RNA–Protein interactions for RNA: ENST00000446593.1

LINC01880-201, Transcript of long intergenic non-protein coding RNA 1880, humanhuman

TSL 4 BASIC

Gene LINC01880, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01880-201ENST00000446593 GGT6Q6P531 493 aa9.58□□□□□ -0.88
LINC01880-201ENST00000446593 PLA2R1Q13018 1463 aa9.58□□□□□ -0.88
LINC01880-201ENST00000446593 C3P01024 1663 aa9.58□□□□□ -0.88
LINC01880-201ENST00000446593 MYO5CQ9NQX4 1742 aa9.56□□□□□ -0.88
LINC01880-201ENST00000446593 HNRNPMP52272 730 aaKnown RBP eCLIP9.55□□□□□ -0.88
LINC01880-201ENST00000446593 TCOF1Q13428 1488 aaKnown RBP9.54□□□□□ -0.88
LINC01880-201ENST00000446593 ABCA6Q8N139 1617 aa9.54□□□□□ -0.88
LINC01880-201ENST00000446593 C19orf67A6NJJ6 358 aa9.54□□□□□ -0.88
LINC01880-201ENST00000446593 ANKLE2Q86XL3 938 aa9.54□□□□□ -0.88
LINC01880-201ENST00000446593 ARHGAP35Q9NRY4 1499 aa9.53□□□□□ -0.88
LINC01880-201ENST00000446593 CFDP1Q9UEE9 299 aaPredicted RBP9.53□□□□□ -0.88
LINC01880-201ENST00000446593 PTPRKQ15262 1439 aa9.53□□□□□ -0.88
LINC01880-201ENST00000446593 ABCC1P33527 1531 aa9.52□□□□□ -0.88
LINC01880-201ENST00000446593 THEMISQ8N1K5 641 aaPredicted RBP9.52□□□□□ -0.89
LINC01880-201ENST00000446593 A2MP01023 1474 aa9.5□□□□□ -0.89
LINC01880-201ENST00000446593 CCDC18Q5T9S5 1454 aa9.5□□□□□ -0.89
LINC01880-201ENST00000446593 CPS1P31327 1500 aa9.5□□□□□ -0.89
LINC01880-201ENST00000446593 MED1Q15648 1581 aaPredicted RBP9.5□□□□□ -0.89
LINC01880-201ENST00000446593 KIAA1107Q9UPP5 1409 aa9.49□□□□□ -0.89
LINC01880-201ENST00000446593 A2ML1A8K2U0 1454 aa9.49□□□□□ -0.89
LINC01880-201ENST00000446593 SHANK2Q9UPX8 1470 aa9.49□□□□□ -0.89
LINC01880-201ENST00000446593 SAMD9LQ8IVG5 1584 aa9.49□□□□□ -0.89
LINC01880-201ENST00000446593 CEP170BQ9Y4F5 1589 aaPredicted RBP9.49□□□□□ -0.89
LINC01880-201ENST00000446593 MROH2AA6NES4 1674 aa9.48□□□□□ -0.89
LINC01880-201ENST00000446593 CASKIN1Q8WXD9 1431 aa9.48□□□□□ -0.89
LINC01880-201ENST00000446593 PLEKHH2Q8IVE3 1493 aa9.48□□□□□ -0.89
LINC01880-201ENST00000446593 KIDINS220Q9ULH0 1771 aa9.48□□□□□ -0.89
LINC01880-201ENST00000446593 FBXO31Q5XUX0 539 aaPredicted RBP9.48□□□□□ -0.89
LINC01880-201ENST00000446593 PRKAR2AP13861 404 aaKnown RBP9.47□□□□□ -0.89
LINC01880-201ENST00000446593 WASHC2CQ9Y4E1 1318 aa9.47□□□□□ -0.89
LINC01880-201ENST00000446593 CDC42BPBQ9Y5S2 1711 aa9.47□□□□□ -0.89
LINC01880-201ENST00000446593 CCNB3Q8WWL7 1395 aa9.47□□□□□ -0.89
LINC01880-201ENST00000446593 TNRQ92752 1358 aa9.47□□□□□ -0.89
LINC01880-201ENST00000446593 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.47□□□□□ -0.89
LINC01880-201ENST00000446593 GPATCH8Q9UKJ3 1502 aaKnown RBP9.46□□□□□ -0.89
LINC01880-201ENST00000446593 PREX2Q70Z35 1606 aa9.46□□□□□ -0.89
LINC01880-201ENST00000446593 KIF3BO15066 747 aa9.46□□□□□ -0.9
LINC01880-201ENST00000446593 DHX29Q7Z478 1369 aaKnown RBP9.45□□□□□ -0.9
LINC01880-201ENST00000446593 ATP7AQ04656 1500 aa9.45□□□□□ -0.9
LINC01880-201ENST00000446593 SYCP2Q9BX26 1530 aa9.45□□□□□ -0.9
LINC01880-201ENST00000446593 MYO3AQ8NEV4 1616 aa9.45□□□□□ -0.9
LINC01880-201ENST00000446593 ITSN2Q9NZM3 1697 aa9.45□□□□□ -0.9
LINC01880-201ENST00000446593 ZNF142P52746 1687 aaPredicted RBP9.44□□□□□ -0.9
LINC01880-201ENST00000446593 NPHP4O75161 1426 aaPredicted RBP9.43□□□□□ -0.9
LINC01880-201ENST00000446593 MIA2Q96PC5 1412 aa9.43□□□□□ -0.9
LINC01880-201ENST00000446593 CLTCQ00610 1675 aaKnown RBP9.42□□□□□ -0.9
LINC01880-201ENST00000446593 DNMT1P26358 1616 aaKnown RBP9.42□□□□□ -0.9
LINC01880-201ENST00000446593 FAM135AQ9P2D6 1515 aa9.42□□□□□ -0.9
LINC01880-201ENST00000446593 RTEL1-TNFRSF6BF6WH68 1400 aa9.42□□□□□ -0.9
LINC01880-201ENST00000446593 MYCNP04198 464 aaPredicted RBP9.42□□□□□ -0.9
LINC01880-201ENST00000446593 RSPH4AQ5TD94 716 aa9.42□□□□□ -0.9
LINC01880-201ENST00000446593 RGS17Q9UGC6 210 aaPredicted RBP9.42□□□□□ -0.9
LINC01880-201ENST00000446593 SUPT6HQ7KZ85 1726 aaKnown RBP9.42□□□□□ -0.9
LINC01880-201ENST00000446593 PLXNC1O60486 1568 aa9.41□□□□□ -0.9
LINC01880-201ENST00000446593 MTUS2Q5JR59 1369 aa9.41□□□□□ -0.9
LINC01880-201ENST00000446593 ZNF644Q9H582 1327 aaPredicted RBP9.41□□□□□ -0.9
LINC01880-201ENST00000446593 MED14O60244 1454 aa9.4□□□□□ -0.9
LINC01880-201ENST00000446593 NLRP1Q9C000 1473 aa9.4□□□□□ -0.9
LINC01880-201ENST00000446593 PZPP20742 1482 aa9.4□□□□□ -0.91
LINC01880-201ENST00000446593 FYCO1Q9BQS8 1478 aa9.4□□□□□ -0.91
LINC01880-201ENST00000446593 TSPY4P0CV99 314 aa9.39□□□□□ -0.91
LINC01880-201ENST00000446593 TSPY10P0CW01 314 aa9.39□□□□□ -0.91
LINC01880-201ENST00000446593 UGGT1Q9NYU2 1555 aa9.38□□□□□ -0.91
LINC01880-201ENST00000446593 INO80Q9ULG1 1556 aaPredicted RBP9.38□□□□□ -0.91
LINC01880-201ENST00000446593 VWDEQ8N2E2 1590 aa9.37□□□□□ -0.91
LINC01880-201ENST00000446593 NEURL4Q96JN8 1562 aa9.37□□□□□ -0.91
LINC01880-201ENST00000446593 LRRC7Q96NW7 1537 aa9.37□□□□□ -0.91
LINC01880-201ENST00000446593 CDC42BPAQ5VT25 1732 aa9.37□□□□□ -0.91
LINC01880-201ENST00000446593 MBD5Q9P267 1494 aa9.37□□□□□ -0.91
LINC01880-201ENST00000446593 POTEAQ6S8J7 498 aa9.37□□□□□ -0.91
LINC01880-201ENST00000446593 POTEIP0CG38 1075 aa9.36□□□□□ -0.91
LINC01880-201ENST00000446593 TXNDC2Q86VQ3 553 aa9.36□□□□□ -0.91
LINC01880-201ENST00000446593 EID1Q9Y6B2 187 aa9.36□□□□□ -0.91
LINC01880-201ENST00000446593 KDM5DQ9BY66 1539 aa9.36□□□□□ -0.91
LINC01880-201ENST00000446593 LRRIQ1Q96JM4 1722 aa9.35□□□□□ -0.91
LINC01880-201ENST00000446593 ALKQ9UM73 1620 aa9.34□□□□□ -0.91
LINC01880-201ENST00000446593 FAM135BQ49AJ0 1406 aa9.34□□□□□ -0.91
LINC01880-201ENST00000446593 ADGBQ8N7X0 1667 aa9.34□□□□□ -0.91
LINC01880-201ENST00000446593 DEPDC5O75140 1603 aa9.34□□□□□ -0.91
LINC01880-201ENST00000446593 POTEMA6NI47 508 aa9.33□□□□□ -0.92
LINC01880-201ENST00000446593 LTKP29376 864 aa9.33□□□□□ -0.92
LINC01880-201ENST00000446593 STAG3Q9UJ98 1225 aa9.32□□□□□ -0.92
LINC01880-201ENST00000446593 CCDC141Q6ZP82 1450 aa9.32□□□□□ -0.92
LINC01880-201ENST00000446593 POLR1AO95602 1720 aaPredicted RBP9.31□□□□□ -0.92
LINC01880-201ENST00000446593 RNF17Q9BXT8 1623 aaKnown RBP9.31□□□□□ -0.92
LINC01880-201ENST00000446593 SCAF11Q99590 1463 aaKnown RBP9.3□□□□□ -0.92
LINC01880-201ENST00000446593 KCNA6P17658 529 aa9.3□□□□□ -0.92
LINC01880-201ENST00000446593 PROSER2Q86WR7 435 aaPredicted RBP9.3□□□□□ -0.92
LINC01880-201ENST00000446593 CEP162Q5TB80 1403 aa9.3□□□□□ -0.92
LINC01880-201ENST00000446593 IQGAP1P46940 1657 aa9.29□□□□□ -0.92
LINC01880-201ENST00000446593 PCDH10Q9P2E7 1040 aa9.29□□□□□ -0.92
LINC01880-201ENST00000446593 SYNMO15061 1565 aa9.29□□□□□ -0.92
LINC01880-201ENST00000446593 TMEM94Q12767 1356 aa9.28□□□□□ -0.92
LINC01880-201ENST00000446593 SLAIN2Q9P270 581 aa9.28□□□□□ -0.92
LINC01880-201ENST00000446593 ZNF772Q68DY9 489 aaPredicted RBP9.27□□□□□ -0.93
LINC01880-201ENST00000446593 POTEGQ6S5H5 508 aa9.27□□□□□ -0.93
LINC01880-201ENST00000446593 UPF1Q92900 1129 aaKnown RBP eCLIP9.27□□□□□ -0.93
LINC01880-201ENST00000446593 ERVK-7P63135 1459 aa9.27□□□□□ -0.93
LINC01880-201ENST00000446593 TIAM1Q13009 1591 aa9.26□□□□□ -0.93
LINC01880-201ENST00000446593 MEX3CQ5U5Q3 659 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms