RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SPATA31E1Q6ZUB1 1445 aa23.23■■□□□ 1.31
LAPTM4B-201ENST00000445593 MRS2Q9HD23 443 aa23.22■■□□□ 1.31
LAPTM4B-201ENST00000445593 PRKRIP1Q9H875 184 aaPredicted RBP23.22■■□□□ 1.31
LAPTM4B-201ENST00000445593 NPM1P06748 294 aaKnown RBP eCLIP23.22■■□□□ 1.31
LAPTM4B-201ENST00000445593 NBPF1Q3BBV0 1214 aa23.22■■□□□ 1.31
LAPTM4B-201ENST00000445593 UHRF1BP1LA0JNW5 1464 aa23.21■■□□□ 1.31
LAPTM4B-201ENST00000445593 FKBP8Q14318 412 aa23.2■■□□□ 1.3
LAPTM4B-201ENST00000445593 ROCK2O75116 1388 aaKnown RBP23.2■■□□□ 1.3
LAPTM4B-201ENST00000445593 WDR7Q9Y4E6 1490 aa23.18■■□□□ 1.3
LAPTM4B-201ENST00000445593 KIF3BO15066 747 aa23.17■■□□□ 1.3
LAPTM4B-201ENST00000445593 KDM5DQ9BY66 1539 aa23.17■■□□□ 1.3
LAPTM4B-201ENST00000445593 ASXL2Q76L83 1435 aa23.16■■□□□ 1.3
LAPTM4B-201ENST00000445593 SCAPERQ9BY12 1400 aa23.16■■□□□ 1.3
LAPTM4B-201ENST00000445593 PLA2R1Q13018 1463 aa23.15■■□□□ 1.3
LAPTM4B-201ENST00000445593 FANCAO15360 1455 aa23.15■■□□□ 1.3
LAPTM4B-201ENST00000445593 ABCC1P33527 1531 aa23.15■■□□□ 1.3
LAPTM4B-201ENST00000445593 DUOX2Q9NRD8 1548 aa23.12■■□□□ 1.29
LAPTM4B-201ENST00000445593 BCORL1Q5H9F3 1711 aa23.11■■□□□ 1.29
LAPTM4B-201ENST00000445593 IRX6P78412 446 aaPredicted RBP23.1■■□□□ 1.29
LAPTM4B-201ENST00000445593 MAST1Q9Y2H9 1570 aa23.09■■□□□ 1.29
LAPTM4B-201ENST00000445593 RALGAPBQ86X10 1494 aa23.08■■□□□ 1.29
LAPTM4B-201ENST00000445593 ADGRL1O94910 1474 aa23.08■■□□□ 1.29
LAPTM4B-201ENST00000445593 UHRF1BP1Q6BDS2 1440 aa23.06■■□□□ 1.28
LAPTM4B-201ENST00000445593 PLXNC1O60486 1568 aa23.06■■□□□ 1.28
LAPTM4B-201ENST00000445593 NEFLP07196 543 aa23.06■■□□□ 1.28
LAPTM4B-201ENST00000445593 ERBINQ96RT1 1412 aa23.06■■□□□ 1.28
LAPTM4B-201ENST00000445593 KDM5CP41229 1560 aa23.05■■□□□ 1.28
LAPTM4B-201ENST00000445593 A2MP01023 1474 aa23.04■■□□□ 1.28
LAPTM4B-201ENST00000445593 UNC13BO14795 1591 aa23.04■■□□□ 1.28
LAPTM4B-201ENST00000445593 PRAG1Q86YV5 1406 aa23.02■■□□□ 1.28
LAPTM4B-201ENST00000445593 CYB5RLQ6IPT4 315 aa23.01■■□□□ 1.27
LAPTM4B-201ENST00000445593 GGT6Q6P531 493 aa23.01■■□□□ 1.27
LAPTM4B-201ENST00000445593 SENP3Q9H4L4 574 aaPredicted RBP23.01■■□□□ 1.27
LAPTM4B-201ENST00000445593 ZFYVE16Q7Z3T8 1539 aa23.01■■□□□ 1.27
LAPTM4B-201ENST00000445593 CHGAP10645 457 aaKnown RBP23■■□□□ 1.27
LAPTM4B-201ENST00000445593 DHX29Q7Z478 1369 aaKnown RBP22.99■■□□□ 1.27
LAPTM4B-201ENST00000445593 IQGAP3Q86VI3 1631 aa22.99■■□□□ 1.27
LAPTM4B-201ENST00000445593 RAPGEF3O95398 923 aa22.98■■□□□ 1.27
LAPTM4B-201ENST00000445593 ATP7AQ04656 1500 aa22.96■■□□□ 1.27
LAPTM4B-201ENST00000445593 KANK1Q14678 1352 aa22.95■■□□□ 1.26
LAPTM4B-201ENST00000445593 CD109Q6YHK3 1445 aa22.94■■□□□ 1.26
LAPTM4B-201ENST00000445593 TMC1Q8TDI8 760 aa22.93■■□□□ 1.26
LAPTM4B-201ENST00000445593 RTEL1-TNFRSF6BF6WH68 1400 aa22.92■■□□□ 1.26
LAPTM4B-201ENST00000445593 CC2D1BQ5T0F9 858 aaKnown RBP22.91■■□□□ 1.26
LAPTM4B-201ENST00000445593 ABCA9Q8IUA7 1624 aa22.91■■□□□ 1.26
LAPTM4B-201ENST00000445593 SALL2Q9Y467 1007 aaPredicted RBP22.91■■□□□ 1.26
LAPTM4B-201ENST00000445593 MAGI2Q86UL8 1455 aa22.9■■□□□ 1.26
LAPTM4B-201ENST00000445593 DISP3Q9P2K9 1392 aa22.9■■□□□ 1.26
LAPTM4B-201ENST00000445593 ATP10AO60312 1499 aa22.89■■□□□ 1.25
LAPTM4B-201ENST00000445593 UGGT1Q9NYU2 1555 aa22.88■■□□□ 1.25
LAPTM4B-201ENST00000445593 E9PCH4 1651 aa22.87■■□□□ 1.25
LAPTM4B-201ENST00000445593 POLR1AO95602 1720 aaPredicted RBP22.86■■□□□ 1.25
LAPTM4B-201ENST00000445593 TRPM1Q7Z4N2 1603 aa22.86■■□□□ 1.25
LAPTM4B-201ENST00000445593 ARAP3Q8WWN8 1544 aa22.86■■□□□ 1.25
LAPTM4B-201ENST00000445593 NUTM2DQ5VT03 806 aaPredicted RBP22.85■■□□□ 1.25
LAPTM4B-201ENST00000445593 TESK2Q96S53 571 aa22.85■■□□□ 1.25
LAPTM4B-201ENST00000445593 ARID4BQ4LE39 1312 aaPredicted RBP22.85■■□□□ 1.25
LAPTM4B-201ENST00000445593 CFAP65Q6ZU64 1925 aaKnown RBP22.84■■□□□ 1.25
LAPTM4B-201ENST00000445593 PANK3Q9H999 370 aa22.83■■□□□ 1.25
LAPTM4B-201ENST00000445593 CFAP70Q5T0N1 1121 aa22.83■■□□□ 1.24
LAPTM4B-201ENST00000445593 TMF1P82094 1093 aa22.82■■□□□ 1.24
LAPTM4B-201ENST00000445593 INO80Q9ULG1 1556 aaPredicted RBP22.82■■□□□ 1.24
LAPTM4B-201ENST00000445593 ZNF518AQ6AHZ1 1483 aa22.8■■□□□ 1.24
LAPTM4B-201ENST00000445593 ADGRF5Q8IZF2 1346 aa22.79■■□□□ 1.24
LAPTM4B-201ENST00000445593 WASHC2CQ9Y4E1 1318 aa22.79■■□□□ 1.24
LAPTM4B-201ENST00000445593 CLTCL1P53675 1640 aa22.78■■□□□ 1.24
LAPTM4B-201ENST00000445593 GPRASP1Q5JY77 1395 aa22.77■■□□□ 1.24
LAPTM4B-201ENST00000445593 ZBED9Q6R2W3 1325 aa22.77■■□□□ 1.24
LAPTM4B-201ENST00000445593 KIDINS220Q9ULH0 1771 aa22.76■■□□□ 1.23
LAPTM4B-201ENST00000445593 PNISRQ8TF01 805 aaKnown RBP22.76■■□□□ 1.23
LAPTM4B-201ENST00000445593 TRPM2O94759 1503 aa22.75■■□□□ 1.23
LAPTM4B-201ENST00000445593 MYBBP1AQ9BQG0 1328 aaKnown RBP22.74■■□□□ 1.23
LAPTM4B-201ENST00000445593 KTN1Q86UP2 1357 aaKnown RBP22.74■■□□□ 1.23
LAPTM4B-201ENST00000445593 POGZQ7Z3K3 1410 aa22.74■■□□□ 1.23
LAPTM4B-201ENST00000445593 PTPRTO14522 1441 aa22.73■■□□□ 1.23
LAPTM4B-201ENST00000445593 SPHKAPQ2M3C7 1700 aa22.73■■□□□ 1.23
LAPTM4B-201ENST00000445593 FAM69CQ0P6D2 419 aa22.72■■□□□ 1.23
LAPTM4B-201ENST00000445593 PRDM15P57071 1507 aaPredicted RBP22.71■■□□□ 1.23
LAPTM4B-201ENST00000445593 PER1O15534 1290 aaPredicted RBP22.71■■□□□ 1.23
LAPTM4B-201ENST00000445593 COL17A1Q9UMD9 1497 aaPredicted RBP22.71■■□□□ 1.23
LAPTM4B-201ENST00000445593 TET3O43151 1660 aa22.71■■□□□ 1.23
LAPTM4B-201ENST00000445593 RALBP1Q15311 655 aa22.71■■□□□ 1.23
LAPTM4B-201ENST00000445593 DEPDC5O75140 1603 aa22.69■■□□□ 1.22
LAPTM4B-201ENST00000445593 MROH1Q8NDA8 1641 aa22.69■■□□□ 1.22
LAPTM4B-201ENST00000445593 TMEM132EQ6IEE7 984 aa22.69■■□□□ 1.22
LAPTM4B-201ENST00000445593 EIF2AK4Q9P2K8 1649 aaKnown RBP22.68■■□□□ 1.22
LAPTM4B-201ENST00000445593 TSHZ2Q9NRE2 1034 aa22.68■■□□□ 1.22
LAPTM4B-201ENST00000445593 TRAK1Q9UPV9 953 aa22.67■■□□□ 1.22
LAPTM4B-201ENST00000445593 ANP32EQ9BTT0 268 aa22.66■■□□□ 1.22
LAPTM4B-201ENST00000445593 MADDQ8WXG6 1647 aa22.66■■□□□ 1.22
LAPTM4B-201ENST00000445593 CEP152O94986 1710 aa22.66■■□□□ 1.22
LAPTM4B-201ENST00000445593 NLRP13Q86W25 1043 aa22.65■■□□□ 1.22
LAPTM4B-201ENST00000445593 KNSTRNQ9Y448 316 aa22.65■■□□□ 1.22
LAPTM4B-201ENST00000445593 NPATQ14207 1427 aa22.64■■□□□ 1.22
LAPTM4B-201ENST00000445593 NOS1P29475 1434 aa22.64■■□□□ 1.21
LAPTM4B-201ENST00000445593 PPRC1Q5VV67 1664 aaKnown RBP22.64■■□□□ 1.21
LAPTM4B-201ENST00000445593 VWDEQ8N2E2 1590 aa22.63■■□□□ 1.21
LAPTM4B-201ENST00000445593 YEATS2Q9ULM3 1422 aa22.63■■□□□ 1.21
LAPTM4B-201ENST00000445593 MLECQ14165 292 aa22.62■■□□□ 1.21
LAPTM4B-201ENST00000445593 EFCAB6Q5THR3 1501 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms