RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 TSPY10P0CW01 314 aa18.9■□□□□ 0.62
DDX56-206ENST00000446987 DHX29Q7Z478 1369 aaKnown RBP18.9■□□□□ 0.62
DDX56-206ENST00000446987 RIMS1Q86UR5 1692 aaKnown RBP18.9■□□□□ 0.62
DDX56-206ENST00000446987 EIF2AK4Q9P2K8 1649 aaKnown RBP18.9■□□□□ 0.62
DDX56-206ENST00000446987 NCOA1Q15788 1441 aa18.89■□□□□ 0.61
DDX56-206ENST00000446987 DUOX2Q9NRD8 1548 aa18.89■□□□□ 0.61
DDX56-206ENST00000446987 ARID4BQ4LE39 1312 aaPredicted RBP18.88■□□□□ 0.61
DDX56-206ENST00000446987 SUPT16HQ9Y5B9 1047 aaKnown RBP18.88■□□□□ 0.61
DDX56-206ENST00000446987 MROH1Q8NDA8 1641 aa18.88■□□□□ 0.61
DDX56-206ENST00000446987 RNF17Q9BXT8 1623 aaKnown RBP18.88■□□□□ 0.61
DDX56-206ENST00000446987 KIF15Q9NS87 1388 aa18.88■□□□□ 0.61
DDX56-206ENST00000446987 CHIC2Q9UKJ5 165 aa18.85■□□□□ 0.61
DDX56-206ENST00000446987 ANKRD30AQ9BXX3 1397 aa18.83■□□□□ 0.61
DDX56-206ENST00000446987 DEPDC5O75140 1603 aa18.83■□□□□ 0.61
DDX56-206ENST00000446987 ERBINQ96RT1 1412 aa18.83■□□□□ 0.61
DDX56-206ENST00000446987 MLECQ14165 292 aa18.83■□□□□ 0.6
DDX56-206ENST00000446987 YTHDC1Q96MU7 727 aaKnown RBP18.83■□□□□ 0.6
DDX56-206ENST00000446987 PTPRMP28827 1452 aa18.83■□□□□ 0.6
DDX56-206ENST00000446987 ROCK1Q13464 1354 aa18.82■□□□□ 0.6
DDX56-206ENST00000446987 CLTCQ00610 1675 aaKnown RBP18.81■□□□□ 0.6
DDX56-206ENST00000446987 MIER1Q8N108 512 aa18.81■□□□□ 0.6
DDX56-206ENST00000446987 RRP7BPQ9NSQ0 103 aa18.81■□□□□ 0.6
DDX56-206ENST00000446987 MROH2AA6NES4 1674 aa18.8■□□□□ 0.6
DDX56-206ENST00000446987 PRDM15P57071 1507 aaPredicted RBP18.8■□□□□ 0.6
DDX56-206ENST00000446987 C3P01024 1663 aa18.79■□□□□ 0.6
DDX56-206ENST00000446987 GCC2Q8IWJ2 1684 aa18.79■□□□□ 0.6
DDX56-206ENST00000446987 KIF3BO15066 747 aa18.77■□□□□ 0.6
DDX56-206ENST00000446987 ITGAEP38570 1179 aa18.77■□□□□ 0.6
DDX56-206ENST00000446987 FAM135AQ9P2D6 1515 aa18.77■□□□□ 0.59
DDX56-206ENST00000446987 CEP152O94986 1710 aa18.76■□□□□ 0.59
DDX56-206ENST00000446987 KDM5DQ9BY66 1539 aa18.76■□□□□ 0.59
DDX56-206ENST00000446987 VWDEQ8N2E2 1590 aa18.75■□□□□ 0.59
DDX56-206ENST00000446987 ANKRD50Q9ULJ7 1429 aa18.75■□□□□ 0.59
DDX56-206ENST00000446987 ZC3H13Q5T200 1668 aaKnown RBP18.75■□□□□ 0.59
DDX56-206ENST00000446987 ABCC3O15438 1527 aa18.74■□□□□ 0.59
DDX56-206ENST00000446987 UNC13BO14795 1591 aa18.74■□□□□ 0.59
DDX56-206ENST00000446987 NAIPQ13075 1403 aa18.73■□□□□ 0.59
DDX56-206ENST00000446987 GGT6Q6P531 493 aa18.73■□□□□ 0.59
DDX56-206ENST00000446987 CNTLNQ9NXG0 1405 aa18.73■□□□□ 0.59
DDX56-206ENST00000446987 HFM1A2PYH4 1435 aa18.7■□□□□ 0.58
DDX56-206ENST00000446987 CAMSAP1Q5T5Y3 1602 aa18.7■□□□□ 0.58
DDX56-206ENST00000446987 PPP6R1Q9UPN7 881 aa18.67■□□□□ 0.58
DDX56-206ENST00000446987 LMTK2Q8IWU2 1503 aa18.67■□□□□ 0.58
DDX56-206ENST00000446987 CEBPAP49715 358 aaPredicted RBP18.67■□□□□ 0.58
DDX56-206ENST00000446987 ZMYM3Q14202 1370 aa18.66■□□□□ 0.58
DDX56-206ENST00000446987 IQGAP3Q86VI3 1631 aa18.65■□□□□ 0.58
DDX56-206ENST00000446987 PZPP20742 1482 aa18.64■□□□□ 0.58
DDX56-206ENST00000446987 EFCAB6Q5THR3 1501 aa18.63■□□□□ 0.57
DDX56-206ENST00000446987 PREX1Q8TCU6 1659 aa18.63■□□□□ 0.57
DDX56-206ENST00000446987 TET3O43151 1660 aa18.62■□□□□ 0.57
DDX56-206ENST00000446987 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
DDX56-206ENST00000446987 LMTK3Q96Q04 1460 aa18.61■□□□□ 0.57
DDX56-206ENST00000446987 WASHC2CQ9Y4E1 1318 aa18.61■□□□□ 0.57
DDX56-206ENST00000446987 NPATQ14207 1427 aa18.61■□□□□ 0.57
DDX56-206ENST00000446987 MYO3AQ8NEV4 1616 aa18.6■□□□□ 0.57
DDX56-206ENST00000446987 SPATA31D1Q6ZQQ2 1576 aa18.6■□□□□ 0.57
DDX56-206ENST00000446987 ARHGAP31Q2M1Z3 1444 aa18.59■□□□□ 0.57
DDX56-206ENST00000446987 PLPPR3Q6T4P5 718 aa18.59■□□□□ 0.57
DDX56-206ENST00000446987 ESF1Q9H501 851 aaKnown RBP18.59■□□□□ 0.57
DDX56-206ENST00000446987 SETD1BQ9UPS6 1966 aaKnown RBP18.59■□□□□ 0.57
DDX56-206ENST00000446987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.58■□□□□ 0.562e-7■■□□□ 11.7
DDX56-206ENST00000446987 E9PCH4 1651 aa18.58■□□□□ 0.56
DDX56-206ENST00000446987 ZNF142P52746 1687 aaPredicted RBP18.58■□□□□ 0.56
DDX56-206ENST00000446987 ERVK-7P63135 1459 aa18.57■□□□□ 0.56
DDX56-206ENST00000446987 CFAP65Q6ZU64 1925 aaKnown RBP18.57■□□□□ 0.56
DDX56-206ENST00000446987 KANK1Q14678 1352 aa18.56■□□□□ 0.56
DDX56-206ENST00000446987 FBXO31Q5XUX0 539 aaPredicted RBP18.55■□□□□ 0.56
DDX56-206ENST00000446987 SYNMO15061 1565 aa18.54■□□□□ 0.56
DDX56-206ENST00000446987 NUP155O75694 1391 aa18.52■□□□□ 0.56
DDX56-206ENST00000446987 SETD5Q9C0A6 1442 aa18.51■□□□□ 0.55
DDX56-206ENST00000446987 CEP170BQ9Y4F5 1589 aaPredicted RBP18.51■□□□□ 0.55
DDX56-206ENST00000446987 RPRD2Q5VT52 1461 aaKnown RBP18.5■□□□□ 0.55
DDX56-206ENST00000446987 NOS1P29475 1434 aa18.5■□□□□ 0.55
DDX56-206ENST00000446987 UHRF1BP1Q6BDS2 1440 aa18.5■□□□□ 0.55
DDX56-206ENST00000446987 TNRQ92752 1358 aa18.5■□□□□ 0.55
DDX56-206ENST00000446987 RAB3GAP2Q9H2M9 1393 aa18.49■□□□□ 0.55
DDX56-206ENST00000446987 PIK3C2BO00750 1634 aa18.47■□□□□ 0.55
DDX56-206ENST00000446987 SPHKAPQ2M3C7 1700 aa18.46■□□□□ 0.55
DDX56-206ENST00000446987 A2ML1A8K2U0 1454 aa18.46■□□□□ 0.55
DDX56-206ENST00000446987 NLRP1Q9C000 1473 aa18.45■□□□□ 0.54
DDX56-206ENST00000446987 UBR1Q8IWV7 1749 aa18.45■□□□□ 0.54
DDX56-206ENST00000446987 RBM19Q9Y4C8 960 aaKnown RBP18.44■□□□□ 0.54
DDX56-206ENST00000446987 UGGT1Q9NYU2 1555 aa18.44■□□□□ 0.54
DDX56-206ENST00000446987 STRCQ7RTU9 1775 aa18.43■□□□□ 0.54
DDX56-206ENST00000446987 HSPA2P54652 639 aa18.42■□□□□ 0.54
DDX56-206ENST00000446987 KDM5AP29375 1690 aaKnown RBP18.41■□□□□ 0.54
DDX56-206ENST00000446987 PTPRTO14522 1441 aa18.4■□□□□ 0.54
DDX56-206ENST00000446987 ERICH6BQ5W0A0 696 aa18.4■□□□□ 0.54
DDX56-206ENST00000446987 FANCIQ9NVI1 1328 aa18.4■□□□□ 0.54
DDX56-206ENST00000446987 PLA2R1Q13018 1463 aa18.4■□□□□ 0.54
DDX56-206ENST00000446987 MYO5BQ9ULV0 1848 aa18.39■□□□□ 0.54
DDX56-206ENST00000446987 TRPM2O94759 1503 aa18.39■□□□□ 0.53
DDX56-206ENST00000446987 CLTCL1P53675 1640 aa18.38■□□□□ 0.53
DDX56-206ENST00000446987 TRIM52Q96A61 297 aa18.38■□□□□ 0.53
DDX56-206ENST00000446987 ADGRB3O60242 1522 aa18.37■□□□□ 0.53
DDX56-206ENST00000446987 TMEM131LA2VDJ0 1609 aa18.36■□□□□ 0.53
DDX56-206ENST00000446987 POLR1AO95602 1720 aaPredicted RBP18.35■□□□□ 0.53
DDX56-206ENST00000446987 NEURL4Q96JN8 1562 aa18.35■□□□□ 0.53
DDX56-206ENST00000446987 PKD2Q13563 968 aa18.34■□□□□ 0.53
DDX56-206ENST00000446987 SLC4A1APQ9BWU0 796 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms