RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 FAM50AQ14320 339 aaKnown RBP13.28□□□□□ -0.28
FXR1-203ENST00000445140 KIF15Q9NS87 1388 aa13.28□□□□□ -0.28
FXR1-203ENST00000445140 TRHP20396 242 aaPredicted RBP13.27□□□□□ -0.28
FXR1-203ENST00000445140 ZNF777Q9ULD5 760 aaPredicted RBP13.27□□□□□ -0.29
FXR1-203ENST00000445140 MROH2AA6NES4 1674 aa13.26□□□□□ -0.29
FXR1-203ENST00000445140 SETD5Q9C0A6 1442 aa13.26□□□□□ -0.29
FXR1-203ENST00000445140 SIGLEC1Q9BZZ2 1709 aa13.26□□□□□ -0.29
FXR1-203ENST00000445140 ANKRD50Q9ULJ7 1429 aa13.25□□□□□ -0.29
FXR1-203ENST00000445140 YEATS2Q9ULM3 1422 aa13.25□□□□□ -0.29
FXR1-203ENST00000445140 AFAP1Q8N556 730 aa13.24□□□□□ -0.29
FXR1-203ENST00000445140 TET3O43151 1660 aa13.23□□□□□ -0.29
FXR1-203ENST00000445140 PPP6R1Q9UPN7 881 aa13.22□□□□□ -0.29
FXR1-203ENST00000445140 ADRA2BP18089 450 aa13.21□□□□□ -0.29
FXR1-203ENST00000445140 SLC4A1APQ9BWU0 796 aaKnown RBP13.21□□□□□ -0.3
FXR1-203ENST00000445140 RAPGEF3O95398 923 aa13.2□□□□□ -0.3
FXR1-203ENST00000445140 ADAMTSL3P82987 1691 aa13.2□□□□□ -0.3
FXR1-203ENST00000445140 ARHGAP31Q2M1Z3 1444 aa13.17□□□□□ -0.3
FXR1-203ENST00000445140 RPRD2Q5VT52 1461 aaKnown RBP13.17□□□□□ -0.3
FXR1-203ENST00000445140 CAMSAP1Q5T5Y3 1602 aa13.17□□□□□ -0.3
FXR1-203ENST00000445140 ABCC3O15438 1527 aa13.17□□□□□ -0.3
FXR1-203ENST00000445140 EFCAB6Q5THR3 1501 aa13.17□□□□□ -0.3
FXR1-203ENST00000445140 RAB3GAP2Q9H2M9 1393 aa13.17□□□□□ -0.3
FXR1-203ENST00000445140 CNTLNQ9NXG0 1405 aa13.16□□□□□ -0.3
FXR1-203ENST00000445140 NEURL4Q96JN8 1562 aa13.16□□□□□ -0.3
FXR1-203ENST00000445140 PZPP20742 1482 aa13.16□□□□□ -0.3
FXR1-203ENST00000445140 CEP152O94986 1710 aa13.15□□□□□ -0.3
FXR1-203ENST00000445140 FER1L4A9Z1Z3 1794 aa13.14□□□□□ -0.31
FXR1-203ENST00000445140 E9PCH4 1651 aa13.12□□□□□ -0.31
FXR1-203ENST00000445140 KDM5AP29375 1690 aaKnown RBP13.12□□□□□ -0.31
FXR1-203ENST00000445140 KANK1Q14678 1352 aa13.1□□□□□ -0.31
FXR1-203ENST00000445140 RRP7BPQ9NSQ0 103 aa13.1□□□□□ -0.31
FXR1-203ENST00000445140 SPHKAPQ2M3C7 1700 aa13.1□□□□□ -0.31
FXR1-203ENST00000445140 CLTCQ00610 1675 aaKnown RBP13.1□□□□□ -0.31
FXR1-203ENST00000445140 CLSPNQ9HAW4 1339 aa13.1□□□□□ -0.31
FXR1-203ENST00000445140 CHIC2Q9UKJ5 165 aa13.09□□□□□ -0.31
FXR1-203ENST00000445140 SPATA31D1Q6ZQQ2 1576 aa13.09□□□□□ -0.31
FXR1-203ENST00000445140 PIK3C2BO00750 1634 aa13.09□□□□□ -0.31
FXR1-203ENST00000445140 PREX1Q8TCU6 1659 aa13.08□□□□□ -0.32
FXR1-203ENST00000445140 PTPRTO14522 1441 aa13.08□□□□□ -0.32
FXR1-203ENST00000445140 TRPM2O94759 1503 aa13.08□□□□□ -0.32
FXR1-203ENST00000445140 C3P01024 1663 aa13.06□□□□□ -0.32
FXR1-203ENST00000445140 MADDQ8WXG6 1647 aa13.06□□□□□ -0.32
FXR1-203ENST00000445140 ITGAEP38570 1179 aa13.05□□□□□ -0.32
FXR1-203ENST00000445140 DHX57Q6P158 1386 aaKnown RBP13.05□□□□□ -0.32
FXR1-203ENST00000445140 NOS1P29475 1434 aa13.05□□□□□ -0.32
FXR1-203ENST00000445140 NPATQ14207 1427 aa13.05□□□□□ -0.32
FXR1-203ENST00000445140 PCGF6Q9BYE7 350 aa13.04□□□□□ -0.32
FXR1-203ENST00000445140 ZNF142P52746 1687 aaPredicted RBP13.04□□□□□ -0.32
FXR1-203ENST00000445140 NUP155O75694 1391 aa13.03□□□□□ -0.32
FXR1-203ENST00000445140 KIF3BO15066 747 aa13.02□□□□□ -0.32
FXR1-203ENST00000445140 RIMS1Q86UR5 1692 aaKnown RBP13.02□□□□□ -0.32
FXR1-203ENST00000445140 ERVK-7P63135 1459 aa13.01□□□□□ -0.33
FXR1-203ENST00000445140 SYNMO15061 1565 aa13.01□□□□□ -0.33
FXR1-203ENST00000445140 MYT1LQ9UL68 1186 aa12.99□□□□□ -0.33
FXR1-203ENST00000445140 ANKRD30BQ9BXX2 1392 aa12.99□□□□□ -0.33
FXR1-203ENST00000445140 MPHOSPH9Q99550 1183 aa12.98□□□□□ -0.33
FXR1-203ENST00000445140 PLA2R1Q13018 1463 aa12.98□□□□□ -0.33
FXR1-203ENST00000445140 KIF1BO60333 1816 aa12.97□□□□□ -0.33
FXR1-203ENST00000445140 CLTCL1P53675 1640 aa12.97□□□□□ -0.33
FXR1-203ENST00000445140 IFT172Q9UG01 1749 aa12.97□□□□□ -0.33
FXR1-203ENST00000445140 NLRP1Q9C000 1473 aa12.97□□□□□ -0.33
FXR1-203ENST00000445140 MYO3AQ8NEV4 1616 aa12.96□□□□□ -0.33
FXR1-203ENST00000445140 ADGRB3O60242 1522 aa12.96□□□□□ -0.33
FXR1-203ENST00000445140 SETD1BQ9UPS6 1966 aaKnown RBP12.96□□□□□ -0.34
FXR1-203ENST00000445140 ZMYM3Q14202 1370 aa12.94□□□□□ -0.34
FXR1-203ENST00000445140 NCBP3Q53F19 620 aaKnown RBP12.94□□□□□ -0.34
FXR1-203ENST00000445140 TMEM131LA2VDJ0 1609 aa12.94□□□□□ -0.34
FXR1-203ENST00000445140 WASHC2CQ9Y4E1 1318 aa12.93□□□□□ -0.34
FXR1-203ENST00000445140 PTPRMP28827 1452 aa12.93□□□□□ -0.34
FXR1-203ENST00000445140 UBR1Q8IWV7 1749 aa12.92□□□□□ -0.34
FXR1-203ENST00000445140 TIMELESSQ9UNS1 1208 aa12.91□□□□□ -0.34
FXR1-203ENST00000445140 SPATA31E1Q6ZUB1 1445 aa12.9□□□□□ -0.34
FXR1-203ENST00000445140 GGT6Q6P531 493 aa12.9□□□□□ -0.34
FXR1-203ENST00000445140 TRIM52Q96A61 297 aa12.9□□□□□ -0.34
FXR1-203ENST00000445140 PPLO60437 1756 aa12.9□□□□□ -0.34
FXR1-203ENST00000445140 PKD2Q13563 968 aa12.89□□□□□ -0.35
FXR1-203ENST00000445140 A2ML1A8K2U0 1454 aa12.89□□□□□ -0.35
FXR1-203ENST00000445140 SLC52A1Q9NWF4 448 aa12.88□□□□□ -0.35
FXR1-203ENST00000445140 CEP170BQ9Y4F5 1589 aaPredicted RBP12.88□□□□□ -0.35
FXR1-203ENST00000445140 KIAA1210Q9ULL0 1709 aa12.88□□□□□ -0.35
FXR1-203ENST00000445140 SLIT1O75093 1534 aa12.88□□□□□ -0.35
FXR1-203ENST00000445140 MYOM2P54296 1465 aa12.88□□□□□ -0.35
FXR1-203ENST00000445140 ARID4BQ4LE39 1312 aaPredicted RBP12.88□□□□□ -0.35
FXR1-203ENST00000445140 CCDC144AA2RUR9 1427 aa12.87□□□□□ -0.35
FXR1-203ENST00000445140 TNRQ92752 1358 aa12.87□□□□□ -0.35
FXR1-203ENST00000445140 ZFYVE9O95405 1425 aa12.87□□□□□ -0.35
FXR1-203ENST00000445140 STAC3Q96MF2 364 aa12.87□□□□□ -0.35
FXR1-203ENST00000445140 UGGT1Q9NYU2 1555 aa12.87□□□□□ -0.35
FXR1-203ENST00000445140 SENP3Q9H4L4 574 aaPredicted RBP12.86□□□□□ -0.35
FXR1-203ENST00000445140 ARHGAP23Q9P227 1491 aa12.86□□□□□ -0.35
FXR1-203ENST00000445140 NRXN1Q9ULB1 1477 aa12.86□□□□□ -0.35
FXR1-203ENST00000445140 MYO5BQ9ULV0 1848 aa12.86□□□□□ -0.35
FXR1-203ENST00000445140 LAMC1P11047 1609 aa12.85□□□□□ -0.35
FXR1-203ENST00000445140 NEXMIFQ5QGS0 1516 aa12.85□□□□□ -0.35
FXR1-203ENST00000445140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.85□□□□□ -0.354e-6■□□□□ 10.9
FXR1-203ENST00000445140 ESF1Q9H501 851 aaKnown RBP12.85□□□□□ -0.35
FXR1-203ENST00000445140 ZBTB22O15209 634 aa12.84□□□□□ -0.35
FXR1-203ENST00000445140 UHRF1BP1Q6BDS2 1440 aa12.83□□□□□ -0.36
FXR1-203ENST00000445140 CFAP65Q6ZU64 1925 aaKnown RBP12.83□□□□□ -0.36
FXR1-203ENST00000445140 RPGRIP1LQ68CZ1 1315 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms