RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 ADAM33Q9BZ11 813 aa13.3□□□□□ -0.28
LINC00349-201ENST00000448748 BCL2L12Q9HB09 334 aa13.29□□□□□ -0.28
LINC00349-201ENST00000448748 LSM11P83369 360 aaKnown RBP eCLIP13.28□□□□□ -0.28
LINC00349-201ENST00000448748 TYW1BQ6NUM6 668 aa13.28□□□□□ -0.28
LINC00349-201ENST00000448748 KCNK17Q96T54 332 aa13.28□□□□□ -0.28
LINC00349-201ENST00000448748 ANKRD13DQ6ZTN6 518 aa13.26□□□□□ -0.29
LINC00349-201ENST00000448748 EPAS1Q99814 870 aa13.26□□□□□ -0.29
LINC00349-201ENST00000448748 GRXCR2A6NFK2 248 aa13.25□□□□□ -0.29
LINC00349-201ENST00000448748 NBR1Q14596 966 aa13.25□□□□□ -0.29
LINC00349-201ENST00000448748 DMRTA1Q5VZB9 504 aa13.25□□□□□ -0.29
LINC00349-201ENST00000448748 SPNS2Q8IVW8 549 aa13.25□□□□□ -0.29
LINC00349-201ENST00000448748 FBXW7Q969H0 707 aa13.25□□□□□ -0.29
LINC00349-201ENST00000448748 PTPREP23469 700 aa13.23□□□□□ -0.29
LINC00349-201ENST00000448748 PLSCR2Q9NRY7 297 aa13.23□□□□□ -0.29
LINC00349-201ENST00000448748 RBM33Q96EV2 1170 aaKnown RBP13.22□□□□□ -0.29
LINC00349-201ENST00000448748 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
LINC00349-201ENST00000448748 CECR2Q9BXF3 1484 aa13.19□□□□□ -0.3
LINC00349-201ENST00000448748 MLLT3P42568 568 aaPredicted RBP13.19□□□□□ -0.3
LINC00349-201ENST00000448748 PRIM1P49642 420 aaKnown RBP13.19□□□□□ -0.3
LINC00349-201ENST00000448748 EN1Q05925 392 aaPredicted RBP13.18□□□□□ -0.3
LINC00349-201ENST00000448748 SEMA3EO15041 775 aa13.17□□□□□ -0.3
LINC00349-201ENST00000448748 OSBPP22059 807 aa13.17□□□□□ -0.3
LINC00349-201ENST00000448748 C6orf132Q5T0Z8 1188 aa13.17□□□□□ -0.3
LINC00349-201ENST00000448748 ADGRD1Q6QNK2 874 aa13.17□□□□□ -0.3
LINC00349-201ENST00000448748 COL9A1P20849 921 aa13.16□□□□□ -0.3
LINC00349-201ENST00000448748 MAP3K7O43318 606 aa13.15□□□□□ -0.3
LINC00349-201ENST00000448748 PPP1R3GB7ZBB8 358 aa13.14□□□□□ -0.31
LINC00349-201ENST00000448748 TK2O00142 265 aa13.14□□□□□ -0.31
LINC00349-201ENST00000448748 TSR1Q2NL82 804 aaKnown RBP13.14□□□□□ -0.31
LINC00349-201ENST00000448748 SMARCA4P51532 1647 aa13.13□□□□□ -0.31
LINC00349-201ENST00000448748 MMRN1Q13201 1228 aa13.13□□□□□ -0.31
LINC00349-201ENST00000448748 ZBED2Q9BTP6 218 aa13.13□□□□□ -0.31
LINC00349-201ENST00000448748 VPS9D1Q9Y2B5 631 aa13.12□□□□□ -0.31
LINC00349-201ENST00000448748 SLC4A5Q9BY07 1137 aa13.1□□□□□ -0.31
LINC00349-201ENST00000448748 BAZ1AQ9NRL2 1556 aaPredicted RBP13.09□□□□□ -0.31
LINC00349-201ENST00000448748 PEG3Q9GZU2 1588 aa13.08□□□□□ -0.32
LINC00349-201ENST00000448748 HRO43593 1189 aa13.08□□□□□ -0.32
LINC00349-201ENST00000448748 CDHR5Q9HBB8 845 aa13.08□□□□□ -0.32
LINC00349-201ENST00000448748 TESPA1A2RU30 521 aaPredicted RBP13.07□□□□□ -0.32
LINC00349-201ENST00000448748 PROX2Q3B8N5 592 aa13.07□□□□□ -0.32
LINC00349-201ENST00000448748 MYT1LQ9UL68 1186 aa13.06□□□□□ -0.32
LINC00349-201ENST00000448748 NCAPD3P42695 1498 aa13.05□□□□□ -0.32
LINC00349-201ENST00000448748 ATAD2BQ9ULI0 1458 aa13.04□□□□□ -0.32
LINC00349-201ENST00000448748 HMGXB3Q12766 1538 aa13.03□□□□□ -0.32
LINC00349-201ENST00000448748 SMARCA2P51531 1590 aa13.03□□□□□ -0.32
LINC00349-201ENST00000448748 BHMG1C9JSJ3 638 aaPredicted RBP13.01□□□□□ -0.33
LINC00349-201ENST00000448748 RNF166Q96A37 237 aaPredicted RBP13□□□□□ -0.33
LINC00349-201ENST00000448748 MROH2BQ7Z745 1585 aa12.99□□□□□ -0.33
LINC00349-201ENST00000448748 TRIM6-TRIM34B2RNG4 842 aa12.99□□□□□ -0.33
LINC00349-201ENST00000448748 STAC3Q96MF2 364 aa12.99□□□□□ -0.33
LINC00349-201ENST00000448748 NPDC1Q9NQX5 325 aaPredicted RBP12.99□□□□□ -0.33
LINC00349-201ENST00000448748 RABGEF1Q9UJ41 708 aa12.99□□□□□ -0.33
LINC00349-201ENST00000448748 SLC24A1O60721 1099 aa12.98□□□□□ -0.33
LINC00349-201ENST00000448748 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
LINC00349-201ENST00000448748 RBM26Q5T8P6 1007 aaKnown RBP12.97□□□□□ -0.33
LINC00349-201ENST00000448748 SMYD5Q6GMV2 418 aa12.97□□□□□ -0.33
LINC00349-201ENST00000448748 CDCA7LQ96GN5 454 aa12.97□□□□□ -0.33
LINC00349-201ENST00000448748 KIAA1468Q9P260 1216 aa12.97□□□□□ -0.33
LINC00349-201ENST00000448748 TSKSQ9UJT2 592 aa12.97□□□□□ -0.33
LINC00349-201ENST00000448748 PRSS12P56730 875 aa12.96□□□□□ -0.33
LINC00349-201ENST00000448748 NUTM2FA1L443 756 aa12.95□□□□□ -0.34
LINC00349-201ENST00000448748 ONECUT3O60422 494 aaPredicted RBP12.95□□□□□ -0.34
LINC00349-201ENST00000448748 NBPF3Q9H094 633 aa12.95□□□□□ -0.34
LINC00349-201ENST00000448748 MRPL50Q8N5N7 158 aaKnown RBP12.94□□□□□ -0.34
LINC00349-201ENST00000448748 FAM198AQ9UFP1 575 aa12.94□□□□□ -0.34
LINC00349-201ENST00000448748 PTGDRQ13258 359 aa12.92□□□□□ -0.34
LINC00349-201ENST00000448748 SEPT9Q9UHD8 586 aaPredicted RBP12.91□□□□□ -0.34
LINC00349-201ENST00000448748 PACS2Q86VP3 889 aa12.9□□□□□ -0.34
LINC00349-201ENST00000448748 PADI6Q6TGC4 694 aa12.89□□□□□ -0.35
LINC00349-201ENST00000448748 KCTD12Q96CX2 325 aaKnown RBP12.89□□□□□ -0.35
LINC00349-201ENST00000448748 RBM27Q9P2N5 1060 aaKnown RBP12.89□□□□□ -0.35
LINC00349-201ENST00000448748 BAZ1BQ9UIG0 1483 aaKnown RBP12.89□□□□□ -0.35
LINC00349-201ENST00000448748 C3orf80F5H4A9 247 aa12.88□□□□□ -0.35
LINC00349-201ENST00000448748 GOLGA8CPA6NN73 597 aa12.87□□□□□ -0.35
LINC00349-201ENST00000448748 TTC13Q8NBP0 860 aa12.87□□□□□ -0.35
LINC00349-201ENST00000448748 LAPTM4BQ86VI4 370 aa12.86□□□□□ -0.35
LINC00349-201ENST00000448748 SMAPO00193 183 aa12.85□□□□□ -0.35
LINC00349-201ENST00000448748 FCHSD2O94868 740 aa12.85□□□□□ -0.35
LINC00349-201ENST00000448748 WIZO95785 1651 aa12.85□□□□□ -0.35
LINC00349-201ENST00000448748 WNT2BQ93097 391 aa12.84□□□□□ -0.35
LINC00349-201ENST00000448748 NBPF26B4DH59 902 aa12.83□□□□□ -0.36
LINC00349-201ENST00000448748 FAM98CQ17RN3 349 aaKnown RBP12.83□□□□□ -0.36
LINC00349-201ENST00000448748 TATDN2Q93075 761 aa12.83□□□□□ -0.36
LINC00349-201ENST00000448748 ZFRQ96KR1 1074 aaKnown RBP12.83□□□□□ -0.36
LINC00349-201ENST00000448748 PNMA3Q9UL41 463 aa12.83□□□□□ -0.36
LINC00349-201ENST00000448748 RSF1Q96T23 1441 aaPredicted RBP12.82□□□□□ -0.36
LINC00349-201ENST00000448748 TULP1O00294 542 aaPredicted RBP12.82□□□□□ -0.36
LINC00349-201ENST00000448748 GPR37O15354 613 aa12.82□□□□□ -0.36
LINC00349-201ENST00000448748 NUDT18Q6ZVK8 323 aa12.82□□□□□ -0.36
LINC00349-201ENST00000448748 GPIHBP1Q8IV16 184 aa12.81□□□□□ -0.36
LINC00349-201ENST00000448748 HIC1Q14526 733 aa12.79□□□□□ -0.36
LINC00349-201ENST00000448748 THSD4Q6ZMP0 1018 aa12.79□□□□□ -0.36
LINC00349-201ENST00000448748 ANKK1Q8NFD2 765 aa12.79□□□□□ -0.36
LINC00349-201ENST00000448748 FECHP22830 423 aa12.77□□□□□ -0.37
LINC00349-201ENST00000448748 PTPN5P54829 565 aa12.77□□□□□ -0.37
LINC00349-201ENST00000448748 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC00349-201ENST00000448748 HCSTQ9UBK5 93 aa12.77□□□□□ -0.37
LINC00349-201ENST00000448748 BCAMP50895 628 aa12.76□□□□□ -0.37
LINC00349-201ENST00000448748 FAM161AQ3B820 660 aa12.76□□□□□ -0.37
LINC00349-201ENST00000448748 GNPATO15228 680 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms