RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 ANKRD30AQ9BXX3 1397 aa18.26■□□□□ 0.51
RFC4-208ENST00000447345 PTPRKQ15262 1439 aa18.25■□□□□ 0.51
RFC4-208ENST00000447345 MROH1Q8NDA8 1641 aa18.24■□□□□ 0.51
RFC4-208ENST00000447345 KDM5DQ9BY66 1539 aa18.23■□□□□ 0.51
RFC4-208ENST00000447345 NCOA1Q15788 1441 aa18.23■□□□□ 0.51
RFC4-208ENST00000447345 ERBINQ96RT1 1412 aa18.23■□□□□ 0.51
RFC4-208ENST00000447345 CNTLNQ9NXG0 1405 aa18.23■□□□□ 0.51
RFC4-208ENST00000447345 ZC3H13Q5T200 1668 aaKnown RBP18.22■□□□□ 0.51
RFC4-208ENST00000447345 PREX1Q8TCU6 1659 aa18.22■□□□□ 0.51
RFC4-208ENST00000447345 CEBPAP49715 358 aaPredicted RBP18.22■□□□□ 0.51
RFC4-208ENST00000447345 DEPDC5O75140 1603 aa18.22■□□□□ 0.51
RFC4-208ENST00000447345 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.21■□□□□ 0.51
RFC4-208ENST00000447345 PRDM15P57071 1507 aaPredicted RBP18.19■□□□□ 0.5
RFC4-208ENST00000447345 CAMSAP1Q5T5Y3 1602 aa18.19■□□□□ 0.5
RFC4-208ENST00000447345 FAM135AQ9P2D6 1515 aa18.18■□□□□ 0.5
RFC4-208ENST00000447345 CFAP65Q6ZU64 1925 aaKnown RBP18.17■□□□□ 0.5
RFC4-208ENST00000447345 ABCC3O15438 1527 aa18.17■□□□□ 0.5
RFC4-208ENST00000447345 GCC2Q8IWJ2 1684 aa18.16■□□□□ 0.5
RFC4-208ENST00000447345 SETD1BQ9UPS6 1966 aaKnown RBP18.15■□□□□ 0.5
RFC4-208ENST00000447345 ZMYM3Q14202 1370 aa18.15■□□□□ 0.5
RFC4-208ENST00000447345 ANKRD50Q9ULJ7 1429 aa18.15■□□□□ 0.5
RFC4-208ENST00000447345 LMTK3Q96Q04 1460 aa18.14■□□□□ 0.5
RFC4-208ENST00000447345 MYO3AQ8NEV4 1616 aa18.14■□□□□ 0.49
RFC4-208ENST00000447345 ROCK1Q13464 1354 aa18.14■□□□□ 0.49
RFC4-208ENST00000447345 WASHC2CQ9Y4E1 1318 aa18.13■□□□□ 0.49
RFC4-208ENST00000447345 UNC13BO14795 1591 aa18.13■□□□□ 0.49
RFC4-208ENST00000447345 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.12■□□□□ 0.499e-7■■□□□ 11.9
RFC4-208ENST00000447345 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
RFC4-208ENST00000447345 PZPP20742 1482 aa18.09■□□□□ 0.49
RFC4-208ENST00000447345 ZNF142P52746 1687 aaPredicted RBP18.09■□□□□ 0.49
RFC4-208ENST00000447345 VWDEQ8N2E2 1590 aa18.08■□□□□ 0.49
RFC4-208ENST00000447345 NPATQ14207 1427 aa18.08■□□□□ 0.49
RFC4-208ENST00000447345 UHRF1BP1Q6BDS2 1440 aa18.08■□□□□ 0.49
RFC4-208ENST00000447345 KANK1Q14678 1352 aa18.07■□□□□ 0.48
RFC4-208ENST00000447345 TET3O43151 1660 aa18.05■□□□□ 0.48
RFC4-208ENST00000447345 IQGAP3Q86VI3 1631 aa18.05■□□□□ 0.48
RFC4-208ENST00000447345 CEP170BQ9Y4F5 1589 aaPredicted RBP18.04■□□□□ 0.48
RFC4-208ENST00000447345 EFCAB6Q5THR3 1501 aa18.04■□□□□ 0.48
RFC4-208ENST00000447345 HSPA2P54652 639 aa18.04■□□□□ 0.48
RFC4-208ENST00000447345 LMTK2Q8IWU2 1503 aa18.03■□□□□ 0.48
RFC4-208ENST00000447345 FBXO31Q5XUX0 539 aaPredicted RBP18.03■□□□□ 0.48
RFC4-208ENST00000447345 NAIPQ13075 1403 aa18.03■□□□□ 0.48
RFC4-208ENST00000447345 SPATA31D1Q6ZQQ2 1576 aa18.02■□□□□ 0.48
RFC4-208ENST00000447345 ERVK-7P63135 1459 aa18.01■□□□□ 0.47
RFC4-208ENST00000447345 TNRQ92752 1358 aa18.01■□□□□ 0.47
RFC4-208ENST00000447345 E9PCH4 1651 aa18■□□□□ 0.47
RFC4-208ENST00000447345 HFM1A2PYH4 1435 aa18■□□□□ 0.47
RFC4-208ENST00000447345 STRCQ7RTU9 1775 aa17.98■□□□□ 0.47
RFC4-208ENST00000447345 ARHGAP31Q2M1Z3 1444 aa17.97■□□□□ 0.47
RFC4-208ENST00000447345 SYNMO15061 1565 aa17.96■□□□□ 0.46
RFC4-208ENST00000447345 A2ML1A8K2U0 1454 aa17.95■□□□□ 0.46
RFC4-208ENST00000447345 NUP155O75694 1391 aa17.95■□□□□ 0.46
RFC4-208ENST00000447345 POLR1AO95602 1720 aaPredicted RBP17.95■□□□□ 0.46
RFC4-208ENST00000447345 PIK3C2BO00750 1634 aa17.94■□□□□ 0.46
RFC4-208ENST00000447345 UBR1Q8IWV7 1749 aa17.94■□□□□ 0.46
RFC4-208ENST00000447345 NLRP1Q9C000 1473 aa17.94■□□□□ 0.46
RFC4-208ENST00000447345 SPHKAPQ2M3C7 1700 aa17.92■□□□□ 0.46
RFC4-208ENST00000447345 MYO5BQ9ULV0 1848 aa17.92■□□□□ 0.46
RFC4-208ENST00000447345 UGGT1Q9NYU2 1555 aa17.91■□□□□ 0.46
RFC4-208ENST00000447345 RPRD2Q5VT52 1461 aaKnown RBP17.91■□□□□ 0.46
RFC4-208ENST00000447345 TRIM52Q96A61 297 aa17.88■□□□□ 0.45
RFC4-208ENST00000447345 NOS1P29475 1434 aa17.88■□□□□ 0.45
RFC4-208ENST00000447345 PLA2R1Q13018 1463 aa17.86■□□□□ 0.45
RFC4-208ENST00000447345 KDM5AP29375 1690 aaKnown RBP17.85■□□□□ 0.45
RFC4-208ENST00000447345 SETD5Q9C0A6 1442 aa17.85■□□□□ 0.45
RFC4-208ENST00000447345 ADGRB3O60242 1522 aa17.84■□□□□ 0.45
RFC4-208ENST00000447345 NEURL4Q96JN8 1562 aa17.83■□□□□ 0.44
RFC4-208ENST00000447345 RAB3GAP2Q9H2M9 1393 aa17.81■□□□□ 0.44
RFC4-208ENST00000447345 NCKAP5LQ9HCH0 1330 aa17.81■□□□□ 0.44
RFC4-208ENST00000447345 CLTCL1P53675 1640 aa17.8■□□□□ 0.44
RFC4-208ENST00000447345 TMEM131LA2VDJ0 1609 aa17.8■□□□□ 0.44
RFC4-208ENST00000447345 STAG3Q9UJ98 1225 aa17.79■□□□□ 0.44
RFC4-208ENST00000447345 IQGAP1P46940 1657 aa17.79■□□□□ 0.44
RFC4-208ENST00000447345 KIF1BO60333 1816 aa17.79■□□□□ 0.44
RFC4-208ENST00000447345 TRPM2O94759 1503 aa17.78■□□□□ 0.44
RFC4-208ENST00000447345 IDI1Q13907 227 aa17.78■□□□□ 0.44
RFC4-208ENST00000447345 THEMISQ8N1K5 641 aaPredicted RBP17.78■□□□□ 0.44
RFC4-208ENST00000447345 SLC4A1APQ9BWU0 796 aaKnown RBP17.78■□□□□ 0.44
RFC4-208ENST00000447345 PKD2Q13563 968 aa17.76■□□□□ 0.43
RFC4-208ENST00000447345 SLIT1O75093 1534 aa17.76■□□□□ 0.43
RFC4-208ENST00000447345 PTPRTO14522 1441 aa17.75■□□□□ 0.43
RFC4-208ENST00000447345 SLC52A1Q9NWF4 448 aa17.75■□□□□ 0.43
RFC4-208ENST00000447345 CHGAP10645 457 aaKnown RBP17.74■□□□□ 0.43
RFC4-208ENST00000447345 SCAF11Q99590 1463 aaKnown RBP17.74■□□□□ 0.43
RFC4-208ENST00000447345 ARHGAP23Q9P227 1491 aa17.74■□□□□ 0.43
RFC4-208ENST00000447345 FOXD1Q16676 465 aa17.73■□□□□ 0.43
RFC4-208ENST00000447345 DMRT2Q9Y5R5 561 aa17.73■□□□□ 0.43
RFC4-208ENST00000447345 ANKLE2Q86XL3 938 aa17.72■□□□□ 0.43
RFC4-208ENST00000447345 TMEM2Q9UHN6 1383 aa17.71■□□□□ 0.43
RFC4-208ENST00000447345 MPHOSPH9Q99550 1183 aa17.71■□□□□ 0.43
RFC4-208ENST00000447345 NPHP4O75161 1426 aaPredicted RBP17.71■□□□□ 0.43
RFC4-208ENST00000447345 MED14O60244 1454 aa17.69■□□□□ 0.42
RFC4-208ENST00000447345 RIMS2Q9UQ26 1411 aa17.67■□□□□ 0.42
RFC4-208ENST00000447345 LTKP29376 864 aa17.67■□□□□ 0.42
RFC4-208ENST00000447345 TXNDC2Q86VQ3 553 aa17.67■□□□□ 0.42
RFC4-208ENST00000447345 SENP3Q9H4L4 574 aaPredicted RBP17.67■□□□□ 0.42
RFC4-208ENST00000447345 EID1Q9Y6B2 187 aa17.67■□□□□ 0.42
RFC4-208ENST00000447345 ZFYVE9O95405 1425 aa17.66■□□□□ 0.42
RFC4-208ENST00000447345 STRCP1A6NGW2 1772 aa17.65■□□□□ 0.42
RFC4-208ENST00000447345 ACIN1Q9UKV3 1341 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms