RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 NCOA2Q15596 1464 aa18.73■□□□□ 0.59
HERC3-207ENST00000452979 CCDC141Q6ZP82 1450 aa18.73■□□□□ 0.59
HERC3-207ENST00000452979 KIF3BO15066 747 aa18.73■□□□□ 0.59
HERC3-207ENST00000452979 UBAP1LF5GYI3 381 aa18.72■□□□□ 0.59
HERC3-207ENST00000452979 POLR1AO95602 1720 aaPredicted RBP18.71■□□□□ 0.59
HERC3-207ENST00000452979 PZPP20742 1482 aa18.71■□□□□ 0.59
HERC3-207ENST00000452979 CAMSAP2Q08AD1 1489 aa18.71■□□□□ 0.59
HERC3-207ENST00000452979 KDM5DQ9BY66 1539 aa18.71■□□□□ 0.59
HERC3-207ENST00000452979 FBXO31Q5XUX0 539 aaPredicted RBP18.71■□□□□ 0.59
HERC3-207ENST00000452979 TNRQ92752 1358 aa18.7■□□□□ 0.58
HERC3-207ENST00000452979 ARHGEF5Q12774 1597 aa18.69■□□□□ 0.58
HERC3-207ENST00000452979 NEURL4Q96JN8 1562 aa18.68■□□□□ 0.58
HERC3-207ENST00000452979 WASHC2CQ9Y4E1 1318 aa18.68■□□□□ 0.58
HERC3-207ENST00000452979 MIA2Q96PC5 1412 aa18.66■□□□□ 0.58
HERC3-207ENST00000452979 CPS1P31327 1500 aa18.65■□□□□ 0.58
HERC3-207ENST00000452979 TSPY4P0CV99 314 aa18.65■□□□□ 0.58
HERC3-207ENST00000452979 TSPY10P0CW01 314 aa18.65■□□□□ 0.58
HERC3-207ENST00000452979 THEMISQ8N1K5 641 aaPredicted RBP18.64■□□□□ 0.57
HERC3-207ENST00000452979 NLRP1Q9C000 1473 aa18.64■□□□□ 0.57
HERC3-207ENST00000452979 SHANK2Q9UPX8 1470 aa18.64■□□□□ 0.57
HERC3-207ENST00000452979 ANKLE2Q86XL3 938 aa18.63■□□□□ 0.57
HERC3-207ENST00000452979 DEPDC5O75140 1603 aa18.61■□□□□ 0.57
HERC3-207ENST00000452979 RNF17Q9BXT8 1623 aaKnown RBP18.61■□□□□ 0.57
HERC3-207ENST00000452979 MAST1Q9Y2H9 1570 aa18.61■□□□□ 0.57
HERC3-207ENST00000452979 MED14O60244 1454 aa18.61■□□□□ 0.57
HERC3-207ENST00000452979 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.61■□□□□ 0.57
HERC3-207ENST00000452979 UGGT1Q9NYU2 1555 aa18.6■□□□□ 0.57
HERC3-207ENST00000452979 LRRC9Q6ZRR7 1453 aa18.6■□□□□ 0.57
HERC3-207ENST00000452979 VWDEQ8N2E2 1590 aa18.59■□□□□ 0.57
HERC3-207ENST00000452979 TOM1O60784 492 aa18.59■□□□□ 0.57
HERC3-207ENST00000452979 ZC3H13Q5T200 1668 aaKnown RBP18.59■□□□□ 0.57
HERC3-207ENST00000452979 EIF2AK4Q9P2K8 1649 aaKnown RBP18.57■□□□□ 0.56
HERC3-207ENST00000452979 ABCC3O15438 1527 aa18.57■□□□□ 0.56
HERC3-207ENST00000452979 NPHP4O75161 1426 aaPredicted RBP18.57■□□□□ 0.56
HERC3-207ENST00000452979 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
HERC3-207ENST00000452979 MAP3K1Q13233 1512 aa18.55■□□□□ 0.56
HERC3-207ENST00000452979 HSPA1LP34931 641 aa18.55■□□□□ 0.56
HERC3-207ENST00000452979 IQGAP1P46940 1657 aa18.54■□□□□ 0.56
HERC3-207ENST00000452979 MROH1Q8NDA8 1641 aa18.53■□□□□ 0.56
HERC3-207ENST00000452979 PIP4K2BP78356 416 aa18.53■□□□□ 0.56
HERC3-207ENST00000452979 ALKQ9UM73 1620 aa18.52■□□□□ 0.55
HERC3-207ENST00000452979 ERVK-7P63135 1459 aa18.52■□□□□ 0.55
HERC3-207ENST00000452979 KANK4Q5T7N3 995 aaPredicted RBP18.51■□□□□ 0.55
HERC3-207ENST00000452979 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
HERC3-207ENST00000452979 STRCP1A6NGW2 1772 aa18.5■□□□□ 0.55
HERC3-207ENST00000452979 MYOM3Q5VTT5 1437 aa18.49■□□□□ 0.55
HERC3-207ENST00000452979 UBR1Q8IWV7 1749 aa18.49■□□□□ 0.55
HERC3-207ENST00000452979 CEP152O94986 1710 aa18.49■□□□□ 0.55
HERC3-207ENST00000452979 DUOX2Q9NRD8 1548 aa18.49■□□□□ 0.55
HERC3-207ENST00000452979 MED1Q15648 1581 aaPredicted RBP18.48■□□□□ 0.55
HERC3-207ENST00000452979 CFAP65Q6ZU64 1925 aaKnown RBP18.48■□□□□ 0.55
HERC3-207ENST00000452979 LOC105371045A0A1W2PR82 267 aa18.47■□□□□ 0.55
HERC3-207ENST00000452979 LRRC7Q96NW7 1537 aa18.47■□□□□ 0.55
HERC3-207ENST00000452979 ARHGAP31Q2M1Z3 1444 aa18.45■□□□□ 0.54
HERC3-207ENST00000452979 SYNMO15061 1565 aa18.45■□□□□ 0.54
HERC3-207ENST00000452979 ARHGAP23Q9P227 1491 aa18.43■□□□□ 0.54
HERC3-207ENST00000452979 SLIT1O75093 1534 aa18.43■□□□□ 0.54
HERC3-207ENST00000452979 PRDM15P57071 1507 aaPredicted RBP18.43■□□□□ 0.54
HERC3-207ENST00000452979 CROCC2H7BZ55 1655 aa18.42■□□□□ 0.54
HERC3-207ENST00000452979 SCAF11Q99590 1463 aaKnown RBP18.42■□□□□ 0.54
HERC3-207ENST00000452979 ABCC5O15440 1437 aa18.41■□□□□ 0.54
HERC3-207ENST00000452979 ERBINQ96RT1 1412 aa18.41■□□□□ 0.54
HERC3-207ENST00000452979 LTKP29376 864 aa18.4■□□□□ 0.54
HERC3-207ENST00000452979 KIF15Q9NS87 1388 aa18.4■□□□□ 0.54
HERC3-207ENST00000452979 TXNDC2Q86VQ3 553 aa18.39■□□□□ 0.53
HERC3-207ENST00000452979 PTPN23Q9H3S7 1636 aa18.38■□□□□ 0.53
HERC3-207ENST00000452979 RRP7BPQ9NSQ0 103 aa18.37■□□□□ 0.53
HERC3-207ENST00000452979 KDM5AP29375 1690 aaKnown RBP18.37■□□□□ 0.53
HERC3-207ENST00000452979 XIRP1Q702N8 1843 aaKnown RBP18.37■□□□□ 0.53
HERC3-207ENST00000452979 PIK3C2BO00750 1634 aa18.36■□□□□ 0.53
HERC3-207ENST00000452979 DAPK1P53355 1430 aa18.35■□□□□ 0.53
HERC3-207ENST00000452979 EID1Q9Y6B2 187 aa18.35■□□□□ 0.53
HERC3-207ENST00000452979 LMTK2Q8IWU2 1503 aa18.33■□□□□ 0.53
HERC3-207ENST00000452979 TMEM2Q9UHN6 1383 aa18.33■□□□□ 0.53
HERC3-207ENST00000452979 KANK1Q14678 1352 aa18.32■□□□□ 0.52
HERC3-207ENST00000452979 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.32■□□□□ 0.52
HERC3-207ENST00000452979 PHF23Q9BUL5 403 aaPredicted RBP18.32■□□□□ 0.52
HERC3-207ENST00000452979 FGD6Q6ZV73 1430 aa18.31■□□□□ 0.52
HERC3-207ENST00000452979 IDI1Q13907 227 aa18.3■□□□□ 0.52
HERC3-207ENST00000452979 EFCAB6Q5THR3 1501 aa18.29■□□□□ 0.52
HERC3-207ENST00000452979 APLP2Q06481 763 aa18.29■□□□□ 0.52
HERC3-207ENST00000452979 ANKRD30AQ9BXX3 1397 aa18.29■□□□□ 0.52
HERC3-207ENST00000452979 TET3O43151 1660 aa18.28■□□□□ 0.52
HERC3-207ENST00000452979 FAM135BQ49AJ0 1406 aa18.27■□□□□ 0.52
HERC3-207ENST00000452979 STAG3Q9UJ98 1225 aa18.27■□□□□ 0.52
HERC3-207ENST00000452979 NOS1P29475 1434 aa18.26■□□□□ 0.51
HERC3-207ENST00000452979 KCNA6P17658 529 aa18.26■□□□□ 0.51
HERC3-207ENST00000452979 SENP3Q9H4L4 574 aaPredicted RBP18.26■□□□□ 0.51
HERC3-207ENST00000452979 CHIC2Q9UKJ5 165 aa18.25■□□□□ 0.51
HERC3-207ENST00000452979 ADGRL2O95490 1459 aa18.23■□□□□ 0.51
HERC3-207ENST00000452979 TMEM94Q12767 1356 aa18.23■□□□□ 0.51
HERC3-207ENST00000452979 SLC52A1Q9NWF4 448 aa18.23■□□□□ 0.51
HERC3-207ENST00000452979 RGS17Q9UGC6 210 aaPredicted RBP18.23■□□□□ 0.51
HERC3-207ENST00000452979 ADGRB3O60242 1522 aa18.22■□□□□ 0.51
HERC3-207ENST00000452979 SLC26A8Q96RN1 970 aa18.21■□□□□ 0.51
HERC3-207ENST00000452979 NWD1Q149M9 1564 aa18.2■□□□□ 0.5
HERC3-207ENST00000452979 RPRD2Q5VT52 1461 aaKnown RBP18.2■□□□□ 0.5
HERC3-207ENST00000452979 PROSER2Q86WR7 435 aaPredicted RBP18.19■□□□□ 0.5
HERC3-207ENST00000452979 NKTRP30414 1462 aaKnown RBP18.18■□□□□ 0.5
HERC3-207ENST00000452979 ROBO1Q9Y6N7 1651 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms