 aa23.69■■□□□ 1.38
TRIM50-202ENST00000453152 EFCAB6Q5THR3 1501 aa23.69■■□□□ 1.38
TRIM50-202ENST00000453152 NEURL4Q96JN8 1562 aa23.68■■□□□ 1.38
TRIM50-202ENST00000453152 NOS1P29475 1434 aa23.67■■□□□ 1.38
TRIM50-202ENST00000453152 ZNF335Q9H4Z2 1342 aaPredicted RBP23.67■■□□□ 1.38
TRIM50-202ENST00000453152 UNC13BO14795 1591 aa23.66■■□□□ 1.38
TRIM50-202ENST00000453152 IDI1Q13907 227 aa23.64■■□□□ 1.37
TRIM50-202ENST00000453152 MED14O60244 1454 aa23.64■■□□□ 1.37
TRIM50-202ENST00000453152 RPRD2Q5VT52 1461 aaKnown RBP23.63■■□□□ 1.37
TRIM50-202ENST00000453152 POLR1AO95602 1720 aaPredicted RBP23.63■■□□□ 1.37
TRIM50-202ENST00000453152 UBR1Q8IWV7 1749 aa23.62■■□□□ 1.37
TRIM50-202ENST00000453152 SYNMO15061 1565 aa23.62■■□□□ 1.37
TRIM50-202ENST00000453152 NPHP4O75161 1426 aaPredicted RBP23.61■■□□□ 1.37
TRIM50-202ENST00000453152 TET3O43151 1660 aa23.6■■□□□ 1.37
TRIM50-202ENST00000453152 ARHGAP23Q9P227 1491 aa23.6■■□□□ 1.37
TRIM50-202ENST00000453152 SLIT1O75093 1534 aa23.59■■□□□ 1.37
TRIM50-202ENST00000453152 PIK3C2BO00750 1634 aa23.58■■□□□ 1.37
TRIM50-202ENST00000453152 LTKP29376 864 aa23.58■■□□□ 1.37
TRIM50-202ENST00000453152 NUP155O75694 1391 aa23.58■■□□□ 1.36
TRIM50-202ENST00000453152 SLC52A1Q9NWF4 448 aa23.57■■□□□ 1.36
TRIM50-202ENST00000453152 IQGAP3Q86VI3 1631 aa23.56■■□□□ 1.36
TRIM50-202ENST00000453152 TMEM2Q9UHN6 1383 aa23.56■■□□□ 1.36
TRIM50-202ENST00000453152 NAIPQ13075 1403 aa23.55■■□□□ 1.36
TRIM50-202ENST00000453152 IQSEC2Q5JU85 1478 aa23.55■■□□□ 1.36
TRIM50-202ENST00000453152 SCAF11Q99590 1463 aaKnown RBP23.55■■□□□ 1.36
TRIM50-202ENST00000453152 TXNDC2Q86VQ3 553 aa23.54■■□□□ 1.36
TRIM50-202ENST00000453152 STAG3Q9UJ98 1225 aa23.54■■□□□ 1.36
TRIM50-202ENST00000453152 GCC2Q8IWJ2 1684 aa23.53■■□□□ 1.36
TRIM50-202ENST00000453152 KDM5AP29375 1690 aaKnown RBP23.52■■□□□ 1.36
TRIM50-202ENST00000453152 IQGAP1P46940 1657 aa23.51■■□□□ 1.35
TRIM50-202ENST00000453152 E9PCH4 1651 aa23.5■■□□□ 1.35
TRIM50-202ENST00000453152 EID1Q9Y6B2 187 aa23.5■■□□□ 1.35
TRIM50-202ENST00000453152 ADGRB3O60242 1522 aa23.49■■□□□ 1.35
TRIM50-202ENST00000453152 HFM1A2PYH4 1435 aa23.49■■□□□ 1.35
TRIM50-202ENST00000453152 CPS1P31327 1500 aa23.46■■□□□ 1.35
TRIM50-202ENST00000453152 ZFYVE9O95405 1425 aa23.41■■□□□ 1.34
TRIM50-202ENST00000453152 TMEM131LA2VDJ0 1609 aa23.41■■□□□ 1.34
TRIM50-202ENST00000453152 STRCP1A6NGW2 1772 aa23.38■■□□□ 1.33
TRIM50-202ENST00000453152 UBAP1LF5GYI3 381 aa23.37■■□□□ 1.33
TRIM50-202ENST00000453152 RIMS2Q9UQ26 1411 aa23.37■■□□□ 1.33
TRIM50-202ENST00000453152 CHGAP10645 457 aaKnown RBP23.36■■□□□ 1.33
TRIM50-202ENST00000453152 MYO5BQ9ULV0 1848 aa23.35■■□□□ 1.33
TRIM50-202ENST00000453152 LRRC7Q96NW7 1537 aa23.34■■□□□ 1.33
TRIM50-202ENST00000453152 TRIM52Q96A61 297 aa23.34■■□□□ 1.33
TRIM50-202ENST00000453152 SLC26A8Q96RN1 970 aa23.34■■□□□ 1.33
TRIM50-202ENST00000453152 HDGFP51858 240 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms