RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 EFCAB2Q5VUJ9 269 aa19.64■□□□□ 0.74
NCLP1-201ENST00000445357 ARID4BQ4LE39 1312 aaPredicted RBP19.62■□□□□ 0.73
NCLP1-201ENST00000445357 ATP10AO60312 1499 aa19.61■□□□□ 0.73
NCLP1-201ENST00000445357 CCDC144AA2RUR9 1427 aa19.6■□□□□ 0.73
NCLP1-201ENST00000445357 PLA2R1Q13018 1463 aa19.6■□□□□ 0.73
NCLP1-201ENST00000445357 TRPM1Q7Z4N2 1603 aa19.6■□□□□ 0.73
NCLP1-201ENST00000445357 PRKRIP1Q9H875 184 aaPredicted RBP19.6■□□□□ 0.73
NCLP1-201ENST00000445357 WDR7Q9Y4E6 1490 aa19.6■□□□□ 0.73
NCLP1-201ENST00000445357 ABCA9Q8IUA7 1624 aa19.6■□□□□ 0.73
NCLP1-201ENST00000445357 RTEL1-TNFRSF6BF6WH68 1400 aa19.59■□□□□ 0.73
NCLP1-201ENST00000445357 TRAPPC8Q9Y2L5 1435 aa19.59■□□□□ 0.73
NCLP1-201ENST00000445357 TRHP20396 242 aaPredicted RBP19.58■□□□□ 0.73
NCLP1-201ENST00000445357 ZNF326Q5BKZ1 582 aaKnown RBP19.58■□□□□ 0.73
NCLP1-201ENST00000445357 ZFYVE16Q7Z3T8 1539 aa19.58■□□□□ 0.72
NCLP1-201ENST00000445357 LAMC1P11047 1609 aa19.56■□□□□ 0.72
NCLP1-201ENST00000445357 PHF23Q9BUL5 403 aaPredicted RBP19.56■□□□□ 0.72
NCLP1-201ENST00000445357 PRAG1Q86YV5 1406 aa19.55■□□□□ 0.72
NCLP1-201ENST00000445357 DEPDC5O75140 1603 aa19.54■□□□□ 0.72
NCLP1-201ENST00000445357 INO80Q9ULG1 1556 aaPredicted RBP19.54■□□□□ 0.72
NCLP1-201ENST00000445357 ROCK2O75116 1388 aaKnown RBP19.54■□□□□ 0.72
NCLP1-201ENST00000445357 DHX29Q7Z478 1369 aaKnown RBP19.54■□□□□ 0.72
NCLP1-201ENST00000445357 DCAF11Q8TEB1 546 aa19.53■□□□□ 0.72
NCLP1-201ENST00000445357 CARD11Q9BXL7 1154 aa19.53■□□□□ 0.72
NCLP1-201ENST00000445357 A2MP01023 1474 aa19.53■□□□□ 0.72
NCLP1-201ENST00000445357 EIF2AK4Q9P2K8 1649 aaKnown RBP19.52■□□□□ 0.71
NCLP1-201ENST00000445357 E9PCH4 1651 aa19.51■□□□□ 0.71
NCLP1-201ENST00000445357 GPRASP1Q5JY77 1395 aa19.5■□□□□ 0.71
NCLP1-201ENST00000445357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.5■□□□□ 0.71
NCLP1-201ENST00000445357 HNRNPUQ00839 825 aaKnown RBP eCLIP19.49■□□□□ 0.71
NCLP1-201ENST00000445357 CCDC184Q52MB2 194 aa19.49■□□□□ 0.71
NCLP1-201ENST00000445357 FANCAO15360 1455 aa19.49■□□□□ 0.71
NCLP1-201ENST00000445357 KDM2AQ9Y2K7 1162 aa19.48■□□□□ 0.71
NCLP1-201ENST00000445357 SPAG9O60271 1321 aaKnown RBP19.48■□□□□ 0.71
NCLP1-201ENST00000445357 ATP7AQ04656 1500 aa19.48■□□□□ 0.71
NCLP1-201ENST00000445357 PRDM15P57071 1507 aaPredicted RBP19.46■□□□□ 0.71
NCLP1-201ENST00000445357 TET3O43151 1660 aa19.46■□□□□ 0.71
NCLP1-201ENST00000445357 SPHKAPQ2M3C7 1700 aa19.45■□□□□ 0.7
NCLP1-201ENST00000445357 VWDEQ8N2E2 1590 aa19.45■□□□□ 0.7
NCLP1-201ENST00000445357 RNF17Q9BXT8 1623 aaKnown RBP19.45■□□□□ 0.7
NCLP1-201ENST00000445357 CEP152O94986 1710 aa19.45■□□□□ 0.7
NCLP1-201ENST00000445357 TRPM2O94759 1503 aa19.45■□□□□ 0.7
NCLP1-201ENST00000445357 MRS2Q9HD23 443 aa19.44■□□□□ 0.7
NCLP1-201ENST00000445357 ASXL2Q76L83 1435 aa19.44■□□□□ 0.7
NCLP1-201ENST00000445357 FKBP8Q14318 412 aa19.43■□□□□ 0.7
NCLP1-201ENST00000445357 ST20-MTHFSA0A0A6YYL1 179 aa19.43■□□□□ 0.7
NCLP1-201ENST00000445357 ADGRL1O94910 1474 aa19.43■□□□□ 0.7
NCLP1-201ENST00000445357 NEFLP07196 543 aa19.43■□□□□ 0.7
NCLP1-201ENST00000445357 AFAP1Q8N556 730 aa19.42■□□□□ 0.7
NCLP1-201ENST00000445357 PTPRTO14522 1441 aa19.4■□□□□ 0.7
NCLP1-201ENST00000445357 MADDQ8WXG6 1647 aa19.38■□□□□ 0.69
NCLP1-201ENST00000445357 RGL3Q3MIN7 710 aa19.38■□□□□ 0.69
NCLP1-201ENST00000445357 MROH1Q8NDA8 1641 aa19.38■□□□□ 0.69
NCLP1-201ENST00000445357 SCAPERQ9BY12 1400 aa19.38■□□□□ 0.69
NCLP1-201ENST00000445357 NEURL4Q96JN8 1562 aa19.37■□□□□ 0.69
NCLP1-201ENST00000445357 CFAP74Q9C0B2 1584 aa19.37■□□□□ 0.69
NCLP1-201ENST00000445357 KTN1Q86UP2 1357 aaKnown RBP19.37■□□□□ 0.69
NCLP1-201ENST00000445357 CLTCL1P53675 1640 aa19.37■□□□□ 0.69
NCLP1-201ENST00000445357 COL17A1Q9UMD9 1497 aaPredicted RBP19.37■□□□□ 0.69
NCLP1-201ENST00000445357 ZBED9Q6R2W3 1325 aa19.37■□□□□ 0.69
NCLP1-201ENST00000445357 POLR3GLQ9BT43 218 aa19.37■□□□□ 0.69
NCLP1-201ENST00000445357 KIDINS220Q9ULH0 1771 aa19.36■□□□□ 0.69
NCLP1-201ENST00000445357 NPM1P06748 294 aaKnown RBP eCLIP19.36■□□□□ 0.69
NCLP1-201ENST00000445357 FAM9BQ8IZU0 186 aa19.35■□□□□ 0.69
NCLP1-201ENST00000445357 NBPF1Q3BBV0 1214 aa19.34■□□□□ 0.69
NCLP1-201ENST00000445357 IQGAP1P46940 1657 aa19.34■□□□□ 0.69
NCLP1-201ENST00000445357 KANK1Q14678 1352 aa19.34■□□□□ 0.69
NCLP1-201ENST00000445357 ZNF518AQ6AHZ1 1483 aa19.31■□□□□ 0.68
NCLP1-201ENST00000445357 STAC3Q96MF2 364 aa19.31■□□□□ 0.68
NCLP1-201ENST00000445357 KIAA1210Q9ULL0 1709 aa19.3■□□□□ 0.68
NCLP1-201ENST00000445357 BCANQ96GW7 911 aa19.3■□□□□ 0.68
NCLP1-201ENST00000445357 EFCAB6Q5THR3 1501 aa19.29■□□□□ 0.68
NCLP1-201ENST00000445357 TESK2Q96S53 571 aa19.28■□□□□ 0.68
NCLP1-201ENST00000445357 LMTK2Q8IWU2 1503 aa19.28■□□□□ 0.68
NCLP1-201ENST00000445357 RALBP1Q15311 655 aa19.28■□□□□ 0.68
NCLP1-201ENST00000445357 BRD4O60885 1362 aaPredicted RBP19.27■□□□□ 0.68
NCLP1-201ENST00000445357 KIF1BO60333 1816 aa19.26■□□□□ 0.67
NCLP1-201ENST00000445357 PPRC1Q5VV67 1664 aaKnown RBP19.25■□□□□ 0.67
NCLP1-201ENST00000445357 DISP3Q9P2K9 1392 aa19.25■□□□□ 0.67
NCLP1-201ENST00000445357 MYBBP1AQ9BQG0 1328 aaKnown RBP19.25■□□□□ 0.67
NCLP1-201ENST00000445357 KIF3BO15066 747 aa19.25■□□□□ 0.67
NCLP1-201ENST00000445357 IFT172Q9UG01 1749 aa19.25■□□□□ 0.67
NCLP1-201ENST00000445357 POGZQ7Z3K3 1410 aa19.25■□□□□ 0.67
NCLP1-201ENST00000445357 PARD3Q8TEW0 1356 aa19.24■□□□□ 0.67
NCLP1-201ENST00000445357 PNISRQ8TF01 805 aaKnown RBP19.24■□□□□ 0.67
NCLP1-201ENST00000445357 MLH3Q9UHC1 1453 aa19.24■□□□□ 0.67
NCLP1-201ENST00000445357 CD109Q6YHK3 1445 aa19.23■□□□□ 0.67
NCLP1-201ENST00000445357 LRPPRCP42704 1394 aaKnown RBP19.23■□□□□ 0.67
NCLP1-201ENST00000445357 HECW2Q9P2P5 1572 aa19.23■□□□□ 0.67
NCLP1-201ENST00000445357 ERICH6BQ5W0A0 696 aa19.23■□□□□ 0.67
NCLP1-201ENST00000445357 FAM69CQ0P6D2 419 aa19.23■□□□□ 0.67
NCLP1-201ENST00000445357 WASHC2CQ9Y4E1 1318 aa19.22■□□□□ 0.67
NCLP1-201ENST00000445357 MYOM2P54296 1465 aa19.21■□□□□ 0.67
NCLP1-201ENST00000445357 TSHZ2Q9NRE2 1034 aa19.21■□□□□ 0.67
NCLP1-201ENST00000445357 FRMPD1Q5SYB0 1578 aa19.21■□□□□ 0.67
NCLP1-201ENST00000445357 MAP3K4Q9Y6R4 1608 aa19.21■□□□□ 0.67
NCLP1-201ENST00000445357 PER1O15534 1290 aaPredicted RBP19.21■□□□□ 0.67
NCLP1-201ENST00000445357 SCAF11Q99590 1463 aaKnown RBP19.2■□□□□ 0.66
NCLP1-201ENST00000445357 SMG6Q86US8 1419 aaKnown RBP19.2■□□□□ 0.66
NCLP1-201ENST00000445357 TMF1P82094 1093 aa19.2■□□□□ 0.66
NCLP1-201ENST00000445357 TMC1Q8TDI8 760 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms