RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 DUOX2Q9NRD8 1548 aa16■□□□□ 0.15
GNE-203ENST00000447283 MPHOSPH9Q99550 1183 aa16■□□□□ 0.15
GNE-203ENST00000447283 PPRC1Q5VV67 1664 aaKnown RBP16■□□□□ 0.15
GNE-203ENST00000447283 MLH3Q9UHC1 1453 aa15.99■□□□□ 0.15
GNE-203ENST00000447283 KDM5CP41229 1560 aa15.98■□□□□ 0.15
GNE-203ENST00000447283 INO80Q9ULG1 1556 aaPredicted RBP15.98■□□□□ 0.15
GNE-203ENST00000447283 ERBINQ96RT1 1412 aa15.98■□□□□ 0.15
GNE-203ENST00000447283 NEFLP07196 543 aa15.97■□□□□ 0.15
GNE-203ENST00000447283 SLC4A1APQ9BWU0 796 aaKnown RBP15.97■□□□□ 0.15
GNE-203ENST00000447283 NUP155O75694 1391 aa15.96■□□□□ 0.15
GNE-203ENST00000447283 BCANQ96GW7 911 aa15.96■□□□□ 0.15
GNE-203ENST00000447283 DHX29Q7Z478 1369 aaKnown RBP15.96■□□□□ 0.15
GNE-203ENST00000447283 KIDINS220Q9ULH0 1771 aa15.94■□□□□ 0.14
GNE-203ENST00000447283 RICTORQ6R327 1708 aa15.93■□□□□ 0.14
GNE-203ENST00000447283 HECW2Q9P2P5 1572 aa15.93■□□□□ 0.14
GNE-203ENST00000447283 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.93■□□□□ 0.142e-6■□□□□ 8.5
GNE-203ENST00000447283 ANP32EQ9BTT0 268 aa15.92■□□□□ 0.14
GNE-203ENST00000447283 KIF3BO15066 747 aa15.91■□□□□ 0.14
GNE-203ENST00000447283 A2MP01023 1474 aa15.91■□□□□ 0.14
GNE-203ENST00000447283 PZPP20742 1482 aa15.91■□□□□ 0.14
GNE-203ENST00000447283 COL17A1Q9UMD9 1497 aaPredicted RBP15.9■□□□□ 0.14
GNE-203ENST00000447283 FRMPD1Q5SYB0 1578 aa15.89■□□□□ 0.13
GNE-203ENST00000447283 PKD2Q13563 968 aa15.89■□□□□ 0.13
GNE-203ENST00000447283 MAGI2Q86UL8 1455 aa15.89■□□□□ 0.13
GNE-203ENST00000447283 FOXD1Q16676 465 aa15.89■□□□□ 0.13
GNE-203ENST00000447283 KDM5DQ9BY66 1539 aa15.88■□□□□ 0.13
GNE-203ENST00000447283 ZMYM4Q5VZL5 1548 aa15.87■□□□□ 0.13
GNE-203ENST00000447283 YEATS2Q9ULM3 1422 aa15.87■□□□□ 0.13
GNE-203ENST00000447283 UNC13BO14795 1591 aa15.86■□□□□ 0.13
GNE-203ENST00000447283 ABCA6Q8N139 1617 aa15.85■□□□□ 0.13
GNE-203ENST00000447283 WASHC2AQ641Q2 1341 aa15.85■□□□□ 0.13
GNE-203ENST00000447283 FAM135AQ9P2D6 1515 aa15.85■□□□□ 0.13
GNE-203ENST00000447283 DIP2CQ9Y2E4 1556 aa15.85■□□□□ 0.13
GNE-203ENST00000447283 EIF2AK4Q9P2K8 1649 aaKnown RBP15.84■□□□□ 0.13
GNE-203ENST00000447283 KANK1Q14678 1352 aa15.84■□□□□ 0.13
GNE-203ENST00000447283 ANKRD30BQ9BXX2 1392 aa15.84■□□□□ 0.13
GNE-203ENST00000447283 HSPA5P11021 654 aaKnown RBP15.84■□□□□ 0.13
GNE-203ENST00000447283 ATP10AO60312 1499 aa15.82■□□□□ 0.12
GNE-203ENST00000447283 GGT6Q6P531 493 aa15.82■□□□□ 0.12
GNE-203ENST00000447283 RBM19Q9Y4C8 960 aaKnown RBP15.82■□□□□ 0.12
GNE-203ENST00000447283 EIF4G2P78344 907 aaKnown RBP eCLIP15.8■□□□□ 0.12
GNE-203ENST00000447283 IQGAP3Q86VI3 1631 aa15.8■□□□□ 0.12
GNE-203ENST00000447283 CNTLNQ9NXG0 1405 aa15.8■□□□□ 0.12
GNE-203ENST00000447283 DEPDC5O75140 1603 aa15.8■□□□□ 0.12
GNE-203ENST00000447283 HNRNPUQ00839 825 aaKnown RBP eCLIP15.79■□□□□ 0.12
GNE-203ENST00000447283 PRDM15P57071 1507 aaPredicted RBP15.77■□□□□ 0.12
GNE-203ENST00000447283 WASHC2CQ9Y4E1 1318 aa15.76■□□□□ 0.11
GNE-203ENST00000447283 VWDEQ8N2E2 1590 aa15.76■□□□□ 0.11
GNE-203ENST00000447283 POLR1AO95602 1720 aaPredicted RBP15.76■□□□□ 0.11
GNE-203ENST00000447283 BCORL1Q5H9F3 1711 aa15.76■□□□□ 0.11
GNE-203ENST00000447283 RPRD2Q5VT52 1461 aaKnown RBP15.75■□□□□ 0.11
GNE-203ENST00000447283 MROH1Q8NDA8 1641 aa15.75■□□□□ 0.11
GNE-203ENST00000447283 RNF17Q9BXT8 1623 aaKnown RBP15.75■□□□□ 0.11
GNE-203ENST00000447283 L3MBTL2Q969R5 705 aa15.75■□□□□ 0.11
GNE-203ENST00000447283 ERICH6BQ5W0A0 696 aa15.75■□□□□ 0.11
GNE-203ENST00000447283 REREQ9P2R6 1566 aa15.75■□□□□ 0.11
GNE-203ENST00000447283 CCDC7Q96M83 1385 aa15.74■□□□□ 0.11
GNE-203ENST00000447283 ARHGEF40Q8TER5 1519 aa15.73■□□□□ 0.11
GNE-203ENST00000447283 AGLP35573 1532 aa15.72■□□□□ 0.11
GNE-203ENST00000447283 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
GNE-203ENST00000447283 LMTK2Q8IWU2 1503 aa15.71■□□□□ 0.11
GNE-203ENST00000447283 TET3O43151 1660 aa15.7■□□□□ 0.1
GNE-203ENST00000447283 PRKRIP1Q9H875 184 aaPredicted RBP15.7■□□□□ 0.1
GNE-203ENST00000447283 SPATA31E1Q6ZUB1 1445 aa15.7■□□□□ 0.1
GNE-203ENST00000447283 PLA2R1Q13018 1463 aa15.7■□□□□ 0.1
GNE-203ENST00000447283 CCDC144AA2RUR9 1427 aa15.69■□□□□ 0.1
GNE-203ENST00000447283 ARID4BQ4LE39 1312 aaPredicted RBP15.69■□□□□ 0.1
GNE-203ENST00000447283 C11orf95C9JLR9 678 aaPredicted RBP15.69■□□□□ 0.1
GNE-203ENST00000447283 E9PCH4 1651 aa15.68■□□□□ 0.1
GNE-203ENST00000447283 MLECQ14165 292 aa15.68■□□□□ 0.1
GNE-203ENST00000447283 ABCC3O15438 1527 aa15.67■□□□□ 0.1
GNE-203ENST00000447283 PTPRTO14522 1441 aa15.67■□□□□ 0.1
GNE-203ENST00000447283 EFCAB6Q5THR3 1501 aa15.66■□□□□ 0.1
GNE-203ENST00000447283 NBPF8Q3BBV2 869 aa15.66■□□□□ 0.1
GNE-203ENST00000447283 CCDC184Q52MB2 194 aa15.66■□□□□ 0.1
GNE-203ENST00000447283 ZBED9Q6R2W3 1325 aa15.65■□□□□ 0.1
GNE-203ENST00000447283 FANCIQ9NVI1 1328 aa15.65■□□□□ 0.1
GNE-203ENST00000447283 CEP152O94986 1710 aa15.65■□□□□ 0.1
GNE-203ENST00000447283 NPATQ14207 1427 aa15.65■□□□□ 0.1
GNE-203ENST00000447283 ESF1Q9H501 851 aaKnown RBP15.63■□□□□ 0.09
GNE-203ENST00000447283 SIGLEC1Q9BZZ2 1709 aa15.63■□□□□ 0.09
GNE-203ENST00000447283 ARHGAP31Q2M1Z3 1444 aa15.63■□□□□ 0.09
GNE-203ENST00000447283 PPP4R2Q9NY27 417 aa15.63■□□□□ 0.09
GNE-203ENST00000447283 KIF7Q2M1P5 1343 aa15.63■□□□□ 0.09
GNE-203ENST00000447283 IRX6P78412 446 aaPredicted RBP15.62■□□□□ 0.09
GNE-203ENST00000447283 ZC3H13Q5T200 1668 aaKnown RBP15.62■□□□□ 0.09
GNE-203ENST00000447283 MRS2Q9HD23 443 aa15.62■□□□□ 0.09
GNE-203ENST00000447283 TRPM2O94759 1503 aa15.61■□□□□ 0.09
GNE-203ENST00000447283 RGL3Q3MIN7 710 aa15.6■□□□□ 0.09
GNE-203ENST00000447283 CAMSAP1Q5T5Y3 1602 aa15.6■□□□□ 0.09
GNE-203ENST00000447283 SPHKAPQ2M3C7 1700 aa15.6■□□□□ 0.09
GNE-203ENST00000447283 MSH5O43196 834 aa15.59■□□□□ 0.09
GNE-203ENST00000447283 FAM9BQ8IZU0 186 aa15.58■□□□□ 0.08
GNE-203ENST00000447283 DCAF11Q8TEB1 546 aa15.58■□□□□ 0.08
GNE-203ENST00000447283 NOS1P29475 1434 aa15.57■□□□□ 0.08
GNE-203ENST00000447283 KDM2AQ9Y2K7 1162 aa15.56■□□□□ 0.08
GNE-203ENST00000447283 FBXO31Q5XUX0 539 aaPredicted RBP15.55■□□□□ 0.08
GNE-203ENST00000447283 ZMYM3Q14202 1370 aa15.55■□□□□ 0.08
GNE-203ENST00000447283 SLC52A1Q9NWF4 448 aa15.55■□□□□ 0.08
GNE-203ENST00000447283 CFAP65Q6ZU64 1925 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms