RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 RSPH4AQ5TD94 716 aa18.24■□□□□ 0.51
SYNGAP1-204ENST00000449372 KIF15Q9NS87 1388 aa18.24■□□□□ 0.51
SYNGAP1-204ENST00000449372 L3MBTL2Q969R5 705 aa18.23■□□□□ 0.51
SYNGAP1-204ENST00000449372 PLEKHH2Q8IVE3 1493 aa18.23■□□□□ 0.51
SYNGAP1-204ENST00000449372 ABCC1P33527 1531 aa18.23■□□□□ 0.51
SYNGAP1-204ENST00000449372 B4GALNT3Q6L9W6 998 aa18.22■□□□□ 0.51
SYNGAP1-204ENST00000449372 WASHC2AQ641Q2 1341 aa18.21■□□□□ 0.51
SYNGAP1-204ENST00000449372 C11orf95C9JLR9 678 aaPredicted RBP18.21■□□□□ 0.51
SYNGAP1-204ENST00000449372 HNRNPUQ00839 825 aaKnown RBP eCLIP18.19■□□□□ 0.5
SYNGAP1-204ENST00000449372 TSPY4P0CV99 314 aa18.19■□□□□ 0.5
SYNGAP1-204ENST00000449372 TSPY10P0CW01 314 aa18.19■□□□□ 0.5
SYNGAP1-204ENST00000449372 HIRIP3Q9BW71 556 aaPredicted RBP18.18■□□□□ 0.5
SYNGAP1-204ENST00000449372 ABCA9Q8IUA7 1624 aa18.18■□□□□ 0.5
SYNGAP1-204ENST00000449372 MAGI2Q86UL8 1455 aa18.18■□□□□ 0.5
SYNGAP1-204ENST00000449372 POLR1AO95602 1720 aaPredicted RBP18.18■□□□□ 0.5
SYNGAP1-204ENST00000449372 FAM135AQ9P2D6 1515 aa18.17■□□□□ 0.5
SYNGAP1-204ENST00000449372 SPATA31E1Q6ZUB1 1445 aa18.17■□□□□ 0.5
SYNGAP1-204ENST00000449372 IQGAP3Q86VI3 1631 aa18.16■□□□□ 0.5
SYNGAP1-204ENST00000449372 NBPF8Q3BBV2 869 aa18.16■□□□□ 0.5
SYNGAP1-204ENST00000449372 WDR7Q9Y4E6 1490 aa18.16■□□□□ 0.5
SYNGAP1-204ENST00000449372 NUP155O75694 1391 aa18.15■□□□□ 0.5
SYNGAP1-204ENST00000449372 PKD2Q13563 968 aa18.14■□□□□ 0.49
SYNGAP1-204ENST00000449372 BRPF3Q9ULD4 1205 aa18.14■□□□□ 0.49
SYNGAP1-204ENST00000449372 DUOX2Q9NRD8 1548 aa18.13■□□□□ 0.49
SYNGAP1-204ENST00000449372 WASHC2CQ9Y4E1 1318 aa18.13■□□□□ 0.49
SYNGAP1-204ENST00000449372 NEFMP07197 916 aa18.13■□□□□ 0.49
SYNGAP1-204ENST00000449372 UHRF1BP1Q6BDS2 1440 aa18.12■□□□□ 0.49
SYNGAP1-204ENST00000449372 USP35Q9P2H5 1018 aa18.11■□□□□ 0.49
SYNGAP1-204ENST00000449372 HSPA5P11021 654 aaKnown RBP18.11■□□□□ 0.49
SYNGAP1-204ENST00000449372 TRAPPC8Q9Y2L5 1435 aa18.1■□□□□ 0.49
SYNGAP1-204ENST00000449372 GLIPR1L2Q4G1C9 344 aa18.1■□□□□ 0.49
SYNGAP1-204ENST00000449372 ERBINQ96RT1 1412 aa18.1■□□□□ 0.49
SYNGAP1-204ENST00000449372 RSPH6AQ9H0K4 717 aa18.1■□□□□ 0.49
SYNGAP1-204ENST00000449372 ZFYVE16Q7Z3T8 1539 aa18.09■□□□□ 0.49
SYNGAP1-204ENST00000449372 INO80Q9ULG1 1556 aaPredicted RBP18.08■□□□□ 0.48
SYNGAP1-204ENST00000449372 PLA2R1Q13018 1463 aa18.07■□□□□ 0.48
SYNGAP1-204ENST00000449372 EIF4G2P78344 907 aaKnown RBP eCLIP18.07■□□□□ 0.481e-7■■■■■ 32.2
SYNGAP1-204ENST00000449372 RTEL1-TNFRSF6BF6WH68 1400 aa18.07■□□□□ 0.48
SYNGAP1-204ENST00000449372 DEPDC5O75140 1603 aa18.07■□□□□ 0.48
SYNGAP1-204ENST00000449372 EFCAB2Q5VUJ9 269 aa18.06■□□□□ 0.48
SYNGAP1-204ENST00000449372 KDM5CP41229 1560 aa18.06■□□□□ 0.48
SYNGAP1-204ENST00000449372 ATP10AO60312 1499 aa18.05■□□□□ 0.48
SYNGAP1-204ENST00000449372 LAS1LQ9Y4W2 734 aaKnown RBP18.05■□□□□ 0.48
SYNGAP1-204ENST00000449372 ASXL2Q76L83 1435 aa18.04■□□□□ 0.48
SYNGAP1-204ENST00000449372 BCORL1Q5H9F3 1711 aa18.03■□□□□ 0.48
SYNGAP1-204ENST00000449372 ZMYND15Q9H091 742 aa18.03■□□□□ 0.48
SYNGAP1-204ENST00000449372 RALGAPBQ86X10 1494 aa18.02■□□□□ 0.48
SYNGAP1-204ENST00000449372 FANCAO15360 1455 aa18.01■□□□□ 0.47
SYNGAP1-204ENST00000449372 OSCARQ8IYS5 282 aa18.01■□□□□ 0.47
SYNGAP1-204ENST00000449372 VSIG10Q8N0Z9 540 aa18■□□□□ 0.47
SYNGAP1-204ENST00000449372 VWDEQ8N2E2 1590 aa17.99■□□□□ 0.47
SYNGAP1-204ENST00000449372 CCDC7Q96M83 1385 aa17.99■□□□□ 0.47
SYNGAP1-204ENST00000449372 E9PCH4 1651 aa17.98■□□□□ 0.47
SYNGAP1-204ENST00000449372 ATP7AQ04656 1500 aa17.98■□□□□ 0.47
SYNGAP1-204ENST00000449372 TRPM1Q7Z4N2 1603 aa17.98■□□□□ 0.47
SYNGAP1-204ENST00000449372 CNTLNQ9NXG0 1405 aa17.97■□□□□ 0.47
SYNGAP1-204ENST00000449372 GSE1Q14687 1217 aa17.97■□□□□ 0.47
SYNGAP1-204ENST00000449372 EIF2AK4Q9P2K8 1649 aaKnown RBP17.97■□□□□ 0.47
SYNGAP1-204ENST00000449372 MROH1Q8NDA8 1641 aa17.96■□□□□ 0.46
SYNGAP1-204ENST00000449372 PPM1GO15355 546 aaPredicted RBP17.95■□□□□ 0.46
SYNGAP1-204ENST00000449372 KIDINS220Q9ULH0 1771 aa17.95■□□□□ 0.46
SYNGAP1-204ENST00000449372 NPM2Q86SE8 214 aaKnown RBP17.94■□□□□ 0.46
SYNGAP1-204ENST00000449372 AFAP1Q8N556 730 aa17.93■□□□□ 0.46
SYNGAP1-204ENST00000449372 ADGRL1O94910 1474 aa17.93■□□□□ 0.46
SYNGAP1-204ENST00000449372 LAMC1P11047 1609 aa17.93■□□□□ 0.46
SYNGAP1-204ENST00000449372 A2MP01023 1474 aa17.92■□□□□ 0.46
SYNGAP1-204ENST00000449372 TET3O43151 1660 aa17.91■□□□□ 0.46
SYNGAP1-204ENST00000449372 KIF7Q2M1P5 1343 aa17.91■□□□□ 0.46
SYNGAP1-204ENST00000449372 CCDC144AA2RUR9 1427 aa17.91■□□□□ 0.46
SYNGAP1-204ENST00000449372 PRDM15P57071 1507 aaPredicted RBP17.91■□□□□ 0.46
SYNGAP1-204ENST00000449372 SPAG9O60271 1321 aaKnown RBP17.91■□□□□ 0.46
SYNGAP1-204ENST00000449372 USP47Q96K76 1375 aa17.91■□□□□ 0.46
SYNGAP1-204ENST00000449372 PRAG1Q86YV5 1406 aa17.91■□□□□ 0.46
SYNGAP1-204ENST00000449372 CFAP74Q9C0B2 1584 aa17.91■□□□□ 0.46
SYNGAP1-204ENST00000449372 SPHKAPQ2M3C7 1700 aa17.9■□□□□ 0.46
SYNGAP1-204ENST00000449372 CEP152O94986 1710 aa17.89■□□□□ 0.45
SYNGAP1-204ENST00000449372 TRPM2O94759 1503 aa17.89■□□□□ 0.45
SYNGAP1-204ENST00000449372 SCAPERQ9BY12 1400 aa17.89■□□□□ 0.45
SYNGAP1-204ENST00000449372 PTPRTO14522 1441 aa17.89■□□□□ 0.45
SYNGAP1-204ENST00000449372 FAM43AQ8N2R8 423 aa17.89■□□□□ 0.45
SYNGAP1-204ENST00000449372 MRS2Q9HD23 443 aa17.89■□□□□ 0.45
SYNGAP1-204ENST00000449372 RNF17Q9BXT8 1623 aaKnown RBP17.86■□□□□ 0.45
SYNGAP1-204ENST00000449372 GPRASP1Q5JY77 1395 aa17.86■□□□□ 0.45
SYNGAP1-204ENST00000449372 NEURL4Q96JN8 1562 aa17.85■□□□□ 0.45
SYNGAP1-204ENST00000449372 ZBED9Q6R2W3 1325 aa17.85■□□□□ 0.45
SYNGAP1-204ENST00000449372 CLTCL1P53675 1640 aa17.84■□□□□ 0.45
SYNGAP1-204ENST00000449372 DHX29Q7Z478 1369 aaKnown RBP17.84■□□□□ 0.45
SYNGAP1-204ENST00000449372 ARID4BQ4LE39 1312 aaPredicted RBP17.84■□□□□ 0.45
SYNGAP1-204ENST00000449372 ZNF518AQ6AHZ1 1483 aa17.84■□□□□ 0.45
SYNGAP1-204ENST00000449372 FRAT1Q92837 279 aaPredicted RBP17.84■□□□□ 0.45
SYNGAP1-204ENST00000449372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.83■□□□□ 0.451e-6■■■■□ 21.3
SYNGAP1-204ENST00000449372 FRMPD1Q5SYB0 1578 aa17.83■□□□□ 0.45
SYNGAP1-204ENST00000449372 DCAF11Q8TEB1 546 aa17.83■□□□□ 0.44
SYNGAP1-204ENST00000449372 POGZQ7Z3K3 1410 aa17.81■□□□□ 0.44
SYNGAP1-204ENST00000449372 LMTK2Q8IWU2 1503 aa17.81■□□□□ 0.44
SYNGAP1-204ENST00000449372 MAP3K4Q9Y6R4 1608 aa17.81■□□□□ 0.44
SYNGAP1-204ENST00000449372 CD109Q6YHK3 1445 aa17.81■□□□□ 0.44
SYNGAP1-204ENST00000449372 MADDQ8WXG6 1647 aa17.81■□□□□ 0.44
SYNGAP1-204ENST00000449372 MLH3Q9UHC1 1453 aa17.81■□□□□ 0.44
SYNGAP1-204ENST00000449372 FAM9BQ8IZU0 186 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms