RNA–Protein interactions for RNA: ENST00000452668.1

CHKB-CPT1B-201, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 4

Gene CHKB-CPT1B, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-201ENST00000452668 ZNF142P52746 1687 aaPredicted RBP18.69■□□□□ 0.58
CHKB-CPT1B-201ENST00000452668 FAM135AQ9P2D6 1515 aa18.69■□□□□ 0.58
CHKB-CPT1B-201ENST00000452668 TNRQ92752 1358 aa18.69■□□□□ 0.58
CHKB-CPT1B-201ENST00000452668 A2ML1A8K2U0 1454 aa18.69■□□□□ 0.58
CHKB-CPT1B-201ENST00000452668 KDM5DQ9BY66 1539 aa18.69■□□□□ 0.58
CHKB-CPT1B-201ENST00000452668 ARHGEF5Q12774 1597 aa18.68■□□□□ 0.58
CHKB-CPT1B-201ENST00000452668 LTBP4Q8N2S1 1624 aa18.67■□□□□ 0.58
CHKB-CPT1B-201ENST00000452668 ZNF335Q9H4Z2 1342 aaPredicted RBP18.67■□□□□ 0.58
CHKB-CPT1B-201ENST00000452668 DISP3Q9P2K9 1392 aa18.67■□□□□ 0.58
CHKB-CPT1B-201ENST00000452668 UBAP1LF5GYI3 381 aa18.66■□□□□ 0.58
CHKB-CPT1B-201ENST00000452668 FBXO31Q5XUX0 539 aaPredicted RBP18.66■□□□□ 0.58
CHKB-CPT1B-201ENST00000452668 THEMISQ8N1K5 641 aaPredicted RBP18.66■□□□□ 0.58
CHKB-CPT1B-201ENST00000452668 PZPP20742 1482 aa18.65■□□□□ 0.58
CHKB-CPT1B-201ENST00000452668 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
CHKB-CPT1B-201ENST00000452668 ANKLE2Q86XL3 938 aa18.64■□□□□ 0.57
CHKB-CPT1B-201ENST00000452668 MIA2Q96PC5 1412 aa18.63■□□□□ 0.57
CHKB-CPT1B-201ENST00000452668 MAP3K1Q13233 1512 aa18.63■□□□□ 0.57
CHKB-CPT1B-201ENST00000452668 KANK4Q5T7N3 995 aaPredicted RBP18.62■□□□□ 0.57
CHKB-CPT1B-201ENST00000452668 DNMT1P26358 1616 aaKnown RBP18.61■□□□□ 0.57
CHKB-CPT1B-201ENST00000452668 MYOM3Q5VTT5 1437 aa18.61■□□□□ 0.57
CHKB-CPT1B-201ENST00000452668 NLRP1Q9C000 1473 aa18.6■□□□□ 0.57
CHKB-CPT1B-201ENST00000452668 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.57■□□□□ 0.56
CHKB-CPT1B-201ENST00000452668 SCAF1Q9H7N4 1312 aaKnown RBP18.57■□□□□ 0.56
CHKB-CPT1B-201ENST00000452668 MAST1Q9Y2H9 1570 aa18.57■□□□□ 0.56
CHKB-CPT1B-201ENST00000452668 UGGT1Q9NYU2 1555 aa18.55■□□□□ 0.56
CHKB-CPT1B-201ENST00000452668 TOM1O60784 492 aa18.54■□□□□ 0.56
CHKB-CPT1B-201ENST00000452668 EIF2AK4Q9P2K8 1649 aaKnown RBP18.53■□□□□ 0.56
CHKB-CPT1B-201ENST00000452668 ZC3H13Q5T200 1668 aaKnown RBP18.53■□□□□ 0.56
CHKB-CPT1B-201ENST00000452668 DUOX2Q9NRD8 1548 aa18.53■□□□□ 0.56
CHKB-CPT1B-201ENST00000452668 RNF17Q9BXT8 1623 aaKnown RBP18.52■□□□□ 0.56
CHKB-CPT1B-201ENST00000452668 POLR1AO95602 1720 aaPredicted RBP18.52■□□□□ 0.56
CHKB-CPT1B-201ENST00000452668 RRP7BPQ9NSQ0 103 aa18.52■□□□□ 0.56
CHKB-CPT1B-201ENST00000452668 ABCC3O15438 1527 aa18.52■□□□□ 0.56
CHKB-CPT1B-201ENST00000452668 CPS1P31327 1500 aa18.52■□□□□ 0.56
CHKB-CPT1B-201ENST00000452668 KANK1Q14678 1352 aa18.51■□□□□ 0.55
CHKB-CPT1B-201ENST00000452668 KIF15Q9NS87 1388 aa18.51■□□□□ 0.55
CHKB-CPT1B-201ENST00000452668 NPHP4O75161 1426 aaPredicted RBP18.5■□□□□ 0.55
CHKB-CPT1B-201ENST00000452668 PIP4K2BP78356 416 aa18.5■□□□□ 0.55
CHKB-CPT1B-201ENST00000452668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.5■□□□□ 0.553e-7■■□□□ 13.1
CHKB-CPT1B-201ENST00000452668 SHANK2Q9UPX8 1470 aa18.5■□□□□ 0.55
CHKB-CPT1B-201ENST00000452668 SPATA31D1Q6ZQQ2 1576 aa18.49■□□□□ 0.55
CHKB-CPT1B-201ENST00000452668 STAG3Q9UJ98 1225 aa18.48■□□□□ 0.55
CHKB-CPT1B-201ENST00000452668 ERVK-7P63135 1459 aa18.47■□□□□ 0.55
CHKB-CPT1B-201ENST00000452668 ERBINQ96RT1 1412 aa18.47■□□□□ 0.55
CHKB-CPT1B-201ENST00000452668 NEURL4Q96JN8 1562 aa18.47■□□□□ 0.55
CHKB-CPT1B-201ENST00000452668 PTPN23Q9H3S7 1636 aa18.46■□□□□ 0.55
CHKB-CPT1B-201ENST00000452668 EID1Q9Y6B2 187 aa18.46■□□□□ 0.55
CHKB-CPT1B-201ENST00000452668 MED14O60244 1454 aa18.46■□□□□ 0.54
CHKB-CPT1B-201ENST00000452668 DEPDC5O75140 1603 aa18.45■□□□□ 0.54
CHKB-CPT1B-201ENST00000452668 ANKRD30AQ9BXX3 1397 aa18.45■□□□□ 0.54
CHKB-CPT1B-201ENST00000452668 ABCC5O15440 1437 aa18.45■□□□□ 0.54
CHKB-CPT1B-201ENST00000452668 ILDR2Q71H61 639 aa18.44■□□□□ 0.54
CHKB-CPT1B-201ENST00000452668 CHIC2Q9UKJ5 165 aa18.44■□□□□ 0.54
CHKB-CPT1B-201ENST00000452668 DAPK1P53355 1430 aa18.43■□□□□ 0.54
CHKB-CPT1B-201ENST00000452668 FGD6Q6ZV73 1430 aa18.43■□□□□ 0.54
CHKB-CPT1B-201ENST00000452668 SOCS7O14512 581 aa18.43■□□□□ 0.54
CHKB-CPT1B-201ENST00000452668 CEP152O94986 1710 aa18.41■□□□□ 0.54
CHKB-CPT1B-201ENST00000452668 TXNDC2Q86VQ3 553 aa18.41■□□□□ 0.54
CHKB-CPT1B-201ENST00000452668 IQGAP1P46940 1657 aa18.41■□□□□ 0.54
CHKB-CPT1B-201ENST00000452668 ARHGAP31Q2M1Z3 1444 aa18.4■□□□□ 0.54
CHKB-CPT1B-201ENST00000452668 FAM50AQ14320 339 aaKnown RBP18.4■□□□□ 0.54
CHKB-CPT1B-201ENST00000452668 MROH1Q8NDA8 1641 aa18.4■□□□□ 0.54
CHKB-CPT1B-201ENST00000452668 PRDM15P57071 1507 aaPredicted RBP18.39■□□□□ 0.54
CHKB-CPT1B-201ENST00000452668 CROCC2H7BZ55 1655 aa18.39■□□□□ 0.53
CHKB-CPT1B-201ENST00000452668 HSPA1LP34931 641 aa18.39■□□□□ 0.53
CHKB-CPT1B-201ENST00000452668 SCAF11Q99590 1463 aaKnown RBP18.39■□□□□ 0.53
CHKB-CPT1B-201ENST00000452668 VWDEQ8N2E2 1590 aa18.38■□□□□ 0.53
CHKB-CPT1B-201ENST00000452668 CFAP65Q6ZU64 1925 aaKnown RBP18.37■□□□□ 0.53
CHKB-CPT1B-201ENST00000452668 UBR1Q8IWV7 1749 aa18.34■□□□□ 0.53
CHKB-CPT1B-201ENST00000452668 LTKP29376 864 aa18.33■□□□□ 0.52
CHKB-CPT1B-201ENST00000452668 BCANQ96GW7 911 aa18.32■□□□□ 0.52
CHKB-CPT1B-201ENST00000452668 PHF23Q9BUL5 403 aaPredicted RBP18.31■□□□□ 0.52
CHKB-CPT1B-201ENST00000452668 SENP3Q9H4L4 574 aaPredicted RBP18.31■□□□□ 0.52
CHKB-CPT1B-201ENST00000452668 SLIT1O75093 1534 aa18.31■□□□□ 0.52
CHKB-CPT1B-201ENST00000452668 TMEM2Q9UHN6 1383 aa18.3■□□□□ 0.52
CHKB-CPT1B-201ENST00000452668 SYNMO15061 1565 aa18.3■□□□□ 0.52
CHKB-CPT1B-201ENST00000452668 LRRC7Q96NW7 1537 aa18.3■□□□□ 0.52
CHKB-CPT1B-201ENST00000452668 ARHGAP23Q9P227 1491 aa18.3■□□□□ 0.52
CHKB-CPT1B-201ENST00000452668 IDI1Q13907 227 aa18.29■□□□□ 0.52
CHKB-CPT1B-201ENST00000452668 SLC52A1Q9NWF4 448 aa18.29■□□□□ 0.52
CHKB-CPT1B-201ENST00000452668 LMTK2Q8IWU2 1503 aa18.28■□□□□ 0.52
CHKB-CPT1B-201ENST00000452668 HDGFP51858 240 aaKnown RBP18.28■□□□□ 0.52
CHKB-CPT1B-201ENST00000452668 EFCAB6Q5THR3 1501 aa18.28■□□□□ 0.52
CHKB-CPT1B-201ENST00000452668 PIK3C2BO00750 1634 aa18.27■□□□□ 0.52
CHKB-CPT1B-201ENST00000452668 ANKRD50Q9ULJ7 1429 aa18.27■□□□□ 0.52
CHKB-CPT1B-201ENST00000452668 ADGRL2O95490 1459 aa18.26■□□□□ 0.51
CHKB-CPT1B-201ENST00000452668 PPP1R15AO75807 674 aaPredicted RBP18.24■□□□□ 0.51
CHKB-CPT1B-201ENST00000452668 MED1Q15648 1581 aaPredicted RBP18.23■□□□□ 0.51
CHKB-CPT1B-201ENST00000452668 PROSER2Q86WR7 435 aaPredicted RBP18.23■□□□□ 0.51
CHKB-CPT1B-201ENST00000452668 KCNA6P17658 529 aa18.22■□□□□ 0.51
CHKB-CPT1B-201ENST00000452668 SLC26A8Q96RN1 970 aa18.22■□□□□ 0.51
CHKB-CPT1B-201ENST00000452668 NOS1P29475 1434 aa18.22■□□□□ 0.51
CHKB-CPT1B-201ENST00000452668 KDM5AP29375 1690 aaKnown RBP18.22■□□□□ 0.51
CHKB-CPT1B-201ENST00000452668 RPRD2Q5VT52 1461 aaKnown RBP18.21■□□□□ 0.51
CHKB-CPT1B-201ENST00000452668 CHGAP10645 457 aaKnown RBP18.21■□□□□ 0.51
CHKB-CPT1B-201ENST00000452668 STRCP1A6NGW2 1772 aa18.21■□□□□ 0.51
CHKB-CPT1B-201ENST00000452668 ADGRB3O60242 1522 aa18.19■□□□□ 0.5
CHKB-CPT1B-201ENST00000452668 TMEM94Q12767 1356 aa18.17■□□□□ 0.5
CHKB-CPT1B-201ENST00000452668 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.17■□□□□ 0.5
CHKB-CPT1B-201ENST00000452668 ITGAEP38570 1179 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms