RNA–Protein interactions for RNA: ENST00000446182.5

PTPRN-208, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 5

Gene PTPRN, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-208ENST00000446182 KIF3BO15066 747 aa16.8■□□□□ 0.28
PTPRN-208ENST00000446182 RSPH4AQ5TD94 716 aa16.78■□□□□ 0.28
PTPRN-208ENST00000446182 KDM5DQ9BY66 1539 aa16.78■□□□□ 0.28
PTPRN-208ENST00000446182 FAM135AQ9P2D6 1515 aa16.78■□□□□ 0.28
PTPRN-208ENST00000446182 DNMT1P26358 1616 aaKnown RBP16.78■□□□□ 0.28
PTPRN-208ENST00000446182 TNRQ92752 1358 aa16.77■□□□□ 0.28
PTPRN-208ENST00000446182 FBXO31Q5XUX0 539 aaPredicted RBP16.77■□□□□ 0.28
PTPRN-208ENST00000446182 PZPP20742 1482 aa16.77■□□□□ 0.28
PTPRN-208ENST00000446182 ARHGEF5Q12774 1597 aa16.75■□□□□ 0.27
PTPRN-208ENST00000446182 UBAP1LF5GYI3 381 aa16.74■□□□□ 0.27
PTPRN-208ENST00000446182 WASHC2CQ9Y4E1 1318 aa16.73■□□□□ 0.27
PTPRN-208ENST00000446182 VPS8Q8N3P4 1428 aa16.72■□□□□ 0.27
PTPRN-208ENST00000446182 LRRC9Q6ZRR7 1453 aa16.72■□□□□ 0.27
PTPRN-208ENST00000446182 NEURL4Q96JN8 1562 aa16.72■□□□□ 0.27
PTPRN-208ENST00000446182 TSPY4P0CV99 314 aa16.71■□□□□ 0.27
PTPRN-208ENST00000446182 TSPY10P0CW01 314 aa16.71■□□□□ 0.27
PTPRN-208ENST00000446182 MIA2Q96PC5 1412 aa16.7■□□□□ 0.26
PTPRN-208ENST00000446182 NLRP1Q9C000 1473 aa16.69■□□□□ 0.26
PTPRN-208ENST00000446182 POLR1AO95602 1720 aaPredicted RBP16.68■□□□□ 0.26
PTPRN-208ENST00000446182 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.68■□□□□ 0.26
PTPRN-208ENST00000446182 MAST1Q9Y2H9 1570 aa16.68■□□□□ 0.26
PTPRN-208ENST00000446182 RNF17Q9BXT8 1623 aaKnown RBP16.67■□□□□ 0.26
PTPRN-208ENST00000446182 SHANK2Q9UPX8 1470 aa16.67■□□□□ 0.26
PTPRN-208ENST00000446182 CPS1P31327 1500 aa16.66■□□□□ 0.26
PTPRN-208ENST00000446182 ANKLE2Q86XL3 938 aa16.66■□□□□ 0.26
PTPRN-208ENST00000446182 THEMISQ8N1K5 641 aaPredicted RBP16.66■□□□□ 0.26
PTPRN-208ENST00000446182 UGGT1Q9NYU2 1555 aa16.66■□□□□ 0.26
PTPRN-208ENST00000446182 ABCC3O15438 1527 aa16.65■□□□□ 0.26
PTPRN-208ENST00000446182 LOC105371045A0A1W2PR82 267 aa16.65■□□□□ 0.26
PTPRN-208ENST00000446182 KANK4Q5T7N3 995 aaPredicted RBP16.65■□□□□ 0.26
PTPRN-208ENST00000446182 MAP3K1Q13233 1512 aa16.65■□□□□ 0.26
PTPRN-208ENST00000446182 MED14O60244 1454 aa16.64■□□□□ 0.25
PTPRN-208ENST00000446182 VWDEQ8N2E2 1590 aa16.64■□□□□ 0.25
PTPRN-208ENST00000446182 NPHP4O75161 1426 aaPredicted RBP16.63■□□□□ 0.25
PTPRN-208ENST00000446182 MYOM3Q5VTT5 1437 aa16.63■□□□□ 0.25
PTPRN-208ENST00000446182 DEPDC5O75140 1603 aa16.63■□□□□ 0.25
PTPRN-208ENST00000446182 MROH1Q8NDA8 1641 aa16.62■□□□□ 0.25
PTPRN-208ENST00000446182 EIF2AK4Q9P2K8 1649 aaKnown RBP16.62■□□□□ 0.25
PTPRN-208ENST00000446182 ZC3H13Q5T200 1668 aaKnown RBP16.62■□□□□ 0.25
PTPRN-208ENST00000446182 ERVK-7P63135 1459 aa16.61■□□□□ 0.25
PTPRN-208ENST00000446182 TOM1O60784 492 aa16.6■□□□□ 0.25
PTPRN-208ENST00000446182 PIP4K2BP78356 416 aa16.59■□□□□ 0.25
PTPRN-208ENST00000446182 HSPA1LP34931 641 aa16.58■□□□□ 0.24
PTPRN-208ENST00000446182 SCAF1Q9H7N4 1312 aaKnown RBP16.58■□□□□ 0.24
PTPRN-208ENST00000446182 DUOX2Q9NRD8 1548 aa16.58■□□□□ 0.24
PTPRN-208ENST00000446182 IQGAP1P46940 1657 aa16.56■□□□□ 0.24
PTPRN-208ENST00000446182 KIF15Q9NS87 1388 aa16.55■□□□□ 0.24
PTPRN-208ENST00000446182 CEP152O94986 1710 aa16.55■□□□□ 0.24
PTPRN-208ENST00000446182 ALKQ9UM73 1620 aa16.55■□□□□ 0.24
PTPRN-208ENST00000446182 ABCC5O15440 1437 aa16.54■□□□□ 0.24
PTPRN-208ENST00000446182 PRDM15P57071 1507 aaPredicted RBP16.54■□□□□ 0.24
PTPRN-208ENST00000446182 ARHGAP31Q2M1Z3 1444 aa16.53■□□□□ 0.24
PTPRN-208ENST00000446182 ERBINQ96RT1 1412 aa16.53■□□□□ 0.24
PTPRN-208ENST00000446182 MED1Q15648 1581 aaPredicted RBP16.52■□□□□ 0.24
PTPRN-208ENST00000446182 LRRC7Q96NW7 1537 aa16.52■□□□□ 0.24
PTPRN-208ENST00000446182 UBR1Q8IWV7 1749 aa16.51■□□□□ 0.23
PTPRN-208ENST00000446182 SCAF11Q99590 1463 aaKnown RBP16.51■□□□□ 0.23
PTPRN-208ENST00000446182 RRP7BPQ9NSQ0 103 aa16.51■□□□□ 0.23
PTPRN-208ENST00000446182 STRCP1A6NGW2 1772 aa16.51■□□□□ 0.23
PTPRN-208ENST00000446182 CROCC2H7BZ55 1655 aa16.5■□□□□ 0.23
PTPRN-208ENST00000446182 ARHGAP23Q9P227 1491 aa16.5■□□□□ 0.23
PTPRN-208ENST00000446182 PTPN23Q9H3S7 1636 aa16.5■□□□□ 0.23
PTPRN-208ENST00000446182 SLIT1O75093 1534 aa16.5■□□□□ 0.23
PTPRN-208ENST00000446182 SYNMO15061 1565 aa16.49■□□□□ 0.23
PTPRN-208ENST00000446182 DAPK1P53355 1430 aa16.49■□□□□ 0.23
PTPRN-208ENST00000446182 LTKP29376 864 aa16.48■□□□□ 0.23
PTPRN-208ENST00000446182 FGD6Q6ZV73 1430 aa16.47■□□□□ 0.23
PTPRN-208ENST00000446182 TXNDC2Q86VQ3 553 aa16.47■□□□□ 0.23
PTPRN-208ENST00000446182 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.47■□□□□ 0.23
PTPRN-208ENST00000446182 CFAP65Q6ZU64 1925 aaKnown RBP16.46■□□□□ 0.23
PTPRN-208ENST00000446182 APLP2Q06481 763 aa16.45■□□□□ 0.22
PTPRN-208ENST00000446182 KANK1Q14678 1352 aa16.44■□□□□ 0.22
PTPRN-208ENST00000446182 LMTK2Q8IWU2 1503 aa16.44■□□□□ 0.22
PTPRN-208ENST00000446182 ANKRD30AQ9BXX3 1397 aa16.43■□□□□ 0.22
PTPRN-208ENST00000446182 TMEM2Q9UHN6 1383 aa16.43■□□□□ 0.22
PTPRN-208ENST00000446182 EID1Q9Y6B2 187 aa16.43■□□□□ 0.22
PTPRN-208ENST00000446182 PIK3C2BO00750 1634 aa16.43■□□□□ 0.22
PTPRN-208ENST00000446182 CHIC2Q9UKJ5 165 aa16.42■□□□□ 0.22
PTPRN-208ENST00000446182 IDI1Q13907 227 aa16.4■□□□□ 0.22
PTPRN-208ENST00000446182 SENP3Q9H4L4 574 aaPredicted RBP16.4■□□□□ 0.22
PTPRN-208ENST00000446182 EFCAB6Q5THR3 1501 aa16.4■□□□□ 0.22
PTPRN-208ENST00000446182 STAG3Q9UJ98 1225 aa16.39■□□□□ 0.21
PTPRN-208ENST00000446182 NOS1P29475 1434 aa16.38■□□□□ 0.21
PTPRN-208ENST00000446182 PHF23Q9BUL5 403 aaPredicted RBP16.38■□□□□ 0.21
PTPRN-208ENST00000446182 KDM5AP29375 1690 aaKnown RBP16.37■□□□□ 0.21
PTPRN-208ENST00000446182 ADGRL2O95490 1459 aa16.37■□□□□ 0.21
PTPRN-208ENST00000446182 XIRP1Q702N8 1843 aaKnown RBP16.35■□□□□ 0.21
PTPRN-208ENST00000446182 ADGRB3O60242 1522 aa16.35■□□□□ 0.21
PTPRN-208ENST00000446182 TET3O43151 1660 aa16.34■□□□□ 0.21
PTPRN-208ENST00000446182 KCNA6P17658 529 aa16.34■□□□□ 0.21
PTPRN-208ENST00000446182 TMEM94Q12767 1356 aa16.34■□□□□ 0.21
PTPRN-208ENST00000446182 SLC26A8Q96RN1 970 aa16.33■□□□□ 0.2
PTPRN-208ENST00000446182 FAM135BQ49AJ0 1406 aa16.32■□□□□ 0.2
PTPRN-208ENST00000446182 SLC52A1Q9NWF4 448 aa16.32■□□□□ 0.2
PTPRN-208ENST00000446182 ANKRD50Q9ULJ7 1429 aa16.31■□□□□ 0.2
PTPRN-208ENST00000446182 FAM50AQ14320 339 aaKnown RBP16.31■□□□□ 0.2
PTPRN-208ENST00000446182 RPRD2Q5VT52 1461 aaKnown RBP16.3■□□□□ 0.2
PTPRN-208ENST00000446182 NWD1Q149M9 1564 aa16.29■□□□□ 0.2
PTPRN-208ENST00000446182 NKTRP30414 1462 aaKnown RBP16.29■□□□□ 0.2
PTPRN-208ENST00000446182 PROSER2Q86WR7 435 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms