RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 TIMELESSQ9UNS1 1208 aa16.36■□□□□ 0.21
NDUFA3-209ENST00000451517 IQGAP3Q86VI3 1631 aa16.36■□□□□ 0.21
NDUFA3-209ENST00000451517 A2MP01023 1474 aa16.35■□□□□ 0.21
NDUFA3-209ENST00000451517 DEPDC5O75140 1603 aa16.35■□□□□ 0.21
NDUFA3-209ENST00000451517 ABCA6Q8N139 1617 aa16.35■□□□□ 0.21
NDUFA3-209ENST00000451517 PKD2Q13563 968 aa16.34■□□□□ 0.21
NDUFA3-209ENST00000451517 NEUROD1Q13562 356 aa16.33■□□□□ 0.2
NDUFA3-209ENST00000451517 FOXD1Q16676 465 aa16.33■□□□□ 0.2
NDUFA3-209ENST00000451517 DIP2CQ9Y2E4 1556 aa16.33■□□□□ 0.2
NDUFA3-209ENST00000451517 BCORL1Q5H9F3 1711 aa16.31■□□□□ 0.2
NDUFA3-209ENST00000451517 VWDEQ8N2E2 1590 aa16.3■□□□□ 0.2
NDUFA3-209ENST00000451517 PRDM15P57071 1507 aaPredicted RBP16.3■□□□□ 0.2
NDUFA3-209ENST00000451517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.3■□□□□ 0.23e-6■■□□□ 11.7
NDUFA3-209ENST00000451517 MROH1Q8NDA8 1641 aa16.3■□□□□ 0.2
NDUFA3-209ENST00000451517 YEATS2Q9ULM3 1422 aa16.29■□□□□ 0.2
NDUFA3-209ENST00000451517 RNF17Q9BXT8 1623 aaKnown RBP16.29■□□□□ 0.2
NDUFA3-209ENST00000451517 RPRD2Q5VT52 1461 aaKnown RBP16.29■□□□□ 0.2
NDUFA3-209ENST00000451517 COL17A1Q9UMD9 1497 aaPredicted RBP16.29■□□□□ 0.2
NDUFA3-209ENST00000451517 KIF3BO15066 747 aa16.28■□□□□ 0.2
NDUFA3-209ENST00000451517 KANK1Q14678 1352 aa16.26■□□□□ 0.19
NDUFA3-209ENST00000451517 TONSLQ96HA7 1378 aa16.26■□□□□ 0.19
NDUFA3-209ENST00000451517 REREQ9P2R6 1566 aa16.25■□□□□ 0.19
NDUFA3-209ENST00000451517 LMTK2Q8IWU2 1503 aa16.24■□□□□ 0.19
NDUFA3-209ENST00000451517 ATP10AO60312 1499 aa16.23■□□□□ 0.19
NDUFA3-209ENST00000451517 TET3O43151 1660 aa16.23■□□□□ 0.19
NDUFA3-209ENST00000451517 PPP1R15AO75807 674 aaPredicted RBP16.22■□□□□ 0.19
NDUFA3-209ENST00000451517 PLA2R1Q13018 1463 aa16.22■□□□□ 0.19
NDUFA3-209ENST00000451517 ARHGEF40Q8TER5 1519 aa16.21■□□□□ 0.19
NDUFA3-209ENST00000451517 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
NDUFA3-209ENST00000451517 E9PCH4 1651 aa16.2■□□□□ 0.18
NDUFA3-209ENST00000451517 AGLP35573 1532 aa16.19■□□□□ 0.18
NDUFA3-209ENST00000451517 EFCAB6Q5THR3 1501 aa16.19■□□□□ 0.18
NDUFA3-209ENST00000451517 PTPRTO14522 1441 aa16.18■□□□□ 0.18
NDUFA3-209ENST00000451517 L3MBTL2Q969R5 705 aa16.17■□□□□ 0.18
NDUFA3-209ENST00000451517 ABCC3O15438 1527 aa16.17■□□□□ 0.18
NDUFA3-209ENST00000451517 CCDC144AA2RUR9 1427 aa16.16■□□□□ 0.18
NDUFA3-209ENST00000451517 TRPM2O94759 1503 aa16.15■□□□□ 0.18
NDUFA3-209ENST00000451517 CEP152O94986 1710 aa16.15■□□□□ 0.18
NDUFA3-209ENST00000451517 GGT6Q6P531 493 aa16.15■□□□□ 0.18
NDUFA3-209ENST00000451517 ZC3H13Q5T200 1668 aaKnown RBP16.13■□□□□ 0.17
NDUFA3-209ENST00000451517 SPHKAPQ2M3C7 1700 aa16.13■□□□□ 0.17
NDUFA3-209ENST00000451517 ZNF316A6NFI3 1004 aaPredicted RBP16.12■□□□□ 0.17
NDUFA3-209ENST00000451517 SIGLEC1Q9BZZ2 1709 aa16.11■□□□□ 0.17
NDUFA3-209ENST00000451517 WASHC2CQ9Y4E1 1318 aa16.11■□□□□ 0.17
NDUFA3-209ENST00000451517 CAMSAP1Q5T5Y3 1602 aa16.1■□□□□ 0.17
NDUFA3-209ENST00000451517 NPATQ14207 1427 aa16.1■□□□□ 0.17
NDUFA3-209ENST00000451517 ARHGAP31Q2M1Z3 1444 aa16.1■□□□□ 0.17
NDUFA3-209ENST00000451517 PPP6R1Q9UPN7 881 aa16.09■□□□□ 0.17
NDUFA3-209ENST00000451517 CLTCL1P53675 1640 aa16.08■□□□□ 0.16
NDUFA3-209ENST00000451517 UHRF1BP1Q6BDS2 1440 aa16.07■□□□□ 0.16
NDUFA3-209ENST00000451517 SPATA31E1Q6ZUB1 1445 aa16.07■□□□□ 0.16
NDUFA3-209ENST00000451517 CNTLNQ9NXG0 1405 aa16.06■□□□□ 0.16
NDUFA3-209ENST00000451517 NEURL4Q96JN8 1562 aa16.05■□□□□ 0.16
NDUFA3-209ENST00000451517 NOS1P29475 1434 aa16.05■□□□□ 0.16
NDUFA3-209ENST00000451517 NBPF8Q3BBV2 869 aa16.05■□□□□ 0.16
NDUFA3-209ENST00000451517 UGGT1Q9NYU2 1555 aa16.01■□□□□ 0.15
NDUFA3-209ENST00000451517 SYNMO15061 1565 aa16■□□□□ 0.15
NDUFA3-209ENST00000451517 RGL3Q3MIN7 710 aa15.99■□□□□ 0.15
NDUFA3-209ENST00000451517 DCAF11Q8TEB1 546 aa15.99■□□□□ 0.15
NDUFA3-209ENST00000451517 CLTCQ00610 1675 aaKnown RBP15.99■□□□□ 0.15
NDUFA3-209ENST00000451517 PIK3C2BO00750 1634 aa15.98■□□□□ 0.15
NDUFA3-209ENST00000451517 PRAG1Q86YV5 1406 aa15.98■□□□□ 0.15
NDUFA3-209ENST00000451517 ADGRB3O60242 1522 aa15.98■□□□□ 0.15
NDUFA3-209ENST00000451517 RALGAPBQ86X10 1494 aa15.97■□□□□ 0.15
NDUFA3-209ENST00000451517 MLECQ14165 292 aa15.97■□□□□ 0.15
NDUFA3-209ENST00000451517 PREX1Q8TCU6 1659 aa15.97■□□□□ 0.15
NDUFA3-209ENST00000451517 ERVK-7P63135 1459 aa15.97■□□□□ 0.15
NDUFA3-209ENST00000451517 STAC3Q96MF2 364 aa15.96■□□□□ 0.15
NDUFA3-209ENST00000451517 ARID4BQ4LE39 1312 aaPredicted RBP15.95■□□□□ 0.14
NDUFA3-209ENST00000451517 KDM2AQ9Y2K7 1162 aa15.95■□□□□ 0.14
NDUFA3-209ENST00000451517 KIF1BO60333 1816 aa15.95■□□□□ 0.14
NDUFA3-209ENST00000451517 SPATA31D1Q6ZQQ2 1576 aa15.94■□□□□ 0.14
NDUFA3-209ENST00000451517 MROH2AA6NES4 1674 aa15.93■□□□□ 0.14
NDUFA3-209ENST00000451517 ZNF326Q5BKZ1 582 aaKnown RBP15.93■□□□□ 0.14
NDUFA3-209ENST00000451517 SLC52A1Q9NWF4 448 aa15.93■□□□□ 0.14
NDUFA3-209ENST00000451517 TRPM1Q7Z4N2 1603 aa15.92■□□□□ 0.14
NDUFA3-209ENST00000451517 MYOM2P54296 1465 aa15.91■□□□□ 0.14
NDUFA3-209ENST00000451517 ZMYM3Q14202 1370 aa15.91■□□□□ 0.14
NDUFA3-209ENST00000451517 MADDQ8WXG6 1647 aa15.91■□□□□ 0.14
NDUFA3-209ENST00000451517 EIF4G2P78344 907 aaKnown RBP eCLIP15.91■□□□□ 0.14
NDUFA3-209ENST00000451517 FBXO31Q5XUX0 539 aaPredicted RBP15.91■□□□□ 0.14
NDUFA3-209ENST00000451517 ESF1Q9H501 851 aaKnown RBP15.91■□□□□ 0.14
NDUFA3-209ENST00000451517 HSPA5P11021 654 aaKnown RBP15.9■□□□□ 0.14
NDUFA3-209ENST00000451517 IFT172Q9UG01 1749 aa15.9■□□□□ 0.14
NDUFA3-209ENST00000451517 CFAP65Q6ZU64 1925 aaKnown RBP15.9■□□□□ 0.14
NDUFA3-209ENST00000451517 GPRASP1Q5JY77 1395 aa15.89■□□□□ 0.13
NDUFA3-209ENST00000451517 IDI1Q13907 227 aa15.89■□□□□ 0.13
NDUFA3-209ENST00000451517 DIEXFQ68CQ4 756 aaKnown RBP15.89■□□□□ 0.13
NDUFA3-209ENST00000451517 RPGRIP1LQ68CZ1 1315 aa15.89■□□□□ 0.13
NDUFA3-209ENST00000451517 LAMC1P11047 1609 aa15.87■□□□□ 0.13
NDUFA3-209ENST00000451517 NRXN1Q9ULB1 1477 aa15.87■□□□□ 0.13
NDUFA3-209ENST00000451517 HIRIP3Q9BW71 556 aaPredicted RBP15.87■□□□□ 0.13
NDUFA3-209ENST00000451517 ROCK2O75116 1388 aaKnown RBP15.87■□□□□ 0.13
NDUFA3-209ENST00000451517 TMEM131LA2VDJ0 1609 aa15.86■□□□□ 0.13
NDUFA3-209ENST00000451517 CHGAP10645 457 aaKnown RBP15.86■□□□□ 0.13
NDUFA3-209ENST00000451517 USP47Q96K76 1375 aa15.86■□□□□ 0.13
NDUFA3-209ENST00000451517 CARD11Q9BXL7 1154 aa15.85■□□□□ 0.13
NDUFA3-209ENST00000451517 PPLO60437 1756 aa15.85■□□□□ 0.13
NDUFA3-209ENST00000451517 NEXMIFQ5QGS0 1516 aa15.84■□□□□ 0.13
NDUFA3-209ENST00000451517 KIAA1210Q9ULL0 1709 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms