RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 ABCA6Q8N139 1617 aa11.52□□□□□ -0.56
LINC00954-202ENST00000449086 ATP10AO60312 1499 aa11.52□□□□□ -0.57
LINC00954-202ENST00000449086 NEFLP07196 543 aa11.51□□□□□ -0.57
LINC00954-202ENST00000449086 PLPPR3Q6T4P5 718 aa11.51□□□□□ -0.57
LINC00954-202ENST00000449086 AGLP35573 1532 aa11.51□□□□□ -0.57
LINC00954-202ENST00000449086 BCORL1Q5H9F3 1711 aa11.51□□□□□ -0.57
LINC00954-202ENST00000449086 ANKRD30AQ9BXX3 1397 aa11.5□□□□□ -0.57
LINC00954-202ENST00000449086 RBM19Q9Y4C8 960 aaKnown RBP11.5□□□□□ -0.57
LINC00954-202ENST00000449086 DUOX2Q9NRD8 1548 aa11.5□□□□□ -0.57
LINC00954-202ENST00000449086 EIF2AK4Q9P2K8 1649 aaKnown RBP11.49□□□□□ -0.57
LINC00954-202ENST00000449086 YEATS2Q9ULM3 1422 aa11.49□□□□□ -0.57
LINC00954-202ENST00000449086 DHX57Q6P158 1386 aaKnown RBP11.49□□□□□ -0.57
LINC00954-202ENST00000449086 NCOA1Q15788 1441 aa11.49□□□□□ -0.57
LINC00954-202ENST00000449086 PTPRKQ15262 1439 aa11.48□□□□□ -0.57
LINC00954-202ENST00000449086 A2MP01023 1474 aa11.48□□□□□ -0.57
LINC00954-202ENST00000449086 ERBINQ96RT1 1412 aa11.48□□□□□ -0.57
LINC00954-202ENST00000449086 DHX29Q7Z478 1369 aaKnown RBP11.47□□□□□ -0.57
LINC00954-202ENST00000449086 GCC2Q8IWJ2 1684 aa11.46□□□□□ -0.57
LINC00954-202ENST00000449086 FAM135AQ9P2D6 1515 aa11.46□□□□□ -0.57
LINC00954-202ENST00000449086 ADRA2BP18089 450 aa11.46□□□□□ -0.57
LINC00954-202ENST00000449086 PPP6R1Q9UPN7 881 aa11.46□□□□□ -0.57
LINC00954-202ENST00000449086 KIF15Q9NS87 1388 aa11.46□□□□□ -0.58
LINC00954-202ENST00000449086 ERICH6Q7L0X2 663 aa11.45□□□□□ -0.58
LINC00954-202ENST00000449086 TRIM52Q96A61 297 aa11.45□□□□□ -0.58
LINC00954-202ENST00000449086 HFM1A2PYH4 1435 aa11.45□□□□□ -0.58
LINC00954-202ENST00000449086 MYT1LQ9UL68 1186 aa11.44□□□□□ -0.58
LINC00954-202ENST00000449086 RNF17Q9BXT8 1623 aaKnown RBP11.44□□□□□ -0.58
LINC00954-202ENST00000449086 DDX10Q13206 875 aaKnown RBP11.43□□□□□ -0.58
LINC00954-202ENST00000449086 DEPDC5O75140 1603 aa11.42□□□□□ -0.58
LINC00954-202ENST00000449086 SIGLEC1Q9BZZ2 1709 aa11.41□□□□□ -0.58
LINC00954-202ENST00000449086 NAIPQ13075 1403 aa11.41□□□□□ -0.58
LINC00954-202ENST00000449086 ANKRD50Q9ULJ7 1429 aa11.41□□□□□ -0.58
LINC00954-202ENST00000449086 UNC13BO14795 1591 aa11.4□□□□□ -0.58
LINC00954-202ENST00000449086 CHIC2Q9UKJ5 165 aa11.4□□□□□ -0.59
LINC00954-202ENST00000449086 PRDM15P57071 1507 aaPredicted RBP11.39□□□□□ -0.59
LINC00954-202ENST00000449086 ZC3H13Q5T200 1668 aaKnown RBP11.39□□□□□ -0.59
LINC00954-202ENST00000449086 KDM5DQ9BY66 1539 aa11.39□□□□□ -0.59
LINC00954-202ENST00000449086 HIRIP3Q9BW71 556 aaPredicted RBP11.39□□□□□ -0.59
LINC00954-202ENST00000449086 RRP7BPQ9NSQ0 103 aa11.39□□□□□ -0.59
LINC00954-202ENST00000449086 ADAMTSL3P82987 1691 aa11.38□□□□□ -0.59
LINC00954-202ENST00000449086 MROH1Q8NDA8 1641 aa11.37□□□□□ -0.59
LINC00954-202ENST00000449086 VWDEQ8N2E2 1590 aa11.37□□□□□ -0.59
LINC00954-202ENST00000449086 CNTLNQ9NXG0 1405 aa11.37□□□□□ -0.59
LINC00954-202ENST00000449086 MROH2AA6NES4 1674 aa11.36□□□□□ -0.59
LINC00954-202ENST00000449086 SETD5Q9C0A6 1442 aa11.36□□□□□ -0.59
LINC00954-202ENST00000449086 LMTK2Q8IWU2 1503 aa11.36□□□□□ -0.59
LINC00954-202ENST00000449086 RAB3GAP2Q9H2M9 1393 aa11.35□□□□□ -0.59
LINC00954-202ENST00000449086 IRX6P78412 446 aaPredicted RBP11.35□□□□□ -0.59
LINC00954-202ENST00000449086 IQGAP3Q86VI3 1631 aa11.34□□□□□ -0.59
LINC00954-202ENST00000449086 KIF3BO15066 747 aa11.34□□□□□ -0.59
LINC00954-202ENST00000449086 FER1L4A9Z1Z3 1794 aa11.34□□□□□ -0.59
LINC00954-202ENST00000449086 ARID4BQ4LE39 1312 aaPredicted RBP11.34□□□□□ -0.59
LINC00954-202ENST00000449086 KANK1Q14678 1352 aa11.33□□□□□ -0.6
LINC00954-202ENST00000449086 ABCC3O15438 1527 aa11.32□□□□□ -0.6
LINC00954-202ENST00000449086 MADDQ8WXG6 1647 aa11.31□□□□□ -0.6
LINC00954-202ENST00000449086 TET3O43151 1660 aa11.31□□□□□ -0.6
LINC00954-202ENST00000449086 ARHGAP31Q2M1Z3 1444 aa11.3□□□□□ -0.6
LINC00954-202ENST00000449086 SIN3AQ96ST3 1273 aa11.3□□□□□ -0.6
LINC00954-202ENST00000449086 CAMSAP1Q5T5Y3 1602 aa11.3□□□□□ -0.6
LINC00954-202ENST00000449086 CLTCQ00610 1675 aaKnown RBP11.29□□□□□ -0.6
LINC00954-202ENST00000449086 RPRD2Q5VT52 1461 aaKnown RBP11.29□□□□□ -0.6
LINC00954-202ENST00000449086 EFCAB6Q5THR3 1501 aa11.29□□□□□ -0.6
LINC00954-202ENST00000449086 ANP32CO43423 234 aa11.28□□□□□ -0.6
LINC00954-202ENST00000449086 GGT6Q6P531 493 aa11.28□□□□□ -0.6
LINC00954-202ENST00000449086 CEP152O94986 1710 aa11.28□□□□□ -0.6
LINC00954-202ENST00000449086 RIMS1Q86UR5 1692 aaKnown RBP11.28□□□□□ -0.6
LINC00954-202ENST00000449086 ESF1Q9H501 851 aaKnown RBP11.27□□□□□ -0.61
LINC00954-202ENST00000449086 PZPP20742 1482 aa11.27□□□□□ -0.61
LINC00954-202ENST00000449086 WASHC2CQ9Y4E1 1318 aa11.27□□□□□ -0.61
LINC00954-202ENST00000449086 NUP155O75694 1391 aa11.27□□□□□ -0.61
LINC00954-202ENST00000449086 NPATQ14207 1427 aa11.26□□□□□ -0.61
LINC00954-202ENST00000449086 C3P01024 1663 aa11.26□□□□□ -0.61
LINC00954-202ENST00000449086 PTPRMP28827 1452 aa11.25□□□□□ -0.61
LINC00954-202ENST00000449086 MLECQ14165 292 aa11.25□□□□□ -0.61
LINC00954-202ENST00000449086 ZMYM3Q14202 1370 aa11.25□□□□□ -0.61
LINC00954-202ENST00000449086 SPATA31D1Q6ZQQ2 1576 aa11.24□□□□□ -0.61
LINC00954-202ENST00000449086 KDM4FA0A1W2PPD8 638 aa11.24□□□□□ -0.61
LINC00954-202ENST00000449086 PRKCSHP14314 528 aaPredicted RBP11.23□□□□□ -0.61
LINC00954-202ENST00000449086 E9PCH4 1651 aa11.23□□□□□ -0.61
LINC00954-202ENST00000449086 HNRNPUQ00839 825 aaKnown RBP eCLIP11.23□□□□□ -0.61
LINC00954-202ENST00000449086 NBR1Q14596 966 aa11.22□□□□□ -0.61
LINC00954-202ENST00000449086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.22□□□□□ -0.61
LINC00954-202ENST00000449086 DEKP35659 375 aaKnown RBP11.22□□□□□ -0.61
LINC00954-202ENST00000449086 PREX1Q8TCU6 1659 aa11.22□□□□□ -0.61
LINC00954-202ENST00000449086 ERVK-7P63135 1459 aa11.21□□□□□ -0.61
LINC00954-202ENST00000449086 NOS1P29475 1434 aa11.21□□□□□ -0.62
LINC00954-202ENST00000449086 PTPRTO14522 1441 aa11.2□□□□□ -0.62
LINC00954-202ENST00000449086 SPHKAPQ2M3C7 1700 aa11.19□□□□□ -0.62
LINC00954-202ENST00000449086 TRPM2O94759 1503 aa11.19□□□□□ -0.62
LINC00954-202ENST00000449086 KDM5AP29375 1690 aaKnown RBP11.19□□□□□ -0.62
LINC00954-202ENST00000449086 MPHOSPH9Q99550 1183 aa11.19□□□□□ -0.62
LINC00954-202ENST00000449086 SLC4A1APQ9BWU0 796 aaKnown RBP11.19□□□□□ -0.62
LINC00954-202ENST00000449086 FANCIQ9NVI1 1328 aa11.18□□□□□ -0.62
LINC00954-202ENST00000449086 NLRP1Q9C000 1473 aa11.18□□□□□ -0.62
LINC00954-202ENST00000449086 PPP1R15AO75807 674 aaPredicted RBP11.18□□□□□ -0.62
LINC00954-202ENST00000449086 ZNF142P52746 1687 aaPredicted RBP11.18□□□□□ -0.62
LINC00954-202ENST00000449086 PIK3C2BO00750 1634 aa11.17□□□□□ -0.62
LINC00954-202ENST00000449086 TNRQ92752 1358 aa11.17□□□□□ -0.62
LINC00954-202ENST00000449086 SYNMO15061 1565 aa11.16□□□□□ -0.62
LINC00954-202ENST00000449086 MYO3AQ8NEV4 1616 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms