RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 EIF2AK4Q9P2K8 1649 aaKnown RBP19.59■□□□□ 0.73
CPSF4-208ENST00000452047 NCOA1Q15788 1441 aa19.58■□□□□ 0.72
CPSF4-208ENST00000452047 FGD6Q6ZV73 1430 aa19.58■□□□□ 0.72
CPSF4-208ENST00000452047 CEP170BQ9Y4F5 1589 aaPredicted RBP19.57■□□□□ 0.72
CPSF4-208ENST00000452047 TCOF1Q13428 1488 aaKnown RBP19.57■□□□□ 0.72
CPSF4-208ENST00000452047 SHANK2Q9UPX8 1470 aa19.57■□□□□ 0.72
CPSF4-208ENST00000452047 DNMT1P26358 1616 aaKnown RBP19.56■□□□□ 0.72
CPSF4-208ENST00000452047 CAMSAP1Q5T5Y3 1602 aa19.56■□□□□ 0.72
CPSF4-208ENST00000452047 PZPP20742 1482 aa19.55■□□□□ 0.72
CPSF4-208ENST00000452047 MROH1Q8NDA8 1641 aa19.55■□□□□ 0.72
CPSF4-208ENST00000452047 ABCC5O15440 1437 aa19.55■□□□□ 0.72
CPSF4-208ENST00000452047 FBXO41Q8TF61 875 aa19.55■□□□□ 0.72
CPSF4-208ENST00000452047 PTPRTO14522 1441 aa19.54■□□□□ 0.72
CPSF4-208ENST00000452047 DMRT2Q9Y5R5 561 aa19.54■□□□□ 0.72
CPSF4-208ENST00000452047 ZC3H13Q5T200 1668 aaKnown RBP19.54■□□□□ 0.72
CPSF4-208ENST00000452047 DUOX2Q9NRD8 1548 aa19.53■□□□□ 0.72
CPSF4-208ENST00000452047 DAPK1P53355 1430 aa19.52■□□□□ 0.72
CPSF4-208ENST00000452047 ABCC3O15438 1527 aa19.51■□□□□ 0.71
CPSF4-208ENST00000452047 PLA2R1Q13018 1463 aa19.51■□□□□ 0.71
CPSF4-208ENST00000452047 WASHC2CQ9Y4E1 1318 aa19.51■□□□□ 0.71
CPSF4-208ENST00000452047 A2ML1A8K2U0 1454 aa19.49■□□□□ 0.71
CPSF4-208ENST00000452047 KIF15Q9NS87 1388 aa19.49■□□□□ 0.71
CPSF4-208ENST00000452047 CEP152O94986 1710 aa19.48■□□□□ 0.71
CPSF4-208ENST00000452047 TNRQ92752 1358 aa19.47■□□□□ 0.71
CPSF4-208ENST00000452047 PRDM15P57071 1507 aaPredicted RBP19.47■□□□□ 0.71
CPSF4-208ENST00000452047 FBXO31Q5XUX0 539 aaPredicted RBP19.47■□□□□ 0.71
CPSF4-208ENST00000452047 CERKQ8TCT0 537 aa19.47■□□□□ 0.71
CPSF4-208ENST00000452047 ERBINQ96RT1 1412 aa19.47■□□□□ 0.71
CPSF4-208ENST00000452047 DEPDC5O75140 1603 aa19.45■□□□□ 0.7
CPSF4-208ENST00000452047 SPATA31D1Q6ZQQ2 1576 aa19.44■□□□□ 0.7
CPSF4-208ENST00000452047 LTBP4Q8N2S1 1624 aa19.43■□□□□ 0.7
CPSF4-208ENST00000452047 NLRP1Q9C000 1473 aa19.42■□□□□ 0.7
CPSF4-208ENST00000452047 NCKAP5LQ9HCH0 1330 aa19.42■□□□□ 0.7
CPSF4-208ENST00000452047 POLR1AO95602 1720 aaPredicted RBP19.42■□□□□ 0.7
CPSF4-208ENST00000452047 PKD2Q13563 968 aa19.41■□□□□ 0.7
CPSF4-208ENST00000452047 RRP7BPQ9NSQ0 103 aa19.41■□□□□ 0.7
CPSF4-208ENST00000452047 ADGRL2O95490 1459 aa19.41■□□□□ 0.7
CPSF4-208ENST00000452047 ERVK-7P63135 1459 aa19.41■□□□□ 0.7
CPSF4-208ENST00000452047 ANKRD30AQ9BXX3 1397 aa19.4■□□□□ 0.7
CPSF4-208ENST00000452047 NEURL4Q96JN8 1562 aa19.39■□□□□ 0.69
CPSF4-208ENST00000452047 UGGT1Q9NYU2 1555 aa19.37■□□□□ 0.69
CPSF4-208ENST00000452047 VWDEQ8N2E2 1590 aa19.36■□□□□ 0.69
CPSF4-208ENST00000452047 ARHGAP31Q2M1Z3 1444 aa19.36■□□□□ 0.69
CPSF4-208ENST00000452047 CHIC2Q9UKJ5 165 aa19.36■□□□□ 0.69
CPSF4-208ENST00000452047 CFAP65Q6ZU64 1925 aaKnown RBP19.35■□□□□ 0.69
CPSF4-208ENST00000452047 FAM50AQ14320 339 aaKnown RBP19.34■□□□□ 0.69
CPSF4-208ENST00000452047 LMTK2Q8IWU2 1503 aa19.33■□□□□ 0.68
CPSF4-208ENST00000452047 IQSEC2Q5JU85 1478 aa19.33■□□□□ 0.68
CPSF4-208ENST00000452047 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.32■□□□□ 0.68
CPSF4-208ENST00000452047 UBR1Q8IWV7 1749 aa19.32■□□□□ 0.68
CPSF4-208ENST00000452047 ZNF335Q9H4Z2 1342 aaPredicted RBP19.31■□□□□ 0.68
CPSF4-208ENST00000452047 THEMISQ8N1K5 641 aaPredicted RBP19.3■□□□□ 0.68
CPSF4-208ENST00000452047 KANK1Q14678 1352 aa19.3■□□□□ 0.68
CPSF4-208ENST00000452047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.29■□□□□ 0.685e-6■□□□□ 8.1
CPSF4-208ENST00000452047 MED14O60244 1454 aa19.28■□□□□ 0.68
CPSF4-208ENST00000452047 EFCAB6Q5THR3 1501 aa19.28■□□□□ 0.68
CPSF4-208ENST00000452047 ANKRD50Q9ULJ7 1429 aa19.27■□□□□ 0.68
CPSF4-208ENST00000452047 ANKLE2Q86XL3 938 aa19.26■□□□□ 0.67
CPSF4-208ENST00000452047 IQGAP1P46940 1657 aa19.26■□□□□ 0.67
CPSF4-208ENST00000452047 PIK3C2BO00750 1634 aa19.25■□□□□ 0.67
CPSF4-208ENST00000452047 SYNMO15061 1565 aa19.24■□□□□ 0.67
CPSF4-208ENST00000452047 NPHP4O75161 1426 aaPredicted RBP19.24■□□□□ 0.67
CPSF4-208ENST00000452047 UNC13BO14795 1591 aa19.23■□□□□ 0.67
CPSF4-208ENST00000452047 ROCK1Q13464 1354 aa19.23■□□□□ 0.67
CPSF4-208ENST00000452047 KDM5AP29375 1690 aaKnown RBP19.23■□□□□ 0.67
CPSF4-208ENST00000452047 ARHGAP23Q9P227 1491 aa19.22■□□□□ 0.67
CPSF4-208ENST00000452047 SLIT1O75093 1534 aa19.22■□□□□ 0.67
CPSF4-208ENST00000452047 TET3O43151 1660 aa19.21■□□□□ 0.67
CPSF4-208ENST00000452047 NOS1P29475 1434 aa19.21■□□□□ 0.67
CPSF4-208ENST00000452047 PPARGC1BQ86YN6 1023 aaKnown RBP19.21■□□□□ 0.67
CPSF4-208ENST00000452047 CPS1P31327 1500 aa19.2■□□□□ 0.66
CPSF4-208ENST00000452047 RPRD2Q5VT52 1461 aaKnown RBP19.19■□□□□ 0.66
CPSF4-208ENST00000452047 SCAF11Q99590 1463 aaKnown RBP19.19■□□□□ 0.66
CPSF4-208ENST00000452047 GCC2Q8IWJ2 1684 aa19.19■□□□□ 0.66
CPSF4-208ENST00000452047 STRCP1A6NGW2 1772 aa19.16■□□□□ 0.66
CPSF4-208ENST00000452047 IQGAP3Q86VI3 1631 aa19.16■□□□□ 0.66
CPSF4-208ENST00000452047 ADGRB3O60242 1522 aa19.15■□□□□ 0.66
CPSF4-208ENST00000452047 LTKP29376 864 aa19.14■□□□□ 0.65
CPSF4-208ENST00000452047 IDI1Q13907 227 aa19.14■□□□□ 0.65
CPSF4-208ENST00000452047 TMEM2Q9UHN6 1383 aa19.14■□□□□ 0.65
CPSF4-208ENST00000452047 RRBP1Q9P2E9 1410 aaKnown RBP19.14■□□□□ 0.65
CPSF4-208ENST00000452047 E9PCH4 1651 aa19.13■□□□□ 0.65
CPSF4-208ENST00000452047 ITGAEP38570 1179 aa19.1■□□□□ 0.65
CPSF4-208ENST00000452047 TXNDC2Q86VQ3 553 aa19.1■□□□□ 0.65
CPSF4-208ENST00000452047 MYO5BQ9ULV0 1848 aa19.09■□□□□ 0.65
CPSF4-208ENST00000452047 UBAP1LF5GYI3 381 aa19.09■□□□□ 0.65
CPSF4-208ENST00000452047 SLC52A1Q9NWF4 448 aa19.09■□□□□ 0.65
CPSF4-208ENST00000452047 STAG3Q9UJ98 1225 aa19.08■□□□□ 0.64
CPSF4-208ENST00000452047 EID1Q9Y6B2 187 aa19.07■□□□□ 0.64
CPSF4-208ENST00000452047 TMEM131LA2VDJ0 1609 aa19.07■□□□□ 0.64
CPSF4-208ENST00000452047 LRRC7Q96NW7 1537 aa19.06■□□□□ 0.64
CPSF4-208ENST00000452047 ALKQ9UM73 1620 aa19.06■□□□□ 0.64
CPSF4-208ENST00000452047 NUP155O75694 1391 aa19.04■□□□□ 0.64
CPSF4-208ENST00000452047 ZFYVE9O95405 1425 aa19.03■□□□□ 0.64
CPSF4-208ENST00000452047 XIRP1Q702N8 1843 aaKnown RBP19.02■□□□□ 0.64
CPSF4-208ENST00000452047 NAIPQ13075 1403 aa19■□□□□ 0.63
CPSF4-208ENST00000452047 SPHKAPQ2M3C7 1700 aa19■□□□□ 0.63
CPSF4-208ENST00000452047 TOM1O60784 492 aa18.98■□□□□ 0.63
CPSF4-208ENST00000452047 NWD1Q149M9 1564 aa18.98■□□□□ 0.63
CPSF4-208ENST00000452047 RIMS2Q9UQ26 1411 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms