RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 PLXNC1O60486 1568 aa16.4■□□□□ 0.22
LINC02561-201ENST00000449457 MED1Q15648 1581 aaPredicted RBP16.4■□□□□ 0.22
LINC02561-201ENST00000449457 NPATQ14207 1427 aa16.4■□□□□ 0.22
LINC02561-201ENST00000449457 CASKIN1Q8WXD9 1431 aa16.4■□□□□ 0.22
LINC02561-201ENST00000449457 PTPRKQ15262 1439 aa16.39■□□□□ 0.21
LINC02561-201ENST00000449457 CCDC18Q5T9S5 1454 aa16.39■□□□□ 0.21
LINC02561-201ENST00000449457 SPAG9O60271 1321 aaKnown RBP16.39■□□□□ 0.21
LINC02561-201ENST00000449457 TCOF1Q13428 1488 aaKnown RBP16.38■□□□□ 0.21
LINC02561-201ENST00000449457 PIP4K2BP78356 416 aa16.38■□□□□ 0.21
LINC02561-201ENST00000449457 C1QBPQ07021 282 aaKnown RBP16.38■□□□□ 0.21
LINC02561-201ENST00000449457 GGT6Q6P531 493 aa16.38■□□□□ 0.21
LINC02561-201ENST00000449457 GPATCH8Q9UKJ3 1502 aaKnown RBP16.38■□□□□ 0.21
LINC02561-201ENST00000449457 A2MP01023 1474 aa16.36■□□□□ 0.21
LINC02561-201ENST00000449457 HSPA1LP34931 641 aa16.36■□□□□ 0.21
LINC02561-201ENST00000449457 PLA2R1Q13018 1463 aa16.35■□□□□ 0.21
LINC02561-201ENST00000449457 NEURL4Q96JN8 1562 aa16.34■□□□□ 0.21
LINC02561-201ENST00000449457 DNMT1P26358 1616 aaKnown RBP16.34■□□□□ 0.21
LINC02561-201ENST00000449457 ZNF644Q9H582 1327 aaPredicted RBP16.33■□□□□ 0.2
LINC02561-201ENST00000449457 FYCO1Q9BQS8 1478 aa16.33■□□□□ 0.2
LINC02561-201ENST00000449457 POLR1AO95602 1720 aaPredicted RBP16.32■□□□□ 0.2
LINC02561-201ENST00000449457 ADGBQ8N7X0 1667 aa16.3■□□□□ 0.2
LINC02561-201ENST00000449457 ALKQ9UM73 1620 aa16.3■□□□□ 0.2
LINC02561-201ENST00000449457 FBXO31Q5XUX0 539 aaPredicted RBP16.29■□□□□ 0.2
LINC02561-201ENST00000449457 TIAM1Q13009 1591 aa16.29■□□□□ 0.2
LINC02561-201ENST00000449457 A2ML1A8K2U0 1454 aa16.29■□□□□ 0.2
LINC02561-201ENST00000449457 APLP2Q06481 763 aa16.28■□□□□ 0.2
LINC02561-201ENST00000449457 PKD2Q13563 968 aa16.28■□□□□ 0.2
LINC02561-201ENST00000449457 CFDP1Q9UEE9 299 aaPredicted RBP16.27■□□□□ 0.2
LINC02561-201ENST00000449457 CCNB3Q8WWL7 1395 aa16.26■□□□□ 0.19
LINC02561-201ENST00000449457 VWDEQ8N2E2 1590 aa16.25■□□□□ 0.19
LINC02561-201ENST00000449457 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.24■□□□□ 0.19
LINC02561-201ENST00000449457 STRCP1A6NGW2 1772 aa16.23■□□□□ 0.19
LINC02561-201ENST00000449457 SHANK2Q9UPX8 1470 aa16.23■□□□□ 0.19
LINC02561-201ENST00000449457 KIAA1107Q9UPP5 1409 aa16.23■□□□□ 0.19
LINC02561-201ENST00000449457 TNRQ92752 1358 aa16.23■□□□□ 0.19
LINC02561-201ENST00000449457 ZNF219Q9P2Y4 722 aaPredicted RBP16.22■□□□□ 0.19
LINC02561-201ENST00000449457 MBD5Q9P267 1494 aa16.22■□□□□ 0.19
LINC02561-201ENST00000449457 MTUS2Q5JR59 1369 aa16.21■□□□□ 0.19
LINC02561-201ENST00000449457 PLEKHH2Q8IVE3 1493 aa16.21■□□□□ 0.19
LINC02561-201ENST00000449457 CPS1P31327 1500 aa16.2■□□□□ 0.18
LINC02561-201ENST00000449457 KDM5DQ9BY66 1539 aa16.19■□□□□ 0.18
LINC02561-201ENST00000449457 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
LINC02561-201ENST00000449457 PZPP20742 1482 aa16.18■□□□□ 0.18
LINC02561-201ENST00000449457 KIF3BO15066 747 aa16.18■□□□□ 0.18
LINC02561-201ENST00000449457 IQGAP1P46940 1657 aa16.16■□□□□ 0.18
LINC02561-201ENST00000449457 TOM1O60784 492 aa16.16■□□□□ 0.18
LINC02561-201ENST00000449457 NPHP4O75161 1426 aaPredicted RBP16.16■□□□□ 0.18
LINC02561-201ENST00000449457 DHX29Q7Z478 1369 aaKnown RBP16.15■□□□□ 0.18
LINC02561-201ENST00000449457 EHBP1L1Q8N3D4 1523 aa16.15■□□□□ 0.18
LINC02561-201ENST00000449457 UGGT1Q9NYU2 1555 aa16.15■□□□□ 0.18
LINC02561-201ENST00000449457 CAMSAP2Q08AD1 1489 aa16.15■□□□□ 0.18
LINC02561-201ENST00000449457 CCDC141Q6ZP82 1450 aa16.12■□□□□ 0.17
LINC02561-201ENST00000449457 FKBP8Q14318 412 aa16.12■□□□□ 0.17
LINC02561-201ENST00000449457 LRRC7Q96NW7 1537 aa16.12■□□□□ 0.17
LINC02561-201ENST00000449457 RNF17Q9BXT8 1623 aaKnown RBP16.12■□□□□ 0.17
LINC02561-201ENST00000449457 DEPDC5O75140 1603 aa16.1■□□□□ 0.17
LINC02561-201ENST00000449457 ANKLE2Q86XL3 938 aa16.1■□□□□ 0.17
LINC02561-201ENST00000449457 WASHC2CQ9Y4E1 1318 aa16.1■□□□□ 0.17
LINC02561-201ENST00000449457 CEP152O94986 1710 aa16.1■□□□□ 0.17
LINC02561-201ENST00000449457 MIA2Q96PC5 1412 aa16.1■□□□□ 0.17
LINC02561-201ENST00000449457 FAM135AQ9P2D6 1515 aa16.09■□□□□ 0.17
LINC02561-201ENST00000449457 CFAP65Q6ZU64 1925 aaKnown RBP16.09■□□□□ 0.17
LINC02561-201ENST00000449457 RTEL1-TNFRSF6BF6WH68 1400 aa16.09■□□□□ 0.17
LINC02561-201ENST00000449457 ZC3H13Q5T200 1668 aaKnown RBP16.08■□□□□ 0.17
LINC02561-201ENST00000449457 NCOA2Q15596 1464 aa16.08■□□□□ 0.16
LINC02561-201ENST00000449457 ABCC3O15438 1527 aa16.08■□□□□ 0.16
LINC02561-201ENST00000449457 CAPN15O75808 1086 aa16.07■□□□□ 0.16
LINC02561-201ENST00000449457 RGS17Q9UGC6 210 aaPredicted RBP16.07■□□□□ 0.16
LINC02561-201ENST00000449457 CEP162Q5TB80 1403 aa16.07■□□□□ 0.16
LINC02561-201ENST00000449457 MED14O60244 1454 aa16.07■□□□□ 0.16
LINC02561-201ENST00000449457 NLRP1Q9C000 1473 aa16.07■□□□□ 0.16
LINC02561-201ENST00000449457 XIRP1Q702N8 1843 aaKnown RBP16.07■□□□□ 0.16
LINC02561-201ENST00000449457 SETD1AO15047 1707 aaKnown RBP16.06■□□□□ 0.16
LINC02561-201ENST00000449457 SYNMO15061 1565 aa16.06■□□□□ 0.16
LINC02561-201ENST00000449457 MROH1Q8NDA8 1641 aa16.05■□□□□ 0.16
LINC02561-201ENST00000449457 ERVK-7P63135 1459 aa16.05■□□□□ 0.16
LINC02561-201ENST00000449457 UBR1Q8IWV7 1749 aa16.04■□□□□ 0.16
LINC02561-201ENST00000449457 THEMISQ8N1K5 641 aaPredicted RBP16.03■□□□□ 0.16
LINC02561-201ENST00000449457 POTEHQ6S545 545 aa16.02■□□□□ 0.16
LINC02561-201ENST00000449457 RBM33Q96EV2 1170 aaKnown RBP16.01■□□□□ 0.15
LINC02561-201ENST00000449457 ARHGEF5Q12774 1597 aa16■□□□□ 0.15
LINC02561-201ENST00000449457 SCAF11Q99590 1463 aaKnown RBP15.99■□□□□ 0.15
LINC02561-201ENST00000449457 LTKP29376 864 aa15.99■□□□□ 0.15
LINC02561-201ENST00000449457 POTEAQ6S8J7 498 aa15.97■□□□□ 0.15
LINC02561-201ENST00000449457 PIK3C2BO00750 1634 aa15.95■□□□□ 0.14
LINC02561-201ENST00000449457 POLA2Q14181 598 aa15.94■□□□□ 0.14
LINC02561-201ENST00000449457 ROBO1Q9Y6N7 1651 aa15.94■□□□□ 0.14
LINC02561-201ENST00000449457 MAST1Q9Y2H9 1570 aa15.93■□□□□ 0.14
LINC02561-201ENST00000449457 EIF2AK4Q9P2K8 1649 aaKnown RBP15.93■□□□□ 0.14
LINC02561-201ENST00000449457 TXNDC2Q86VQ3 553 aa15.92■□□□□ 0.14
LINC02561-201ENST00000449457 MAP3K1Q13233 1512 aa15.92■□□□□ 0.14
LINC02561-201ENST00000449457 ARHGAP23Q9P227 1491 aa15.91■□□□□ 0.14
LINC02561-201ENST00000449457 TSPY4P0CV99 314 aa15.91■□□□□ 0.14
LINC02561-201ENST00000449457 TSPY10P0CW01 314 aa15.91■□□□□ 0.14
LINC02561-201ENST00000449457 SLIT1O75093 1534 aa15.9■□□□□ 0.14
LINC02561-201ENST00000449457 TMEM94Q12767 1356 aa15.89■□□□□ 0.13
LINC02561-201ENST00000449457 KANK4Q5T7N3 995 aaPredicted RBP15.88■□□□□ 0.13
LINC02561-201ENST00000449457 LRRC9Q6ZRR7 1453 aa15.88■□□□□ 0.13
LINC02561-201ENST00000449457 PRDM15P57071 1507 aaPredicted RBP15.88■□□□□ 0.13
LINC02561-201ENST00000449457 MKRN4PQ13434 485 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms