RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 PPARGC1BQ86YN6 1023 aaKnown RBP18.47■□□□□ 0.55
LSP1P3-201ENST00000449530 DUOX2Q9NRD8 1548 aa18.46■□□□□ 0.55
LSP1P3-201ENST00000449530 KDM5DQ9BY66 1539 aa18.45■□□□□ 0.54
LSP1P3-201ENST00000449530 KIF3BO15066 747 aa18.45■□□□□ 0.54
LSP1P3-201ENST00000449530 FAM50AQ14320 339 aaKnown RBP18.45■□□□□ 0.54
LSP1P3-201ENST00000449530 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
LSP1P3-201ENST00000449530 KIF15Q9NS87 1388 aa18.43■□□□□ 0.54
LSP1P3-201ENST00000449530 MROH1Q8NDA8 1641 aa18.42■□□□□ 0.54
LSP1P3-201ENST00000449530 ZC3H13Q5T200 1668 aaKnown RBP18.42■□□□□ 0.54
LSP1P3-201ENST00000449530 ZMYM3Q14202 1370 aa18.41■□□□□ 0.54
LSP1P3-201ENST00000449530 UHRF1BP1Q6BDS2 1440 aa18.4■□□□□ 0.54
LSP1P3-201ENST00000449530 CEP152O94986 1710 aa18.4■□□□□ 0.54
LSP1P3-201ENST00000449530 MYO3AQ8NEV4 1616 aa18.4■□□□□ 0.54
LSP1P3-201ENST00000449530 SETD1BQ9UPS6 1966 aaKnown RBP18.4■□□□□ 0.54
LSP1P3-201ENST00000449530 ERBINQ96RT1 1412 aa18.4■□□□□ 0.54
LSP1P3-201ENST00000449530 NPATQ14207 1427 aa18.39■□□□□ 0.53
LSP1P3-201ENST00000449530 ADGRL2O95490 1459 aa18.39■□□□□ 0.53
LSP1P3-201ENST00000449530 RRP7BPQ9NSQ0 103 aa18.38■□□□□ 0.53
LSP1P3-201ENST00000449530 CHIC2Q9UKJ5 165 aa18.38■□□□□ 0.53
LSP1P3-201ENST00000449530 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
LSP1P3-201ENST00000449530 ANKRD30AQ9BXX3 1397 aa18.38■□□□□ 0.53
LSP1P3-201ENST00000449530 ABCC3O15438 1527 aa18.38■□□□□ 0.53
LSP1P3-201ENST00000449530 PRDM15P57071 1507 aaPredicted RBP18.37■□□□□ 0.53
LSP1P3-201ENST00000449530 DEPDC5O75140 1603 aa18.37■□□□□ 0.53
LSP1P3-201ENST00000449530 ZNF142P52746 1687 aaPredicted RBP18.36■□□□□ 0.53
LSP1P3-201ENST00000449530 PTPRKQ15262 1439 aa18.36■□□□□ 0.53
LSP1P3-201ENST00000449530 CAMSAP1Q5T5Y3 1602 aa18.35■□□□□ 0.53
LSP1P3-201ENST00000449530 NCOA1Q15788 1441 aa18.35■□□□□ 0.53
LSP1P3-201ENST00000449530 PZPP20742 1482 aa18.33■□□□□ 0.53
LSP1P3-201ENST00000449530 WASHC2CQ9Y4E1 1318 aa18.33■□□□□ 0.53
LSP1P3-201ENST00000449530 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
LSP1P3-201ENST00000449530 CEP170BQ9Y4F5 1589 aaPredicted RBP18.32■□□□□ 0.52
LSP1P3-201ENST00000449530 RRBP1Q9P2E9 1410 aaKnown RBP18.29■□□□□ 0.52
LSP1P3-201ENST00000449530 STRCQ7RTU9 1775 aa18.29■□□□□ 0.52
LSP1P3-201ENST00000449530 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.29■□□□□ 0.52
LSP1P3-201ENST00000449530 SPATA31D1Q6ZQQ2 1576 aa18.28■□□□□ 0.52
LSP1P3-201ENST00000449530 ITGAEP38570 1179 aa18.27■□□□□ 0.52
LSP1P3-201ENST00000449530 TNRQ92752 1358 aa18.27■□□□□ 0.51
LSP1P3-201ENST00000449530 ANKRD50Q9ULJ7 1429 aa18.26■□□□□ 0.51
LSP1P3-201ENST00000449530 VWDEQ8N2E2 1590 aa18.25■□□□□ 0.51
LSP1P3-201ENST00000449530 FBXO31Q5XUX0 539 aaPredicted RBP18.25■□□□□ 0.51
LSP1P3-201ENST00000449530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.25■□□□□ 0.51
LSP1P3-201ENST00000449530 ROCK1Q13464 1354 aa18.25■□□□□ 0.51
LSP1P3-201ENST00000449530 CFAP65Q6ZU64 1925 aaKnown RBP18.25■□□□□ 0.51
LSP1P3-201ENST00000449530 KANK1Q14678 1352 aa18.24■□□□□ 0.51
LSP1P3-201ENST00000449530 A2ML1A8K2U0 1454 aa18.24■□□□□ 0.51
LSP1P3-201ENST00000449530 ERVK-7P63135 1459 aa18.24■□□□□ 0.51
LSP1P3-201ENST00000449530 UNC13BO14795 1591 aa18.24■□□□□ 0.51
LSP1P3-201ENST00000449530 EFCAB6Q5THR3 1501 aa18.22■□□□□ 0.51
LSP1P3-201ENST00000449530 LMTK2Q8IWU2 1503 aa18.22■□□□□ 0.51
LSP1P3-201ENST00000449530 GCC2Q8IWJ2 1684 aa18.19■□□□□ 0.5
LSP1P3-201ENST00000449530 ARHGAP31Q2M1Z3 1444 aa18.19■□□□□ 0.5
LSP1P3-201ENST00000449530 NLRP1Q9C000 1473 aa18.19■□□□□ 0.5
LSP1P3-201ENST00000449530 TET3O43151 1660 aa18.18■□□□□ 0.5
LSP1P3-201ENST00000449530 POLR1AO95602 1720 aaPredicted RBP18.18■□□□□ 0.5
LSP1P3-201ENST00000449530 PLA2R1Q13018 1463 aa18.18■□□□□ 0.5
LSP1P3-201ENST00000449530 UGGT1Q9NYU2 1555 aa18.16■□□□□ 0.5
LSP1P3-201ENST00000449530 IQGAP3Q86VI3 1631 aa18.16■□□□□ 0.5
LSP1P3-201ENST00000449530 UBR1Q8IWV7 1749 aa18.15■□□□□ 0.5
LSP1P3-201ENST00000449530 SYNMO15061 1565 aa18.13■□□□□ 0.49
LSP1P3-201ENST00000449530 PIK3C2BO00750 1634 aa18.12■□□□□ 0.49
LSP1P3-201ENST00000449530 PTPRTO14522 1441 aa18.12■□□□□ 0.49
LSP1P3-201ENST00000449530 E9PCH4 1651 aa18.11■□□□□ 0.49
LSP1P3-201ENST00000449530 NEURL4Q96JN8 1562 aa18.1■□□□□ 0.49
LSP1P3-201ENST00000449530 NCKAP5LQ9HCH0 1330 aa18.1■□□□□ 0.49
LSP1P3-201ENST00000449530 RPRD2Q5VT52 1461 aaKnown RBP18.09■□□□□ 0.49
LSP1P3-201ENST00000449530 NAIPQ13075 1403 aa18.08■□□□□ 0.49
LSP1P3-201ENST00000449530 NOS1P29475 1434 aa18.06■□□□□ 0.48
LSP1P3-201ENST00000449530 NUP155O75694 1391 aa18.06■□□□□ 0.48
LSP1P3-201ENST00000449530 PKD2Q13563 968 aa18.06■□□□□ 0.48
LSP1P3-201ENST00000449530 IQSEC2Q5JU85 1478 aa18.06■□□□□ 0.48
LSP1P3-201ENST00000449530 HFM1A2PYH4 1435 aa18.06■□□□□ 0.48
LSP1P3-201ENST00000449530 KDM5AP29375 1690 aaKnown RBP18.06■□□□□ 0.48
LSP1P3-201ENST00000449530 ADGRB3O60242 1522 aa18.05■□□□□ 0.48
LSP1P3-201ENST00000449530 THEMISQ8N1K5 641 aaPredicted RBP18.04■□□□□ 0.48
LSP1P3-201ENST00000449530 LTBP4Q8N2S1 1624 aa18.04■□□□□ 0.48
LSP1P3-201ENST00000449530 IQGAP1P46940 1657 aa18.03■□□□□ 0.48
LSP1P3-201ENST00000449530 MYO5BQ9ULV0 1848 aa18.02■□□□□ 0.48
LSP1P3-201ENST00000449530 SPHKAPQ2M3C7 1700 aa18.01■□□□□ 0.47
LSP1P3-201ENST00000449530 SLIT1O75093 1534 aa18■□□□□ 0.47
LSP1P3-201ENST00000449530 ARHGAP23Q9P227 1491 aa18■□□□□ 0.47
LSP1P3-201ENST00000449530 NPHP4O75161 1426 aaPredicted RBP17.99■□□□□ 0.47
LSP1P3-201ENST00000449530 UBAP1LF5GYI3 381 aa17.99■□□□□ 0.47
LSP1P3-201ENST00000449530 ANKLE2Q86XL3 938 aa17.99■□□□□ 0.47
LSP1P3-201ENST00000449530 SCAF11Q99590 1463 aaKnown RBP17.99■□□□□ 0.47
LSP1P3-201ENST00000449530 MED14O60244 1454 aa17.98■□□□□ 0.47
LSP1P3-201ENST00000449530 IDI1Q13907 227 aa17.97■□□□□ 0.47
LSP1P3-201ENST00000449530 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
LSP1P3-201ENST00000449530 TMEM131LA2VDJ0 1609 aa17.96■□□□□ 0.47
LSP1P3-201ENST00000449530 ZNF335Q9H4Z2 1342 aaPredicted RBP17.96■□□□□ 0.46
LSP1P3-201ENST00000449530 TMEM2Q9UHN6 1383 aa17.94■□□□□ 0.46
LSP1P3-201ENST00000449530 SLC52A1Q9NWF4 448 aa17.94■□□□□ 0.46
LSP1P3-201ENST00000449530 TRIM52Q96A61 297 aa17.92■□□□□ 0.46
LSP1P3-201ENST00000449530 TRPM2O94759 1503 aa17.91■□□□□ 0.46
LSP1P3-201ENST00000449530 CLTCL1P53675 1640 aa17.9■□□□□ 0.46
LSP1P3-201ENST00000449530 LTKP29376 864 aa17.9■□□□□ 0.46
LSP1P3-201ENST00000449530 TXNDC2Q86VQ3 553 aa17.9■□□□□ 0.46
LSP1P3-201ENST00000449530 EID1Q9Y6B2 187 aa17.89■□□□□ 0.45
LSP1P3-201ENST00000449530 STRCP1A6NGW2 1772 aa17.89■□□□□ 0.45
LSP1P3-201ENST00000449530 CPS1P31327 1500 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms