RNA–Protein interactions for RNA: ENST00000448502.5

UBE2F-217, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-217	ENST00000448502	IQSEC2	Q5JU85	1478 aa		32.27	■■■□□ 2.76
UBE2F-217	ENST00000448502	FAM135A	Q9P2D6	1515 aa		32.26	■■■□□ 2.76
UBE2F-217	ENST00000448502	PKD2	Q13563	968 aa		32.26	■■■□□ 2.75
UBE2F-217	ENST00000448502	DNMT1	P26358	1616 aa	Known RBP	32.26	■■■□□ 2.75
UBE2F-217	ENST00000448502	PZP	P20742	1482 aa		32.23	■■■□□ 2.75
UBE2F-217	ENST00000448502	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.23	■■■□□ 2.75
UBE2F-217	ENST00000448502	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.23	■■■□□ 2.75
UBE2F-217	ENST00000448502	KANK4	Q5T7N3	995 aa	Predicted RBP	32.22	■■■□□ 2.75
UBE2F-217	ENST00000448502	MAP3K1	Q13233	1512 aa		32.21	■■■□□ 2.75
UBE2F-217	ENST00000448502	TSPY4	P0CV99	314 aa		32.21	■■■□□ 2.75
UBE2F-217	ENST00000448502	TSPY10	P0CW01	314 aa		32.21	■■■□□ 2.75
UBE2F-217	ENST00000448502	TNR	Q92752	1358 aa		32.2	■■■□□ 2.75
UBE2F-217	ENST00000448502	WASHC2C	Q9Y4E1	1318 aa		32.19	■■■□□ 2.74
UBE2F-217	ENST00000448502	MAST1	Q9Y2H9	1570 aa		32.19	■■■□□ 2.74
UBE2F-217	ENST00000448502	MYOM3	Q5VTT5	1437 aa		32.14	■■■□□ 2.74
UBE2F-217	ENST00000448502	RNF17	Q9BXT8	1623 aa	Known RBP	32.14	■■■□□ 2.74
UBE2F-217	ENST00000448502	POLR1A	O95602	1720 aa	Predicted RBP	32.13	■■■□□ 2.73
UBE2F-217	ENST00000448502	MIA2	Q96PC5	1412 aa		32.12	■■■□□ 2.73
UBE2F-217	ENST00000448502	NEURL4	Q96JN8	1562 aa		32.11	■■■□□ 2.73
UBE2F-217	ENST00000448502	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.08	■■■□□ 2.73
UBE2F-217	ENST00000448502	ABCC3	O15438	1527 aa		32.07	■■■□□ 2.72
UBE2F-217	ENST00000448502	ZC3H13	Q5T200	1668 aa	Known RBP	32.05	■■■□□ 2.72
UBE2F-217	ENST00000448502	NLRP1	Q9C000	1473 aa		32.05	■■■□□ 2.72
UBE2F-217	ENST00000448502	MROH1	Q8NDA8	1641 aa		32.05	■■■□□ 2.72
UBE2F-217	ENST00000448502	DISP3	Q9P2K9	1392 aa		32.04	■■■□□ 2.72
UBE2F-217	ENST00000448502	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.02	■■■□□ 2.72
UBE2F-217	ENST00000448502	UGGT1	Q9NYU2	1555 aa		32.02	■■■□□ 2.72
UBE2F-217	ENST00000448502	UBAP1L	F5GYI3	381 aa		32	■■■□□ 2.71
UBE2F-217	ENST00000448502	SPATA31D1	Q6ZQQ2	1576 aa		31.99	■■■□□ 2.71
UBE2F-217	ENST00000448502	CEP152	O94986	1710 aa		31.98	■■■□□ 2.71
UBE2F-217	ENST00000448502	THEMIS	Q8N1K5	641 aa	Predicted RBP	31.98	■■■□□ 2.71
UBE2F-217	ENST00000448502	DUOX2	Q9NRD8	1548 aa		31.98	■■■□□ 2.71
UBE2F-217	ENST00000448502	CROCC2	H7BZ55	1655 aa		31.96	■■■□□ 2.71
UBE2F-217	ENST00000448502	ANKLE2	Q86XL3	938 aa		31.96	■■■□□ 2.71
UBE2F-217	ENST00000448502	PTPN23	Q9H3S7	1636 aa		31.95	■■■□□ 2.71
UBE2F-217	ENST00000448502	ERVK-7	P63135	1459 aa		31.95	■■■□□ 2.7
UBE2F-217	ENST00000448502	DEPDC5	O75140	1603 aa		31.94	■■■□□ 2.7
UBE2F-217	ENST00000448502	CFAP65	Q6ZU64	1925 aa	Known RBP	31.94	■■■□□ 2.7
UBE2F-217	ENST00000448502	ABCC5	O15440	1437 aa		31.93	■■■□□ 2.7
UBE2F-217	ENST00000448502	SHANK2	Q9UPX8	1470 aa		31.93	■■■□□ 2.7
UBE2F-217	ENST00000448502	ILDR2	Q71H61	639 aa		31.93	■■■□□ 2.7
UBE2F-217	ENST00000448502	MED14	O60244	1454 aa		31.92	■■■□□ 2.7
UBE2F-217	ENST00000448502	CPS1	P31327	1500 aa		31.91	■■■□□ 2.7
UBE2F-217	ENST00000448502	VWDE	Q8N2E2	1590 aa		31.91	■■■□□ 2.7
UBE2F-217	ENST00000448502	KIF15	Q9NS87	1388 aa		31.91	■■■□□ 2.7
UBE2F-217	ENST00000448502	NPHP4	O75161	1426 aa	Predicted RBP	31.9	■■■□□ 2.7
UBE2F-217	ENST00000448502	PRDM15	P57071	1507 aa	Predicted RBP	31.88	■■■□□ 2.69
UBE2F-217	ENST00000448502	APLP2	Q06481	763 aa		31.87	■■■□□ 2.69
UBE2F-217	ENST00000448502	IQGAP1	P46940	1657 aa		31.86	■■■□□ 2.69
UBE2F-217	ENST00000448502	DAPK1	P53355	1430 aa		31.85	■■■□□ 2.69
UBE2F-217	ENST00000448502	ERBIN	Q96RT1	1412 aa		31.85	■■■□□ 2.69
UBE2F-217	ENST00000448502	FGD6	Q6ZV73	1430 aa		31.84	■■■□□ 2.69
UBE2F-217	ENST00000448502	RRP7BP	Q9NSQ0	103 aa		31.84	■■■□□ 2.69
UBE2F-217	ENST00000448502	UBR1	Q8IWV7	1749 aa		31.83	■■■□□ 2.69
UBE2F-217	ENST00000448502	ARHGAP31	Q2M1Z3	1444 aa		31.8	■■■□□ 2.68
UBE2F-217	ENST00000448502	STRCP1	A6NGW2	1772 aa		31.77	■■■□□ 2.68
UBE2F-217	ENST00000448502	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	31.74	■■■□□ 2.67
UBE2F-217	ENST00000448502	TOM1	O60784	492 aa		31.73	■■■□□ 2.67
UBE2F-217	ENST00000448502	PIP4K2B	P78356	416 aa		31.73	■■■□□ 2.67
UBE2F-217	ENST00000448502	SCAF1	Q9H7N4	1312 aa	Known RBP	31.73	■■■□□ 2.67
UBE2F-217	ENST00000448502	CHIC2	Q9UKJ5	165 aa		31.72	■■■□□ 2.67
UBE2F-217	ENST00000448502	ARHGAP23	Q9P227	1491 aa		31.72	■■■□□ 2.67
UBE2F-217	ENST00000448502	ALK	Q9UM73	1620 aa		31.71	■■■□□ 2.67
UBE2F-217	ENST00000448502	SCAF11	Q99590	1463 aa	Known RBP	31.71	■■■□□ 2.67
UBE2F-217	ENST00000448502	SLIT1	O75093	1534 aa		31.7	■■■□□ 2.67
UBE2F-217	ENST00000448502	ANKRD30A	Q9BXX3	1397 aa		31.7	■■■□□ 2.67
UBE2F-217	ENST00000448502	SOCS7	O14512	581 aa		31.69	■■■□□ 2.66
UBE2F-217	ENST00000448502	HSPA1L	P34931	641 aa		31.69	■■■□□ 2.66
UBE2F-217	ENST00000448502	PIK3C2B	O00750	1634 aa		31.68	■■■□□ 2.66
UBE2F-217	ENST00000448502	LTK	P29376	864 aa		31.68	■■■□□ 2.66
UBE2F-217	ENST00000448502	KANK1	Q14678	1352 aa		31.68	■■■□□ 2.66
UBE2F-217	ENST00000448502	LRRC7	Q96NW7	1537 aa		31.67	■■■□□ 2.66
UBE2F-217	ENST00000448502	LMTK2	Q8IWU2	1503 aa		31.66	■■■□□ 2.66
UBE2F-217	ENST00000448502	SYNM	O15061	1565 aa		31.64	■■■□□ 2.66
UBE2F-217	ENST00000448502	TXNDC2	Q86VQ3	553 aa		31.63	■■■□□ 2.65
UBE2F-217	ENST00000448502	ADGRL2	O95490	1459 aa		31.62	■■■□□ 2.65
UBE2F-217	ENST00000448502	KDM5A	P29375	1690 aa	Known RBP	31.57	■■■□□ 2.65
UBE2F-217	ENST00000448502	TMEM2	Q9UHN6	1383 aa		31.57	■■■□□ 2.64
UBE2F-217	ENST00000448502	EFCAB6	Q5THR3	1501 aa		31.57	■■■□□ 2.64
UBE2F-217	ENST00000448502	IDI1	Q13907	227 aa		31.55	■■■□□ 2.64
UBE2F-217	ENST00000448502	EID1	Q9Y6B2	187 aa		31.55	■■■□□ 2.64
UBE2F-217	ENST00000448502	MED1	Q15648	1581 aa	Predicted RBP	31.55	■■■□□ 2.64
UBE2F-217	ENST00000448502	FAM50A	Q14320	339 aa	Known RBP	31.54	■■■□□ 2.64
UBE2F-217	ENST00000448502	NOS1	P29475	1434 aa		31.54	■■■□□ 2.64
UBE2F-217	ENST00000448502	XIRP1	Q702N8	1843 aa	Known RBP	31.52	■■■□□ 2.64
UBE2F-217	ENST00000448502	STAG3	Q9UJ98	1225 aa		31.52	■■■□□ 2.64
UBE2F-217	ENST00000448502	ANKRD50	Q9ULJ7	1429 aa		31.49	■■■□□ 2.63
UBE2F-217	ENST00000448502	ADGRB3	O60242	1522 aa		31.47	■■■□□ 2.63
UBE2F-217	ENST00000448502	TET3	O43151	1660 aa		31.44	■■■□□ 2.62
UBE2F-217	ENST00000448502	RPRD2	Q5VT52	1461 aa	Known RBP	31.42	■■■□□ 2.62
UBE2F-217	ENST00000448502	SENP3	Q9H4L4	574 aa	Predicted RBP	31.41	■■■□□ 2.62
UBE2F-217	ENST00000448502	SLC52A1	Q9NWF4	448 aa		31.4	■■■□□ 2.62
UBE2F-217	ENST00000448502	MYO5B	Q9ULV0	1848 aa		31.38	■■■□□ 2.61
UBE2F-217	ENST00000448502	SLC26A8	Q96RN1	970 aa		31.37	■■■□□ 2.61
UBE2F-217	ENST00000448502	UNC13B	O14795	1591 aa		31.37	■■■□□ 2.61
UBE2F-217	ENST00000448502	GCC2	Q8IWJ2	1684 aa		31.35	■■■□□ 2.61
UBE2F-217	ENST00000448502	KCNA6	P17658	529 aa		31.34	■■■□□ 2.61
UBE2F-217	ENST00000448502	TMEM94	Q12767	1356 aa		31.33	■■■□□ 2.61
UBE2F-217	ENST00000448502	ZFYVE9	O95405	1425 aa		31.31	■■■□□ 2.6
UBE2F-217	ENST00000448502	NWD1	Q149M9	1564 aa		31.3	■■■□□ 2.6

Retrieved 100 of 20,778 RNA–protein pairs in 300.9 ms