RNA–Protein interactions for RNA: ENST00000448828.5

NME4-206, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 2

Gene NME4, Length 1,167 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-206ENST00000448828 DMRT2Q9Y5R5 561 aa35.31■■■■□ 3.24
NME4-206ENST00000448828 SHANK2Q9UPX8 1470 aa35.29■■■■□ 3.24
NME4-206ENST00000448828 EIF2AK4Q9P2K8 1649 aaKnown RBP35.29■■■■□ 3.24
NME4-206ENST00000448828 ABCC5O15440 1437 aa35.29■■■■□ 3.24
NME4-206ENST00000448828 CAMSAP1Q5T5Y3 1602 aa35.28■■■■□ 3.24
NME4-206ENST00000448828 ZNF142P52746 1687 aaPredicted RBP35.28■■■■□ 3.24
NME4-206ENST00000448828 DAPK1P53355 1430 aa35.28■■■■□ 3.24
NME4-206ENST00000448828 CEP170BQ9Y4F5 1589 aaPredicted RBP35.28■■■■□ 3.24
NME4-206ENST00000448828 TCOF1Q13428 1488 aaKnown RBP35.28■■■■□ 3.24
NME4-206ENST00000448828 DNMT1P26358 1616 aaKnown RBP35.28■■■■□ 3.24
NME4-206ENST00000448828 RNF17Q9BXT8 1623 aaKnown RBP35.28■■■■□ 3.24
NME4-206ENST00000448828 DUOX2Q9NRD8 1548 aa35.27■■■■□ 3.24
NME4-206ENST00000448828 NCOA1Q15788 1441 aa35.25■■■■□ 3.23
NME4-206ENST00000448828 KIF15Q9NS87 1388 aa35.25■■■■□ 3.23
NME4-206ENST00000448828 FBXO41Q8TF61 875 aa35.24■■■■□ 3.23
NME4-206ENST00000448828 PZPP20742 1482 aa35.23■■■■□ 3.23
NME4-206ENST00000448828 RRP7BPQ9NSQ0 103 aa35.21■■■■□ 3.23
NME4-206ENST00000448828 FBXO31Q5XUX0 539 aaPredicted RBP35.2■■■■□ 3.23
NME4-206ENST00000448828 ZC3H13Q5T200 1668 aaKnown RBP35.2■■■■□ 3.23
NME4-206ENST00000448828 TNRQ92752 1358 aa35.19■■■■□ 3.22
NME4-206ENST00000448828 FAM50AQ14320 339 aaKnown RBP35.18■■■■□ 3.22
NME4-206ENST00000448828 ABCC3O15438 1527 aa35.17■■■■□ 3.22
NME4-206ENST00000448828 PTPRTO14522 1441 aa35.17■■■■□ 3.22
NME4-206ENST00000448828 CHIC2Q9UKJ5 165 aa35.17■■■■□ 3.22
NME4-206ENST00000448828 A2ML1A8K2U0 1454 aa35.16■■■■□ 3.22
NME4-206ENST00000448828 MROH1Q8NDA8 1641 aa35.15■■■■□ 3.22
NME4-206ENST00000448828 ERBINQ96RT1 1412 aa35.15■■■■□ 3.22
NME4-206ENST00000448828 CERKQ8TCT0 537 aa35.14■■■■□ 3.22
NME4-206ENST00000448828 CEP152O94986 1710 aa35.13■■■■□ 3.21
NME4-206ENST00000448828 NCKAP5LQ9HCH0 1330 aa35.12■■■■□ 3.21
NME4-206ENST00000448828 ANKRD30AQ9BXX3 1397 aa35.12■■■■□ 3.21
NME4-206ENST00000448828 PLA2R1Q13018 1463 aa35.1■■■■□ 3.21
NME4-206ENST00000448828 PRDM15P57071 1507 aaPredicted RBP35.06■■■■□ 3.2
NME4-206ENST00000448828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.06■■■■□ 3.2
NME4-206ENST00000448828 PKD2Q13563 968 aa35.04■■■■□ 3.2
NME4-206ENST00000448828 NLRP1Q9C000 1473 aa35.02■■■■□ 3.2
NME4-206ENST00000448828 PPARGC1BQ86YN6 1023 aaKnown RBP35.01■■■■□ 3.2
NME4-206ENST00000448828 SPATA31D1Q6ZQQ2 1576 aa35■■■■□ 3.19
NME4-206ENST00000448828 ERVK-7P63135 1459 aa34.99■■■■□ 3.19
NME4-206ENST00000448828 DEPDC5O75140 1603 aa34.99■■■■□ 3.19
NME4-206ENST00000448828 KANK1Q14678 1352 aa34.99■■■■□ 3.19
NME4-206ENST00000448828 UGGT1Q9NYU2 1555 aa34.98■■■■□ 3.19
NME4-206ENST00000448828 ADGRL2O95490 1459 aa34.97■■■■□ 3.19
NME4-206ENST00000448828 POLR1AO95602 1720 aaPredicted RBP34.96■■■■□ 3.19
NME4-206ENST00000448828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.93■■■■□ 3.182e-10■■■■■ 37.2
NME4-206ENST00000448828 CFAP65Q6ZU64 1925 aaKnown RBP34.93■■■■□ 3.18
NME4-206ENST00000448828 THEMISQ8N1K5 641 aaPredicted RBP34.91■■■■□ 3.18
NME4-206ENST00000448828 LTBP4Q8N2S1 1624 aa34.91■■■■□ 3.18
NME4-206ENST00000448828 ZNF335Q9H4Z2 1342 aaPredicted RBP34.88■■■■□ 3.17
NME4-206ENST00000448828 ARHGAP31Q2M1Z3 1444 aa34.86■■■■□ 3.17
NME4-206ENST00000448828 ANKLE2Q86XL3 938 aa34.85■■■■□ 3.17
NME4-206ENST00000448828 NEURL4Q96JN8 1562 aa34.85■■■■□ 3.17
NME4-206ENST00000448828 ANKRD50Q9ULJ7 1429 aa34.85■■■■□ 3.17
NME4-206ENST00000448828 ITGAEP38570 1179 aa34.83■■■■□ 3.17
NME4-206ENST00000448828 VWDEQ8N2E2 1590 aa34.8■■■■□ 3.16
NME4-206ENST00000448828 LMTK2Q8IWU2 1503 aa34.8■■■■□ 3.16
NME4-206ENST00000448828 UBR1Q8IWV7 1749 aa34.78■■■■□ 3.16
NME4-206ENST00000448828 EFCAB6Q5THR3 1501 aa34.76■■■■□ 3.15
NME4-206ENST00000448828 NPHP4O75161 1426 aaPredicted RBP34.74■■■■□ 3.15
NME4-206ENST00000448828 IQSEC2Q5JU85 1478 aa34.74■■■■□ 3.15
NME4-206ENST00000448828 ROCK1Q13464 1354 aa34.72■■■■□ 3.15
NME4-206ENST00000448828 PIK3C2BO00750 1634 aa34.71■■■■□ 3.15
NME4-206ENST00000448828 IQGAP1P46940 1657 aa34.71■■■■□ 3.15
NME4-206ENST00000448828 STAG3Q9UJ98 1225 aa34.7■■■■□ 3.15
NME4-206ENST00000448828 MED14O60244 1454 aa34.68■■■■□ 3.14
NME4-206ENST00000448828 UNC13BO14795 1591 aa34.66■■■■□ 3.14
NME4-206ENST00000448828 SYNMO15061 1565 aa34.65■■■■□ 3.14
NME4-206ENST00000448828 SCAF11Q99590 1463 aaKnown RBP34.64■■■■□ 3.14
NME4-206ENST00000448828 TET3O43151 1660 aa34.63■■■■□ 3.13
NME4-206ENST00000448828 CPS1P31327 1500 aa34.6■■■■□ 3.13
NME4-206ENST00000448828 NOS1P29475 1434 aa34.6■■■■□ 3.13
NME4-206ENST00000448828 SLIT1O75093 1534 aa34.6■■■■□ 3.13
NME4-206ENST00000448828 GCC2Q8IWJ2 1684 aa34.6■■■■□ 3.13
NME4-206ENST00000448828 RPRD2Q5VT52 1461 aaKnown RBP34.59■■■■□ 3.13
NME4-206ENST00000448828 IDI1Q13907 227 aa34.58■■■■□ 3.13
NME4-206ENST00000448828 TXNDC2Q86VQ3 553 aa34.58■■■■□ 3.13
NME4-206ENST00000448828 EID1Q9Y6B2 187 aa34.58■■■■□ 3.13
NME4-206ENST00000448828 ARHGAP23Q9P227 1491 aa34.58■■■■□ 3.13
NME4-206ENST00000448828 UBAP1LF5GYI3 381 aa34.57■■■■□ 3.12
NME4-206ENST00000448828 RRBP1Q9P2E9 1410 aaKnown RBP34.55■■■■□ 3.12
NME4-206ENST00000448828 ADGRB3O60242 1522 aa34.55■■■■□ 3.12
NME4-206ENST00000448828 KDM5AP29375 1690 aaKnown RBP34.54■■■■□ 3.12
NME4-206ENST00000448828 TMEM2Q9UHN6 1383 aa34.54■■■■□ 3.12
NME4-206ENST00000448828 LTKP29376 864 aa34.54■■■■□ 3.12
NME4-206ENST00000448828 IQGAP3Q86VI3 1631 aa34.52■■■■□ 3.12
NME4-206ENST00000448828 NUP155O75694 1391 aa34.5■■■■□ 3.11
NME4-206ENST00000448828 SLC52A1Q9NWF4 448 aa34.5■■■■□ 3.11
NME4-206ENST00000448828 E9PCH4 1651 aa34.49■■■■□ 3.11
NME4-206ENST00000448828 SCAF1Q9H7N4 1312 aaKnown RBP34.44■■■■□ 3.1
NME4-206ENST00000448828 STRCP1A6NGW2 1772 aa34.43■■■■□ 3.1
NME4-206ENST00000448828 CHGAP10645 457 aaKnown RBP34.4■■■■□ 3.1
NME4-206ENST00000448828 MYO5BQ9ULV0 1848 aa34.38■■■■□ 3.09
NME4-206ENST00000448828 BCANQ96GW7 911 aa34.37■■■■□ 3.09
NME4-206ENST00000448828 PIP4K2BP78356 416 aa34.36■■■■□ 3.09
NME4-206ENST00000448828 TOM1O60784 492 aa34.35■■■■□ 3.09
NME4-206ENST00000448828 SENP3Q9H4L4 574 aaPredicted RBP34.35■■■■□ 3.09
NME4-206ENST00000448828 LRRC7Q96NW7 1537 aa34.35■■■■□ 3.09
NME4-206ENST00000448828 TMEM131LA2VDJ0 1609 aa34.33■■■■□ 3.09
NME4-206ENST00000448828 PPP1R15AO75807 674 aaPredicted RBP34.33■■■■□ 3.09
NME4-206ENST00000448828 NAIPQ13075 1403 aa34.32■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms