RNA–Protein interactions for RNA: ENST00000448303.5

RBM39-217, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-217ENST00000448303 KDM4FA0A1W2PPD8 638 aa8.92□□□□□ -0.98
RBM39-217ENST00000448303 PTGDRQ13258 359 aa8.92□□□□□ -0.98
RBM39-217ENST00000448303 HS3ST6Q96QI5 342 aa8.91□□□□□ -0.98
RBM39-217ENST00000448303 ZNF316A6NFI3 1004 aaPredicted RBP8.9□□□□□ -0.98
RBM39-217ENST00000448303 PHF14O94880 888 aa8.9□□□□□ -0.98
RBM39-217ENST00000448303 FECHP22830 423 aa8.9□□□□□ -0.98
RBM39-217ENST00000448303 AMHR2Q16671 573 aa8.9□□□□□ -0.98
RBM39-217ENST00000448303 CCDC102AQ96A19 550 aa8.9□□□□□ -0.98
RBM39-217ENST00000448303 EPAS1Q99814 870 aa8.9□□□□□ -0.98
RBM39-217ENST00000448303 NPDC1Q9NQX5 325 aaPredicted RBP8.89□□□□□ -0.99
RBM39-217ENST00000448303 PCDHGA4Q9Y5G9 962 aa8.88□□□□□ -0.99
RBM39-217ENST00000448303 FAM205CA6NFA0 338 aa8.87□□□□□ -0.99
RBM39-217ENST00000448303 EN1Q05925 392 aaPredicted RBP8.87□□□□□ -0.99
RBM39-217ENST00000448303 DOK7Q18PE1 504 aa8.86□□□□□ -0.99
RBM39-217ENST00000448303 IL27Q8NEV9 243 aa8.86□□□□□ -0.99
RBM39-217ENST00000448303 PCDHGA10Q9Y5H3 936 aa8.86□□□□□ -0.99
RBM39-217ENST00000448303 RIMBP2O15034 1052 aa8.83□□□□□ -1
RBM39-217ENST00000448303 HOXB3P14651 431 aaPredicted RBP8.83□□□□□ -1
RBM39-217ENST00000448303 TYW1BQ6NUM6 668 aa8.83□□□□□ -1
RBM39-217ENST00000448303 PARP9Q8IXQ6 854 aa8.83□□□□□ -1
RBM39-217ENST00000448303 FBXW7Q969H0 707 aa8.83□□□□□ -1
RBM39-217ENST00000448303 FAM117AQ9C073 453 aa8.83□□□□□ -1
RBM39-217ENST00000448303 JPH4Q96JJ6 628 aa8.82□□□□□ -1
RBM39-217ENST00000448303 CDHR5Q9HBB8 845 aa8.82□□□□□ -1
RBM39-217ENST00000448303 C14orf37Q86TY3 774 aa8.81□□□□□ -1
RBM39-217ENST00000448303 ZNF710Q8N1W2 664 aa8.81□□□□□ -1
RBM39-217ENST00000448303 PLEKHG3A1L390 1219 aa8.8□□□□□ -1
RBM39-217ENST00000448303 MAP3K7O43318 606 aa8.8□□□□□ -1
RBM39-217ENST00000448303 FOSBP53539 338 aa8.8□□□□□ -1
RBM39-217ENST00000448303 RNF166Q96A37 237 aaPredicted RBP8.8□□□□□ -1
RBM39-217ENST00000448303 DDRGK1Q96HY6 314 aa8.8□□□□□ -1
RBM39-217ENST00000448303 TMUB1Q9BVT8 246 aa8.8□□□□□ -1
RBM39-217ENST00000448303 ZSWIM6Q9HCJ5 1215 aa8.8□□□□□ -1
RBM39-217ENST00000448303 TSR1Q2NL82 804 aaKnown RBP8.79□□□□□ -1
RBM39-217ENST00000448303 ARSIQ5FYB1 569 aa8.77□□□□□ -1.01
RBM39-217ENST00000448303 GPR153Q6NV75 609 aa8.77□□□□□ -1.01
RBM39-217ENST00000448303 RBM33Q96EV2 1170 aaKnown RBP8.77□□□□□ -1.01
RBM39-217ENST00000448303 C6orf132Q5T0Z8 1188 aa8.76□□□□□ -1.01
RBM39-217ENST00000448303 TTC13Q8NBP0 860 aa8.76□□□□□ -1.01
RBM39-217ENST00000448303 CERKQ8TCT0 537 aa8.76□□□□□ -1.01
RBM39-217ENST00000448303 REPIN1Q9BWE0 567 aaKnown RBP8.76□□□□□ -1.01
RBM39-217ENST00000448303 GOPCQ9HD26 462 aa8.76□□□□□ -1.01
RBM39-217ENST00000448303 ZDHHC16Q969W1 377 aa8.75□□□□□ -1.01
RBM39-217ENST00000448303 GIGYF2Q6Y7W6 1299 aaKnown RBP8.74□□□□□ -1.01
RBM39-217ENST00000448303 PHOX2BQ99453 314 aa8.74□□□□□ -1.01
RBM39-217ENST00000448303 MS4A1P11836 297 aa8.73□□□□□ -1.01
RBM39-217ENST00000448303 TTLL12Q14166 644 aaPredicted RBP8.73□□□□□ -1.01
RBM39-217ENST00000448303 NUDT7P0C024 238 aa8.72□□□□□ -1.01
RBM39-217ENST00000448303 HOXB1P14653 301 aaPredicted RBP8.72□□□□□ -1.01
RBM39-217ENST00000448303 KHSRPQ92945 711 aaKnown RBP eCLIP8.72□□□□□ -1.013e-9■■□□□ 13.4
RBM39-217ENST00000448303 RBM27Q9P2N5 1060 aaKnown RBP8.72□□□□□ -1.01
RBM39-217ENST00000448303 OATP04181 439 aa8.71□□□□□ -1.02
RBM39-217ENST00000448303 CLCN1P35523 988 aa8.71□□□□□ -1.02
RBM39-217ENST00000448303 ZNF454Q8N9F8 522 aa8.71□□□□□ -1.02
RBM39-217ENST00000448303 ADAM33Q9BZ11 813 aa8.71□□□□□ -1.02
RBM39-217ENST00000448303 METTL3Q86U44 580 aaKnown RBP8.7□□□□□ -1.02
RBM39-217ENST00000448303 GPCPD1Q9NPB8 672 aa8.7□□□□□ -1.02
RBM39-217ENST00000448303 ADGRG1Q9Y653 693 aa8.7□□□□□ -1.02
RBM39-217ENST00000448303 PADI6Q6TGC4 694 aa8.68□□□□□ -1.02
RBM39-217ENST00000448303 PXYLP1Q8TE99 480 aa8.68□□□□□ -1.02
RBM39-217ENST00000448303 SSTR3P32745 418 aaPredicted RBP8.67□□□□□ -1.02
RBM39-217ENST00000448303 PRSS12P56730 875 aa8.67□□□□□ -1.02
RBM39-217ENST00000448303 MDM2Q00987 491 aaPredicted RBP8.67□□□□□ -1.02
RBM39-217ENST00000448303 MYT1LQ9UL68 1186 aa8.67□□□□□ -1.02
RBM39-217ENST00000448303 PSDA5PKW4 1024 aaPredicted RBP8.66□□□□□ -1.02
RBM39-217ENST00000448303 FAM161AQ3B820 660 aa8.66□□□□□ -1.02
RBM39-217ENST00000448303 LHX6Q9UPM6 363 aa8.66□□□□□ -1.02
RBM39-217ENST00000448303 BCL2L12Q9HB09 334 aa8.65□□□□□ -1.02
RBM39-217ENST00000448303 FAM217BQ9NTX9 383 aaPredicted RBP8.65□□□□□ -1.02
RBM39-217ENST00000448303 SH3D19Q5HYK7 790 aa8.64□□□□□ -1.03
RBM39-217ENST00000448303 CDCA7LQ96GN5 454 aa8.64□□□□□ -1.03
RBM39-217ENST00000448303 COL9A1P20849 921 aa8.62□□□□□ -1.03
RBM39-217ENST00000448303 PPP4R3BQ5MIZ7 849 aa8.62□□□□□ -1.03
RBM39-217ENST00000448303 ZMYND15Q9H091 742 aa8.62□□□□□ -1.03
RBM39-217ENST00000448303 FAM198AQ9UFP1 575 aa8.62□□□□□ -1.03
RBM39-217ENST00000448303 ERBB3P21860 1342 aa8.61□□□□□ -1.03
RBM39-217ENST00000448303 RBM46Q8TBY0 533 aaKnown RBP8.61□□□□□ -1.03
RBM39-217ENST00000448303 EYA1Q99502 592 aa8.61□□□□□ -1.03
RBM39-217ENST00000448303 RSPH6AQ9H0K4 717 aa8.61□□□□□ -1.03
RBM39-217ENST00000448303 ONECUT3O60422 494 aaPredicted RBP8.6□□□□□ -1.03
RBM39-217ENST00000448303 SKIV2LQ15477 1246 aaKnown RBP8.6□□□□□ -1.03
RBM39-217ENST00000448303 PCMTD1Q96MG8 357 aaPredicted RBP8.6□□□□□ -1.03
RBM39-217ENST00000448303 ARXQ96QS3 562 aa8.6□□□□□ -1.03
RBM39-217ENST00000448303 BEGAINQ9BUH8 593 aa8.6□□□□□ -1.03
RBM39-217ENST00000448303 PPP1R3GB7ZBB8 358 aa8.59□□□□□ -1.03
RBM39-217ENST00000448303 NLRP7Q8WX94 980 aa8.59□□□□□ -1.03
RBM39-217ENST00000448303 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.58□□□□□ -1.04
RBM39-217ENST00000448303 FLIIQ13045 1269 aa8.58□□□□□ -1.04
RBM39-217ENST00000448303 TSKSQ9UJT2 592 aa8.58□□□□□ -1.04
RBM39-217ENST00000448303 PTPREP23469 700 aa8.57□□□□□ -1.04
RBM39-217ENST00000448303 RCCD1A6NED2 376 aa8.55□□□□□ -1.04
RBM39-217ENST00000448303 C3orf80F5H4A9 247 aa8.55□□□□□ -1.04
RBM39-217ENST00000448303 SUPT5HO00267 1087 aaKnown RBP8.55□□□□□ -1.04
RBM39-217ENST00000448303 VARS2Q5ST30 1063 aaKnown RBP8.55□□□□□ -1.04
RBM39-217ENST00000448303 TRIM6-TRIM34B2RNG4 842 aa8.54□□□□□ -1.04
RBM39-217ENST00000448303 MYSM1Q5VVJ2 828 aa8.54□□□□□ -1.04
RBM39-217ENST00000448303 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.54□□□□□ -1.04
RBM39-217ENST00000448303 DIXDC1Q155Q3 683 aa8.53□□□□□ -1.04
RBM39-217ENST00000448303 PROCA1Q8NCQ7 364 aaPredicted RBP8.53□□□□□ -1.04
RBM39-217ENST00000448303 TATDN2Q93075 761 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms