RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 PLA2R1Q13018 1463 aa22.55■■□□□ 1.2
OTUB1-204ENST00000447683 ARID4BQ4LE39 1312 aaPredicted RBP22.55■■□□□ 1.2
OTUB1-204ENST00000447683 TRAPPC8Q9Y2L5 1435 aa22.55■■□□□ 1.2
OTUB1-204ENST00000447683 CCDC144AA2RUR9 1427 aa22.54■■□□□ 1.2
OTUB1-204ENST00000447683 WDR7Q9Y4E6 1490 aa22.53■■□□□ 1.2
OTUB1-204ENST00000447683 ATP10AO60312 1499 aa22.52■■□□□ 1.2
OTUB1-204ENST00000447683 RTEL1-TNFRSF6BF6WH68 1400 aa22.51■■□□□ 1.19
OTUB1-204ENST00000447683 DCAF11Q8TEB1 546 aa22.51■■□□□ 1.19
OTUB1-204ENST00000447683 ABCA9Q8IUA7 1624 aa22.49■■□□□ 1.19
OTUB1-204ENST00000447683 TRPM1Q7Z4N2 1603 aa22.49■■□□□ 1.19
OTUB1-204ENST00000447683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.48■■□□□ 1.194e-8■□□□□ 9.8
OTUB1-204ENST00000447683 CARD11Q9BXL7 1154 aa22.48■■□□□ 1.19
OTUB1-204ENST00000447683 KDM2AQ9Y2K7 1162 aa22.48■■□□□ 1.19
OTUB1-204ENST00000447683 ZFYVE16Q7Z3T8 1539 aa22.47■■□□□ 1.19
OTUB1-204ENST00000447683 PRAG1Q86YV5 1406 aa22.47■■□□□ 1.19
OTUB1-204ENST00000447683 DHX29Q7Z478 1369 aaKnown RBP22.47■■□□□ 1.19
OTUB1-204ENST00000447683 CCDC184Q52MB2 194 aa22.45■■□□□ 1.18
OTUB1-204ENST00000447683 SPAG9O60271 1321 aaKnown RBP22.44■■□□□ 1.18
OTUB1-204ENST00000447683 A2MP01023 1474 aa22.44■■□□□ 1.18
OTUB1-204ENST00000447683 ROCK2O75116 1388 aaKnown RBP22.44■■□□□ 1.18
OTUB1-204ENST00000447683 HNRNPUQ00839 825 aaKnown RBP eCLIP22.43■■□□□ 1.18
OTUB1-204ENST00000447683 INO80Q9ULG1 1556 aaPredicted RBP22.41■■□□□ 1.18
OTUB1-204ENST00000447683 DEPDC5O75140 1603 aa22.41■■□□□ 1.18
OTUB1-204ENST00000447683 LAMC1P11047 1609 aa22.41■■□□□ 1.18
OTUB1-204ENST00000447683 FANCAO15360 1455 aa22.41■■□□□ 1.18
OTUB1-204ENST00000447683 AFAP1Q8N556 730 aa22.4■■□□□ 1.18
OTUB1-204ENST00000447683 GPRASP1Q5JY77 1395 aa22.39■■□□□ 1.18
OTUB1-204ENST00000447683 E9PCH4 1651 aa22.39■■□□□ 1.17
OTUB1-204ENST00000447683 ST20-MTHFSA0A0A6YYL1 179 aa22.39■■□□□ 1.17
OTUB1-204ENST00000447683 MRS2Q9HD23 443 aa22.38■■□□□ 1.17
OTUB1-204ENST00000447683 ATP7AQ04656 1500 aa22.38■■□□□ 1.17
OTUB1-204ENST00000447683 ASXL2Q76L83 1435 aa22.37■■□□□ 1.17
OTUB1-204ENST00000447683 EIF2AK4Q9P2K8 1649 aaKnown RBP22.37■■□□□ 1.17
OTUB1-204ENST00000447683 FKBP8Q14318 412 aa22.36■■□□□ 1.17
OTUB1-204ENST00000447683 ANP32EQ9BTT0 268 aa22.36■■□□□ 1.17
OTUB1-204ENST00000447683 RGL3Q3MIN7 710 aa22.35■■□□□ 1.17
OTUB1-204ENST00000447683 PRDM15P57071 1507 aaPredicted RBP22.34■■□□□ 1.17
OTUB1-204ENST00000447683 ADGRL1O94910 1474 aa22.33■■□□□ 1.17
OTUB1-204ENST00000447683 VWDEQ8N2E2 1590 aa22.33■■□□□ 1.17
OTUB1-204ENST00000447683 TET3O43151 1660 aa22.33■■□□□ 1.16
OTUB1-204ENST00000447683 NEFLP07196 543 aa22.32■■□□□ 1.16
OTUB1-204ENST00000447683 POLR3GLQ9BT43 218 aa22.32■■□□□ 1.16
OTUB1-204ENST00000447683 TRPM2O94759 1503 aa22.32■■□□□ 1.16
OTUB1-204ENST00000447683 SPHKAPQ2M3C7 1700 aa22.32■■□□□ 1.16
OTUB1-204ENST00000447683 SCAPERQ9BY12 1400 aa22.31■■□□□ 1.16
OTUB1-204ENST00000447683 OSCARQ8IYS5 282 aa22.3■■□□□ 1.16
OTUB1-204ENST00000447683 CEP152O94986 1710 aa22.3■■□□□ 1.16
OTUB1-204ENST00000447683 PTPRTO14522 1441 aa22.3■■□□□ 1.16
OTUB1-204ENST00000447683 NBPF1Q3BBV0 1214 aa22.3■■□□□ 1.16
OTUB1-204ENST00000447683 FAM9BQ8IZU0 186 aa22.29■■□□□ 1.16
OTUB1-204ENST00000447683 RNF17Q9BXT8 1623 aaKnown RBP22.29■■□□□ 1.16
OTUB1-204ENST00000447683 ZBED9Q6R2W3 1325 aa22.26■■□□□ 1.15
OTUB1-204ENST00000447683 KIDINS220Q9ULH0 1771 aa22.25■■□□□ 1.15
OTUB1-204ENST00000447683 MROH1Q8NDA8 1641 aa22.25■■□□□ 1.15
OTUB1-204ENST00000447683 CLTCL1P53675 1640 aa22.25■■□□□ 1.15
OTUB1-204ENST00000447683 KANK1Q14678 1352 aa22.24■■□□□ 1.15
OTUB1-204ENST00000447683 KTN1Q86UP2 1357 aaKnown RBP22.24■■□□□ 1.15
OTUB1-204ENST00000447683 MADDQ8WXG6 1647 aa22.24■■□□□ 1.15
OTUB1-204ENST00000447683 COL17A1Q9UMD9 1497 aaPredicted RBP22.23■■□□□ 1.15
OTUB1-204ENST00000447683 BCANQ96GW7 911 aa22.22■■□□□ 1.15
OTUB1-204ENST00000447683 NEURL4Q96JN8 1562 aa22.21■■□□□ 1.15
OTUB1-204ENST00000447683 CFAP74Q9C0B2 1584 aa22.21■■□□□ 1.15
OTUB1-204ENST00000447683 NPM1P06748 294 aaKnown RBP eCLIP22.2■■□□□ 1.15
OTUB1-204ENST00000447683 STAC3Q96MF2 364 aa22.2■■□□□ 1.15
OTUB1-204ENST00000447683 TESK2Q96S53 571 aa22.2■■□□□ 1.15
OTUB1-204ENST00000447683 ZNF518AQ6AHZ1 1483 aa22.2■■□□□ 1.14
OTUB1-204ENST00000447683 KIF3BO15066 747 aa22.19■■□□□ 1.14
OTUB1-204ENST00000447683 IQGAP1P46940 1657 aa22.17■■□□□ 1.14
OTUB1-204ENST00000447683 RALBP1Q15311 655 aa22.17■■□□□ 1.14
OTUB1-204ENST00000447683 DISP3Q9P2K9 1392 aa22.15■■□□□ 1.14
OTUB1-204ENST00000447683 PNISRQ8TF01 805 aaKnown RBP22.14■■□□□ 1.14
OTUB1-204ENST00000447683 MYT1LQ9UL68 1186 aa22.14■■□□□ 1.14
OTUB1-204ENST00000447683 CD109Q6YHK3 1445 aa22.14■■□□□ 1.14
OTUB1-204ENST00000447683 EFCAB6Q5THR3 1501 aa22.14■■□□□ 1.13
OTUB1-204ENST00000447683 LMTK2Q8IWU2 1503 aa22.14■■□□□ 1.13
OTUB1-204ENST00000447683 BRD4O60885 1362 aaPredicted RBP22.14■■□□□ 1.13
OTUB1-204ENST00000447683 MYBBP1AQ9BQG0 1328 aaKnown RBP22.14■■□□□ 1.13
OTUB1-204ENST00000447683 CNGB1Q14028 1251 aaPredicted RBP22.13■■□□□ 1.13
OTUB1-204ENST00000447683 KIAA1210Q9ULL0 1709 aa22.13■■□□□ 1.13
OTUB1-204ENST00000447683 POGZQ7Z3K3 1410 aa22.12■■□□□ 1.13
OTUB1-204ENST00000447683 PER1O15534 1290 aaPredicted RBP22.12■■□□□ 1.13
OTUB1-204ENST00000447683 PARD3Q8TEW0 1356 aa22.11■■□□□ 1.13
OTUB1-204ENST00000447683 MLH3Q9UHC1 1453 aa22.11■■□□□ 1.13
OTUB1-204ENST00000447683 TMC1Q8TDI8 760 aa22.11■■□□□ 1.13
OTUB1-204ENST00000447683 PPRC1Q5VV67 1664 aaKnown RBP22.1■■□□□ 1.13
OTUB1-204ENST00000447683 KIF1BO60333 1816 aa22.1■■□□□ 1.13
OTUB1-204ENST00000447683 TMF1P82094 1093 aa22.1■■□□□ 1.13
OTUB1-204ENST00000447683 LRPPRCP42704 1394 aaKnown RBP22.09■■□□□ 1.13
OTUB1-204ENST00000447683 TSHZ2Q9NRE2 1034 aa22.09■■□□□ 1.13
OTUB1-204ENST00000447683 WASHC2CQ9Y4E1 1318 aa22.09■■□□□ 1.13
OTUB1-204ENST00000447683 ERICH6BQ5W0A0 696 aa22.08■■□□□ 1.12
OTUB1-204ENST00000447683 HECW2Q9P2P5 1572 aa22.08■■□□□ 1.12
OTUB1-204ENST00000447683 IFT172Q9UG01 1749 aa22.07■■□□□ 1.12
OTUB1-204ENST00000447683 SCAF11Q99590 1463 aaKnown RBP22.07■■□□□ 1.12
OTUB1-204ENST00000447683 FRMPD1Q5SYB0 1578 aa22.06■■□□□ 1.12
OTUB1-204ENST00000447683 MYOM2P54296 1465 aa22.06■■□□□ 1.12
OTUB1-204ENST00000447683 SMG6Q86US8 1419 aaKnown RBP22.06■■□□□ 1.12
OTUB1-204ENST00000447683 MAP3K4Q9Y6R4 1608 aa22.05■■□□□ 1.12
OTUB1-204ENST00000447683 UGGT1Q9NYU2 1555 aa22.05■■□□□ 1.12
OTUB1-204ENST00000447683 NEO1Q92859 1461 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms