RNA–Protein interactions for RNA: ENST00000450271.5

PBRM1-217, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-217ENST00000450271 ZNF142P52746 1687 aaPredicted RBP41.37■■■■■ 4.21
PBRM1-217ENST00000450271 KDM5DQ9BY66 1539 aa41.34■■■■■ 4.21
PBRM1-217ENST00000450271 CEP170BQ9Y4F5 1589 aaPredicted RBP41.33■■■■■ 4.21
PBRM1-217ENST00000450271 APLP2Q06481 763 aa41.3■■■■■ 4.2
PBRM1-217ENST00000450271 PLA2R1Q13018 1463 aa41.28■■■■■ 4.2
PBRM1-217ENST00000450271 WASHC2CQ9Y4E1 1318 aa41.27■■■■■ 4.2
PBRM1-217ENST00000450271 PZPP20742 1482 aa41.27■■■■■ 4.2
PBRM1-217ENST00000450271 NCKAP5LQ9HCH0 1330 aa41.23■■■■■ 4.19
PBRM1-217ENST00000450271 A2ML1A8K2U0 1454 aa41.23■■■■■ 4.19
PBRM1-217ENST00000450271 FBXO31Q5XUX0 539 aaPredicted RBP41.23■■■■■ 4.19
PBRM1-217ENST00000450271 RNF17Q9BXT8 1623 aaKnown RBP41.22■■■■■ 4.19
PBRM1-217ENST00000450271 TCOF1Q13428 1488 aaKnown RBP41.21■■■■■ 4.19
PBRM1-217ENST00000450271 TNRQ92752 1358 aa41.2■■■■■ 4.19
PBRM1-217ENST00000450271 LTBP4Q8N2S1 1624 aa41.18■■■■■ 4.18
PBRM1-217ENST00000450271 PKD2Q13563 968 aa41.18■■■■■ 4.18
PBRM1-217ENST00000450271 PTPN23Q9H3S7 1636 aa41.16■■■■■ 4.18
PBRM1-217ENST00000450271 EIF2AK4Q9P2K8 1649 aaKnown RBP41.16■■■■■ 4.18
PBRM1-217ENST00000450271 DNMT1P26358 1616 aaKnown RBP41.15■■■■■ 4.18
PBRM1-217ENST00000450271 ABCC5O15440 1437 aa41.15■■■■■ 4.18
PBRM1-217ENST00000450271 SHANK2Q9UPX8 1470 aa41.13■■■■■ 4.17
PBRM1-217ENST00000450271 ABCC3O15438 1527 aa41.12■■■■■ 4.17
PBRM1-217ENST00000450271 DUOX2Q9NRD8 1548 aa41.12■■■■■ 4.17
PBRM1-217ENST00000450271 FGD6Q6ZV73 1430 aa41.11■■■■■ 4.17
PBRM1-217ENST00000450271 MROH1Q8NDA8 1641 aa41.09■■■■■ 4.17
PBRM1-217ENST00000450271 CROCC2H7BZ55 1655 aa41.08■■■■■ 4.17
PBRM1-217ENST00000450271 KIF15Q9NS87 1388 aa41.06■■■■■ 4.16
PBRM1-217ENST00000450271 ZC3H13Q5T200 1668 aaKnown RBP41.06■■■■■ 4.16
PBRM1-217ENST00000450271 DAPK1P53355 1430 aa41.05■■■■■ 4.16
PBRM1-217ENST00000450271 NLRP1Q9C000 1473 aa41.03■■■■■ 4.16
PBRM1-217ENST00000450271 ZNF335Q9H4Z2 1342 aaPredicted RBP41■■■■■ 4.15
PBRM1-217ENST00000450271 IQSEC2Q5JU85 1478 aa41■■■■■ 4.15
PBRM1-217ENST00000450271 RRP7BPQ9NSQ0 103 aa40.99■■■■■ 4.15
PBRM1-217ENST00000450271 ERBINQ96RT1 1412 aa40.99■■■■■ 4.15
PBRM1-217ENST00000450271 SPATA31D1Q6ZQQ2 1576 aa40.97■■■■■ 4.15
PBRM1-217ENST00000450271 ERVK-7P63135 1459 aa40.94■■■■■ 4.14
PBRM1-217ENST00000450271 PRDM15P57071 1507 aaPredicted RBP40.93■■■■■ 4.14
PBRM1-217ENST00000450271 NEURL4Q96JN8 1562 aa40.92■■■■■ 4.14
PBRM1-217ENST00000450271 UGGT1Q9NYU2 1555 aa40.92■■■■■ 4.14
PBRM1-217ENST00000450271 THEMISQ8N1K5 641 aaPredicted RBP40.92■■■■■ 4.14
PBRM1-217ENST00000450271 CEP152O94986 1710 aa40.92■■■■■ 4.14
PBRM1-217ENST00000450271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.91■■■■■ 4.14
PBRM1-217ENST00000450271 POLR1AO95602 1720 aaPredicted RBP40.9■■■■■ 4.14
PBRM1-217ENST00000450271 ANKRD30AQ9BXX3 1397 aa40.86■■■■■ 4.13
PBRM1-217ENST00000450271 ANKLE2Q86XL3 938 aa40.85■■■■■ 4.13
PBRM1-217ENST00000450271 CHIC2Q9UKJ5 165 aa40.85■■■■■ 4.13
PBRM1-217ENST00000450271 ARHGAP31Q2M1Z3 1444 aa40.84■■■■■ 4.13
PBRM1-217ENST00000450271 DEPDC5O75140 1603 aa40.83■■■■■ 4.13
PBRM1-217ENST00000450271 MED14O60244 1454 aa40.78■■■■■ 4.12
PBRM1-217ENST00000450271 ADGRL2O95490 1459 aa40.77■■■■■ 4.12
PBRM1-217ENST00000450271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.77■■■■■ 4.121e-6■■□□□ 12.1
PBRM1-217ENST00000450271 CFAP65Q6ZU64 1925 aaKnown RBP40.76■■■■■ 4.12
PBRM1-217ENST00000450271 FAM50AQ14320 339 aaKnown RBP40.73■■■■■ 4.11
PBRM1-217ENST00000450271 NPHP4O75161 1426 aaPredicted RBP40.73■■■■■ 4.11
PBRM1-217ENST00000450271 KANK1Q14678 1352 aa40.73■■■■■ 4.11
PBRM1-217ENST00000450271 VWDEQ8N2E2 1590 aa40.7■■■■■ 4.11
PBRM1-217ENST00000450271 LMTK2Q8IWU2 1503 aa40.7■■■■■ 4.11
PBRM1-217ENST00000450271 UBR1Q8IWV7 1749 aa40.67■■■■■ 4.1
PBRM1-217ENST00000450271 CPS1P31327 1500 aa40.66■■■■■ 4.1
PBRM1-217ENST00000450271 UBAP1LF5GYI3 381 aa40.64■■■■■ 4.1
PBRM1-217ENST00000450271 IQGAP1P46940 1657 aa40.63■■■■■ 4.1
PBRM1-217ENST00000450271 ANKRD50Q9ULJ7 1429 aa40.59■■■■■ 4.09
PBRM1-217ENST00000450271 ARHGAP23Q9P227 1491 aa40.58■■■■■ 4.09
PBRM1-217ENST00000450271 SLIT1O75093 1534 aa40.57■■■■■ 4.08
PBRM1-217ENST00000450271 SCAF11Q99590 1463 aaKnown RBP40.56■■■■■ 4.08
PBRM1-217ENST00000450271 EFCAB6Q5THR3 1501 aa40.54■■■■■ 4.08
PBRM1-217ENST00000450271 LTKP29376 864 aa40.52■■■■■ 4.08
PBRM1-217ENST00000450271 PIK3C2BO00750 1634 aa40.52■■■■■ 4.08
PBRM1-217ENST00000450271 NOS1P29475 1434 aa40.5■■■■■ 4.07
PBRM1-217ENST00000450271 SYNMO15061 1565 aa40.48■■■■■ 4.07
PBRM1-217ENST00000450271 IDI1Q13907 227 aa40.47■■■■■ 4.07
PBRM1-217ENST00000450271 TXNDC2Q86VQ3 553 aa40.47■■■■■ 4.07
PBRM1-217ENST00000450271 TMEM2Q9UHN6 1383 aa40.45■■■■■ 4.07
PBRM1-217ENST00000450271 KDM5AP29375 1690 aaKnown RBP40.43■■■■■ 4.06
PBRM1-217ENST00000450271 ROCK1Q13464 1354 aa40.43■■■■■ 4.06
PBRM1-217ENST00000450271 STRCP1A6NGW2 1772 aa40.42■■■■■ 4.06
PBRM1-217ENST00000450271 STAG3Q9UJ98 1225 aa40.41■■■■■ 4.06
PBRM1-217ENST00000450271 EID1Q9Y6B2 187 aa40.41■■■■■ 4.06
PBRM1-217ENST00000450271 RPRD2Q5VT52 1461 aaKnown RBP40.4■■■■■ 4.06
PBRM1-217ENST00000450271 DISP3Q9P2K9 1392 aa40.39■■■■■ 4.06
PBRM1-217ENST00000450271 TOM1O60784 492 aa40.39■■■■■ 4.06
PBRM1-217ENST00000450271 LRRC7Q96NW7 1537 aa40.37■■■■■ 4.05
PBRM1-217ENST00000450271 UNC13BO14795 1591 aa40.35■■■■■ 4.05
PBRM1-217ENST00000450271 PPARGC1BQ86YN6 1023 aaKnown RBP40.35■■■■■ 4.05
PBRM1-217ENST00000450271 SLC52A1Q9NWF4 448 aa40.35■■■■■ 4.05
PBRM1-217ENST00000450271 TET3O43151 1660 aa40.34■■■■■ 4.05
PBRM1-217ENST00000450271 ADGRB3O60242 1522 aa40.32■■■■■ 4.05
PBRM1-217ENST00000450271 PIP4K2BP78356 416 aa40.31■■■■■ 4.04
PBRM1-217ENST00000450271 ALKQ9UM73 1620 aa40.31■■■■■ 4.04
PBRM1-217ENST00000450271 SCAF1Q9H7N4 1312 aaKnown RBP40.28■■■■■ 4.04
PBRM1-217ENST00000450271 GCC2Q8IWJ2 1684 aa40.25■■■■■ 4.03
PBRM1-217ENST00000450271 ITGAEP38570 1179 aa40.23■■■■■ 4.03
PBRM1-217ENST00000450271 HSPA1LP34931 641 aa40.22■■■■■ 4.03
PBRM1-217ENST00000450271 IQGAP3Q86VI3 1631 aa40.19■■■■■ 4.02
PBRM1-217ENST00000450271 ILDR2Q71H61 639 aa40.18■■■■■ 4.02
PBRM1-217ENST00000450271 E9PCH4 1651 aa40.16■■■■■ 4.02
PBRM1-217ENST00000450271 ZFYVE9O95405 1425 aa40.14■■■■■ 4.02
PBRM1-217ENST00000450271 NUP155O75694 1391 aa40.13■■■■■ 4.02
PBRM1-217ENST00000450271 SLC26A8Q96RN1 970 aa40.12■■■■■ 4.01
PBRM1-217ENST00000450271 TMEM131LA2VDJ0 1609 aa40.12■■■■■ 4.01
PBRM1-217ENST00000450271 RRBP1Q9P2E9 1410 aaKnown RBP40.1■■■■■ 4.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms