RNA–Protein interactions for RNA: ENST00000447009.1

APTR-205, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 2 BASIC

Gene APTR, Length 902 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-205ENST00000447009 RSPH4AQ5TD94 716 aa32.58■■■□□ 2.81
APTR-205ENST00000447009 DNMT1P26358 1616 aaKnown RBP32.58■■■□□ 2.81
APTR-205ENST00000447009 ZNF335Q9H4Z2 1342 aaPredicted RBP32.57■■■□□ 2.8
APTR-205ENST00000447009 PKD2Q13563 968 aa32.57■■■□□ 2.8
APTR-205ENST00000447009 FAM135AQ9P2D6 1515 aa32.55■■■□□ 2.8
APTR-205ENST00000447009 TNRQ92752 1358 aa32.54■■■□□ 2.8
APTR-205ENST00000447009 PZPP20742 1482 aa32.54■■■□□ 2.8
APTR-205ENST00000447009 FBXO31Q5XUX0 539 aaPredicted RBP32.53■■■□□ 2.8
APTR-205ENST00000447009 TSPY4P0CV99 314 aa32.51■■■□□ 2.79
APTR-205ENST00000447009 TSPY10P0CW01 314 aa32.51■■■□□ 2.79
APTR-205ENST00000447009 WASHC2CQ9Y4E1 1318 aa32.51■■■□□ 2.79
APTR-205ENST00000447009 POLR1AO95602 1720 aaPredicted RBP32.5■■■□□ 2.79
APTR-205ENST00000447009 MAST1Q9Y2H9 1570 aa32.48■■■□□ 2.79
APTR-205ENST00000447009 KANK4Q5T7N3 995 aaPredicted RBP32.47■■■□□ 2.79
APTR-205ENST00000447009 DISP3Q9P2K9 1392 aa32.46■■■□□ 2.79
APTR-205ENST00000447009 RNF17Q9BXT8 1623 aaKnown RBP32.45■■■□□ 2.79
APTR-205ENST00000447009 MAP3K1Q13233 1512 aa32.44■■■□□ 2.78
APTR-205ENST00000447009 NEURL4Q96JN8 1562 aa32.43■■■□□ 2.78
APTR-205ENST00000447009 MYOM3Q5VTT5 1437 aa32.42■■■□□ 2.78
APTR-205ENST00000447009 EIF2AK4Q9P2K8 1649 aaKnown RBP32.39■■■□□ 2.78
APTR-205ENST00000447009 ZC3H13Q5T200 1668 aaKnown RBP32.39■■■□□ 2.78
APTR-205ENST00000447009 SPATA31D1Q6ZQQ2 1576 aa32.38■■■□□ 2.77
APTR-205ENST00000447009 ABCC3O15438 1527 aa32.38■■■□□ 2.77
APTR-205ENST00000447009 MIA2Q96PC5 1412 aa32.37■■■□□ 2.77
APTR-205ENST00000447009 UBAP1LF5GYI3 381 aa32.37■■■□□ 2.77
APTR-205ENST00000447009 NLRP1Q9C000 1473 aa32.35■■■□□ 2.77
APTR-205ENST00000447009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.35■■■□□ 2.77
APTR-205ENST00000447009 UGGT1Q9NYU2 1555 aa32.35■■■□□ 2.77
APTR-205ENST00000447009 CEP152O94986 1710 aa32.34■■■□□ 2.77
APTR-205ENST00000447009 MROH1Q8NDA8 1641 aa32.33■■■□□ 2.77
APTR-205ENST00000447009 ILDR2Q71H61 639 aa32.29■■■□□ 2.76
APTR-205ENST00000447009 CROCC2H7BZ55 1655 aa32.29■■■□□ 2.76
APTR-205ENST00000447009 DUOX2Q9NRD8 1548 aa32.28■■■□□ 2.76
APTR-205ENST00000447009 ANKLE2Q86XL3 938 aa32.28■■■□□ 2.76
APTR-205ENST00000447009 THEMISQ8N1K5 641 aaPredicted RBP32.28■■■□□ 2.76
APTR-205ENST00000447009 CFAP65Q6ZU64 1925 aaKnown RBP32.27■■■□□ 2.76
APTR-205ENST00000447009 ERVK-7P63135 1459 aa32.27■■■□□ 2.76
APTR-205ENST00000447009 PTPN23Q9H3S7 1636 aa32.26■■■□□ 2.75
APTR-205ENST00000447009 CPS1P31327 1500 aa32.26■■■□□ 2.75
APTR-205ENST00000447009 SHANK2Q9UPX8 1470 aa32.25■■■□□ 2.75
APTR-205ENST00000447009 DEPDC5O75140 1603 aa32.25■■■□□ 2.75
APTR-205ENST00000447009 NPHP4O75161 1426 aaPredicted RBP32.24■■■□□ 2.75
APTR-205ENST00000447009 VWDEQ8N2E2 1590 aa32.23■■■□□ 2.75
APTR-205ENST00000447009 IQGAP1P46940 1657 aa32.21■■■□□ 2.75
APTR-205ENST00000447009 KIF15Q9NS87 1388 aa32.2■■■□□ 2.75
APTR-205ENST00000447009 ABCC5O15440 1437 aa32.2■■■□□ 2.75
APTR-205ENST00000447009 APLP2Q06481 763 aa32.2■■■□□ 2.75
APTR-205ENST00000447009 MED14O60244 1454 aa32.2■■■□□ 2.75
APTR-205ENST00000447009 PRDM15P57071 1507 aaPredicted RBP32.17■■■□□ 2.74
APTR-205ENST00000447009 SCAF1Q9H7N4 1312 aaKnown RBP32.17■■■□□ 2.74
APTR-205ENST00000447009 UBR1Q8IWV7 1749 aa32.16■■■□□ 2.74
APTR-205ENST00000447009 RRP7BPQ9NSQ0 103 aa32.15■■■□□ 2.74
APTR-205ENST00000447009 ERBINQ96RT1 1412 aa32.15■■■□□ 2.74
APTR-205ENST00000447009 DAPK1P53355 1430 aa32.14■■■□□ 2.74
APTR-205ENST00000447009 PIP4K2BP78356 416 aa32.13■■■□□ 2.73
APTR-205ENST00000447009 FGD6Q6ZV73 1430 aa32.12■■■□□ 2.73
APTR-205ENST00000447009 STRCP1A6NGW2 1772 aa32.1■■■□□ 2.73
APTR-205ENST00000447009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.08■■■□□ 2.73
APTR-205ENST00000447009 TOM1O60784 492 aa32.07■■■□□ 2.72
APTR-205ENST00000447009 SOCS7O14512 581 aa32.06■■■□□ 2.72
APTR-205ENST00000447009 ARHGAP31Q2M1Z3 1444 aa32.05■■■□□ 2.72
APTR-205ENST00000447009 HSPA1LP34931 641 aa32.03■■■□□ 2.72
APTR-205ENST00000447009 CHIC2Q9UKJ5 165 aa32.03■■■□□ 2.72
APTR-205ENST00000447009 SCAF11Q99590 1463 aaKnown RBP32.03■■■□□ 2.72
APTR-205ENST00000447009 PIK3C2BO00750 1634 aa32.01■■■□□ 2.72
APTR-205ENST00000447009 SYNMO15061 1565 aa32.01■■■□□ 2.71
APTR-205ENST00000447009 ALKQ9UM73 1620 aa32■■■□□ 2.71
APTR-205ENST00000447009 KANK1Q14678 1352 aa32■■■□□ 2.71
APTR-205ENST00000447009 ANKRD30AQ9BXX3 1397 aa31.99■■■□□ 2.71
APTR-205ENST00000447009 SLIT1O75093 1534 aa31.99■■■□□ 2.71
APTR-205ENST00000447009 LRRC7Q96NW7 1537 aa31.99■■■□□ 2.71
APTR-205ENST00000447009 ARHGAP23Q9P227 1491 aa31.98■■■□□ 2.71
APTR-205ENST00000447009 LTKP29376 864 aa31.95■■■□□ 2.71
APTR-205ENST00000447009 TXNDC2Q86VQ3 553 aa31.94■■■□□ 2.7
APTR-205ENST00000447009 MED1Q15648 1581 aaPredicted RBP31.94■■■□□ 2.7
APTR-205ENST00000447009 LMTK2Q8IWU2 1503 aa31.93■■■□□ 2.7
APTR-205ENST00000447009 STAG3Q9UJ98 1225 aa31.89■■■□□ 2.7
APTR-205ENST00000447009 EID1Q9Y6B2 187 aa31.88■■■□□ 2.69
APTR-205ENST00000447009 ADGRL2O95490 1459 aa31.88■■■□□ 2.69
APTR-205ENST00000447009 EFCAB6Q5THR3 1501 aa31.88■■■□□ 2.69
APTR-205ENST00000447009 FAM50AQ14320 339 aaKnown RBP31.87■■■□□ 2.69
APTR-205ENST00000447009 SENP3Q9H4L4 574 aaPredicted RBP31.87■■■□□ 2.69
APTR-205ENST00000447009 TMEM2Q9UHN6 1383 aa31.86■■■□□ 2.69
APTR-205ENST00000447009 KDM5AP29375 1690 aaKnown RBP31.86■■■□□ 2.69
APTR-205ENST00000447009 XIRP1Q702N8 1843 aaKnown RBP31.84■■■□□ 2.69
APTR-205ENST00000447009 IDI1Q13907 227 aa31.82■■■□□ 2.68
APTR-205ENST00000447009 ADGRB3O60242 1522 aa31.8■■■□□ 2.68
APTR-205ENST00000447009 NOS1P29475 1434 aa31.79■■■□□ 2.68
APTR-205ENST00000447009 ANKRD50Q9ULJ7 1429 aa31.76■■■□□ 2.68
APTR-205ENST00000447009 TET3O43151 1660 aa31.72■■■□□ 2.67
APTR-205ENST00000447009 MYO5BQ9ULV0 1848 aa31.71■■■□□ 2.67
APTR-205ENST00000447009 SLC26A8Q96RN1 970 aa31.69■■■□□ 2.66
APTR-205ENST00000447009 RPRD2Q5VT52 1461 aaKnown RBP31.69■■■□□ 2.66
APTR-205ENST00000447009 GCC2Q8IWJ2 1684 aa31.68■■■□□ 2.66
APTR-205ENST00000447009 PHF23Q9BUL5 403 aaPredicted RBP31.67■■■□□ 2.66
APTR-205ENST00000447009 UNC13BO14795 1591 aa31.66■■■□□ 2.66
APTR-205ENST00000447009 SLC52A1Q9NWF4 448 aa31.66■■■□□ 2.66
APTR-205ENST00000447009 TMEM94Q12767 1356 aa31.65■■■□□ 2.66
APTR-205ENST00000447009 BCANQ96GW7 911 aa31.63■■■□□ 2.65
APTR-205ENST00000447009 KCNA6P17658 529 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms