RNA–Protein interactions for RNA: ENST00000445537.6

PTPRO-204, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRO, Length 4,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-204ENST00000445537 ABCA8O94911 1581 aa7.25□□□□□ -1.25
PTPRO-204ENST00000445537 GPATCH8Q9UKJ3 1502 aaKnown RBP7.25□□□□□ -1.25
PTPRO-204ENST00000445537 LMTK3Q96Q04 1460 aa7.25□□□□□ -1.25
PTPRO-204ENST00000445537 CCDC144AA2RUR9 1427 aa7.25□□□□□ -1.25
PTPRO-204ENST00000445537 TRAPPC8Q9Y2L5 1435 aa7.25□□□□□ -1.25
PTPRO-204ENST00000445537 SUPT6HQ7KZ85 1726 aaKnown RBP7.25□□□□□ -1.25
PTPRO-204ENST00000445537 ADCY10Q96PN6 1610 aa7.25□□□□□ -1.25
PTPRO-204ENST00000445537 CFAP74Q9C0B2 1584 aa7.25□□□□□ -1.25
PTPRO-204ENST00000445537 NCKAP5LQ9HCH0 1330 aa7.24□□□□□ -1.25
PTPRO-204ENST00000445537 CDCA8Q53HL2 280 aa7.24□□□□□ -1.25
PTPRO-204ENST00000445537 CAMSAP2Q08AD1 1489 aa7.23□□□□□ -1.25
PTPRO-204ENST00000445537 SETD5Q9C0A6 1442 aa7.23□□□□□ -1.25
PTPRO-204ENST00000445537 SHROOM2Q13796 1616 aa7.22□□□□□ -1.25
PTPRO-204ENST00000445537 NUTM2BA6NNL0 878 aaPredicted RBP7.22□□□□□ -1.25
PTPRO-204ENST00000445537 NUTM2EB1AL46 878 aaPredicted RBP7.22□□□□□ -1.25
PTPRO-204ENST00000445537 NUTM2AQ8IVF1 878 aaPredicted RBP7.22□□□□□ -1.25
PTPRO-204ENST00000445537 PSME1Q06323 249 aa7.22□□□□□ -1.25
PTPRO-204ENST00000445537 YEATS2Q9ULM3 1422 aa7.22□□□□□ -1.25
PTPRO-204ENST00000445537 CARD11Q9BXL7 1154 aa7.22□□□□□ -1.25
PTPRO-204ENST00000445537 IDI1Q13907 227 aa7.22□□□□□ -1.25
PTPRO-204ENST00000445537 NPM2Q86SE8 214 aaKnown RBP7.22□□□□□ -1.25
PTPRO-204ENST00000445537 TIAM1Q13009 1591 aa7.21□□□□□ -1.25
PTPRO-204ENST00000445537 SYCP2Q9BX26 1530 aa7.21□□□□□ -1.25
PTPRO-204ENST00000445537 CSB-PGBD3P0DP91 1061 aa7.21□□□□□ -1.26
PTPRO-204ENST00000445537 CADPS2Q86UW7 1296 aa7.21□□□□□ -1.26
PTPRO-204ENST00000445537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.2□□□□□ -1.26
PTPRO-204ENST00000445537 SAMD9Q5K651 1589 aa7.2□□□□□ -1.26
PTPRO-204ENST00000445537 DIP2BQ9P265 1576 aa7.2□□□□□ -1.26
PTPRO-204ENST00000445537 KDM4FA0A1W2PPD8 638 aa7.2□□□□□ -1.26
PTPRO-204ENST00000445537 TRAK1Q9UPV9 953 aa7.2□□□□□ -1.26
PTPRO-204ENST00000445537 MSH6P52701 1360 aa7.2□□□□□ -1.26
PTPRO-204ENST00000445537 DAPK1P53355 1430 aa7.2□□□□□ -1.26
PTPRO-204ENST00000445537 SOX12O15370 315 aa7.2□□□□□ -1.26
PTPRO-204ENST00000445537 ESCO1Q5FWF5 840 aa7.2□□□□□ -1.26
PTPRO-204ENST00000445537 EVA1CP58658 441 aa7.19□□□□□ -1.26
PTPRO-204ENST00000445537 SF3B2Q13435 895 aaKnown RBP7.19□□□□□ -1.26
PTPRO-204ENST00000445537 RTEL1-TNFRSF6BF6WH68 1400 aa7.19□□□□□ -1.26
PTPRO-204ENST00000445537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.19□□□□□ -1.26
PTPRO-204ENST00000445537 STAC3Q96MF2 364 aa7.18□□□□□ -1.26
PTPRO-204ENST00000445537 DHX57Q6P158 1386 aaKnown RBP7.18□□□□□ -1.26
PTPRO-204ENST00000445537 HDGFL2Q7Z4V5 671 aaPredicted RBP7.18□□□□□ -1.26
PTPRO-204ENST00000445537 CERKQ8TCT0 537 aa7.18□□□□□ -1.26
PTPRO-204ENST00000445537 CFAP43Q8NDM7 1665 aa7.17□□□□□ -1.26
PTPRO-204ENST00000445537 ARAP3Q8WWN8 1544 aa7.17□□□□□ -1.26
PTPRO-204ENST00000445537 AMOTL2Q9Y2J4 779 aa7.17□□□□□ -1.26
PTPRO-204ENST00000445537 RPGRIP1LQ68CZ1 1315 aa7.17□□□□□ -1.26
PTPRO-204ENST00000445537 GLI2P10070 1586 aa7.17□□□□□ -1.26
PTPRO-204ENST00000445537 PPM1GO15355 546 aaPredicted RBP7.16□□□□□ -1.26
PTPRO-204ENST00000445537 RBM33Q96EV2 1170 aaKnown RBP7.16□□□□□ -1.26
PTPRO-204ENST00000445537 ITSN2Q9NZM3 1697 aa7.16□□□□□ -1.26
PTPRO-204ENST00000445537 MLH3Q9UHC1 1453 aa7.16□□□□□ -1.26
PTPRO-204ENST00000445537 ATP7AQ04656 1500 aa7.15□□□□□ -1.26
PTPRO-204ENST00000445537 MINK1Q8N4C8 1332 aaPredicted RBP7.15□□□□□ -1.26
PTPRO-204ENST00000445537 NGLY1Q96IV0 654 aa7.15□□□□□ -1.26
PTPRO-204ENST00000445537 GPRASP1Q5JY77 1395 aa7.15□□□□□ -1.26
PTPRO-204ENST00000445537 RAB3GAP2Q9H2M9 1393 aa7.15□□□□□ -1.26
PTPRO-204ENST00000445537 ABCC5O15440 1437 aa7.15□□□□□ -1.26
PTPRO-204ENST00000445537 EIF3AQ14152 1382 aaKnown RBP7.15□□□□□ -1.27
PTPRO-204ENST00000445537 DCAF8L1A6NGE4 600 aa7.15□□□□□ -1.27
PTPRO-204ENST00000445537 HIRIP3Q9BW71 556 aaPredicted RBP7.15□□□□□ -1.27
PTPRO-204ENST00000445537 MYO5CQ9NQX4 1742 aa7.15□□□□□ -1.27
PTPRO-204ENST00000445537 MAP3K1Q13233 1512 aa7.14□□□□□ -1.27
PTPRO-204ENST00000445537 NCOA1Q15788 1441 aa7.14□□□□□ -1.27
PTPRO-204ENST00000445537 EIF4G2P78344 907 aaKnown RBP eCLIP7.14□□□□□ -1.27
PTPRO-204ENST00000445537 TMF1P82094 1093 aa7.13□□□□□ -1.27
PTPRO-204ENST00000445537 TMEM132EQ6IEE7 984 aa7.13□□□□□ -1.27
PTPRO-204ENST00000445537 TERF2IPQ9NYB0 399 aa7.13□□□□□ -1.27
PTPRO-204ENST00000445537 DUOX2Q9NRD8 1548 aa7.13□□□□□ -1.27
PTPRO-204ENST00000445537 ROCK1Q13464 1354 aa7.13□□□□□ -1.27
PTPRO-204ENST00000445537 C19orf44Q9H6X5 657 aa7.13□□□□□ -1.27
PTPRO-204ENST00000445537 RRBP1Q9P2E9 1410 aaKnown RBP7.13□□□□□ -1.27
PTPRO-204ENST00000445537 PTPRMP28827 1452 aa7.13□□□□□ -1.27
PTPRO-204ENST00000445537 ERBINQ96RT1 1412 aa7.13□□□□□ -1.27
PTPRO-204ENST00000445537 SIN3AQ96ST3 1273 aa7.13□□□□□ -1.27
PTPRO-204ENST00000445537 HFM1A2PYH4 1435 aa7.12□□□□□ -1.27
PTPRO-204ENST00000445537 ADAMTS2O95450 1211 aa7.12□□□□□ -1.27
PTPRO-204ENST00000445537 KCNA6P17658 529 aa7.12□□□□□ -1.27
PTPRO-204ENST00000445537 ROCK2O75116 1388 aaKnown RBP7.12□□□□□ -1.27
PTPRO-204ENST00000445537 ANKRD30BQ9BXX2 1392 aa7.12□□□□□ -1.27
PTPRO-204ENST00000445537 FBXO41Q8TF61 875 aa7.11□□□□□ -1.27
PTPRO-204ENST00000445537 DISP3Q9P2K9 1392 aa7.11□□□□□ -1.27
PTPRO-204ENST00000445537 ABCA9Q8IUA7 1624 aa7.11□□□□□ -1.27
PTPRO-204ENST00000445537 TTC37Q6PGP7 1564 aa7.11□□□□□ -1.27
PTPRO-204ENST00000445537 EVC2Q86UK5 1308 aa7.11□□□□□ -1.27
PTPRO-204ENST00000445537 LRPPRCP42704 1394 aaKnown RBP7.11□□□□□ -1.27
PTPRO-204ENST00000445537 PTPN23Q9H3S7 1636 aa7.11□□□□□ -1.27
PTPRO-204ENST00000445537 HRCP23327 699 aa7.11□□□□□ -1.27
PTPRO-204ENST00000445537 TBX22Q9Y458 520 aa7.11□□□□□ -1.27
PTPRO-204ENST00000445537 ZNF335Q9H4Z2 1342 aaPredicted RBP7.11□□□□□ -1.27
PTPRO-204ENST00000445537 HECW2Q9P2P5 1572 aa7.1□□□□□ -1.27
PTPRO-204ENST00000445537 KNSTRNQ9Y448 316 aa7.1□□□□□ -1.27
PTPRO-204ENST00000445537 COL17A1Q9UMD9 1497 aaPredicted RBP7.1□□□□□ -1.27
PTPRO-204ENST00000445537 CFAP70Q5T0N1 1121 aa7.1□□□□□ -1.27
PTPRO-204ENST00000445537 LRRC59Q96AG4 307 aaKnown RBP7.1□□□□□ -1.27
PTPRO-204ENST00000445537 PRAM1Q96QH2 718 aa7.1□□□□□ -1.27
PTPRO-204ENST00000445537 PMFBP1Q8TBY8 1022 aa7.09□□□□□ -1.27
PTPRO-204ENST00000445537 FOXO3O43524 673 aa7.09□□□□□ -1.27
PTPRO-204ENST00000445537 PRDM11Q9NQV5 511 aa7.09□□□□□ -1.27
PTPRO-204ENST00000445537 RIMS2Q9UQ26 1411 aa7.09□□□□□ -1.28
PTPRO-204ENST00000445537 AMPHP49418 695 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms