RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 PLXNC1O60486 1568 aa17.36■□□□□ 0.37
HDAC8-215ENST00000444609 RXRBP28702 533 aa17.35■□□□□ 0.37
HDAC8-215ENST00000444609 FAM135AQ9P2D6 1515 aa17.35■□□□□ 0.37
HDAC8-215ENST00000444609 IQGAP1P46940 1657 aa17.34■□□□□ 0.37
HDAC8-215ENST00000444609 MIA2Q96PC5 1412 aa17.33■□□□□ 0.36
HDAC8-215ENST00000444609 JCADQ9P266 1359 aa17.33■□□□□ 0.36
HDAC8-215ENST00000444609 UGGT1Q9NYU2 1555 aa17.32■□□□□ 0.36
HDAC8-215ENST00000444609 NLRP1Q9C000 1473 aa17.32■□□□□ 0.36
HDAC8-215ENST00000444609 HNRNPMP52272 730 aaKnown RBP eCLIP17.32■□□□□ 0.36
HDAC8-215ENST00000444609 PREX2Q70Z35 1606 aa17.3■□□□□ 0.36
HDAC8-215ENST00000444609 ZNF777Q9ULD5 760 aaPredicted RBP17.3■□□□□ 0.36
HDAC8-215ENST00000444609 PZPP20742 1482 aa17.3■□□□□ 0.36
HDAC8-215ENST00000444609 ATP7AQ04656 1500 aa17.29■□□□□ 0.36
HDAC8-215ENST00000444609 ZRANB1Q9UGI0 708 aa17.28■□□□□ 0.36
HDAC8-215ENST00000444609 CDK12Q9NYV4 1490 aaPredicted RBP17.28■□□□□ 0.36
HDAC8-215ENST00000444609 KDM5DQ9BY66 1539 aa17.27■□□□□ 0.36
HDAC8-215ENST00000444609 MEX3CQ5U5Q3 659 aaKnown RBP17.27■□□□□ 0.36
HDAC8-215ENST00000444609 FMN1Q68DA7 1419 aa17.27■□□□□ 0.35
HDAC8-215ENST00000444609 SPATA31A6Q5VVP1 1343 aa17.25■□□□□ 0.35
HDAC8-215ENST00000444609 ROBO1Q9Y6N7 1651 aa17.25■□□□□ 0.35
HDAC8-215ENST00000444609 FOXD1Q16676 465 aa17.24■□□□□ 0.35
HDAC8-215ENST00000444609 LRP6O75581 1613 aa17.24■□□□□ 0.35
HDAC8-215ENST00000444609 TMEM94Q12767 1356 aa17.24■□□□□ 0.35
HDAC8-215ENST00000444609 SYCP2Q9BX26 1530 aa17.23■□□□□ 0.35
HDAC8-215ENST00000444609 XIRP1Q702N8 1843 aaKnown RBP17.22■□□□□ 0.35
HDAC8-215ENST00000444609 WASHC2CQ9Y4E1 1318 aa17.21■□□□□ 0.35
HDAC8-215ENST00000444609 KIAA1107Q9UPP5 1409 aa17.21■□□□□ 0.35
HDAC8-215ENST00000444609 INO80Q9ULG1 1556 aaPredicted RBP17.21■□□□□ 0.35
HDAC8-215ENST00000444609 ZC3H13Q5T200 1668 aaKnown RBP17.2■□□□□ 0.34
HDAC8-215ENST00000444609 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
HDAC8-215ENST00000444609 LTKP29376 864 aa17.19■□□□□ 0.34
HDAC8-215ENST00000444609 SLAIN2Q9P270 581 aa17.19■□□□□ 0.34
HDAC8-215ENST00000444609 DHX29Q7Z478 1369 aaKnown RBP17.18■□□□□ 0.34
HDAC8-215ENST00000444609 KIF3BO15066 747 aa17.18■□□□□ 0.34
HDAC8-215ENST00000444609 SETBP1Q9Y6X0 1596 aa17.18■□□□□ 0.34
HDAC8-215ENST00000444609 TXNDC2Q86VQ3 553 aa17.17■□□□□ 0.34
HDAC8-215ENST00000444609 SCAF11Q99590 1463 aaKnown RBP17.17■□□□□ 0.34
HDAC8-215ENST00000444609 FGD6Q6ZV73 1430 aa17.16■□□□□ 0.34
HDAC8-215ENST00000444609 RBM33Q96EV2 1170 aaKnown RBP17.16■□□□□ 0.34
HDAC8-215ENST00000444609 KCNA6P17658 529 aa17.15■□□□□ 0.34
HDAC8-215ENST00000444609 PROSER2Q86WR7 435 aaPredicted RBP17.15■□□□□ 0.34
HDAC8-215ENST00000444609 PLEKHH2Q8IVE3 1493 aa17.14■□□□□ 0.33
HDAC8-215ENST00000444609 PHLPP1O60346 1717 aa17.14■□□□□ 0.33
HDAC8-215ENST00000444609 NUTM2BA6NNL0 878 aaPredicted RBP17.14■□□□□ 0.33
HDAC8-215ENST00000444609 NUTM2EB1AL46 878 aaPredicted RBP17.14■□□□□ 0.33
HDAC8-215ENST00000444609 NUTM2DQ5VT03 806 aaPredicted RBP17.14■□□□□ 0.33
HDAC8-215ENST00000444609 NUTM2AQ8IVF1 878 aaPredicted RBP17.14■□□□□ 0.33
HDAC8-215ENST00000444609 GPATCH8Q9UKJ3 1502 aaKnown RBP17.14■□□□□ 0.33
HDAC8-215ENST00000444609 CDC42BPAQ5VT25 1732 aa17.13■□□□□ 0.33
HDAC8-215ENST00000444609 MAP3K1Q13233 1512 aa17.13■□□□□ 0.33
HDAC8-215ENST00000444609 RGS12O14924 1447 aa17.13■□□□□ 0.33
HDAC8-215ENST00000444609 ADGBQ8N7X0 1667 aa17.12■□□□□ 0.33
HDAC8-215ENST00000444609 RBM6P78332 1123 aaKnown RBP17.11■□□□□ 0.33
HDAC8-215ENST00000444609 CFDP1Q9UEE9 299 aaPredicted RBP17.11■□□□□ 0.33
HDAC8-215ENST00000444609 AFF2P51816 1311 aa17.1■□□□□ 0.33
HDAC8-215ENST00000444609 COL16A1Q07092 1604 aaPredicted RBP17.1■□□□□ 0.33
HDAC8-215ENST00000444609 RTEL1-TNFRSF6BF6WH68 1400 aa17.09■□□□□ 0.33
HDAC8-215ENST00000444609 ARHGAP23Q9P227 1491 aa17.09■□□□□ 0.33
HDAC8-215ENST00000444609 ARHGAP35Q9NRY4 1499 aa17.08■□□□□ 0.32
HDAC8-215ENST00000444609 MSH6P52701 1360 aa17.08■□□□□ 0.32
HDAC8-215ENST00000444609 ATAD2Q6PL18 1390 aa17.08■□□□□ 0.32
HDAC8-215ENST00000444609 EID1Q9Y6B2 187 aa17.08■□□□□ 0.32
HDAC8-215ENST00000444609 QTRT2Q9H974 415 aaKnown RBP17.07■□□□□ 0.32
HDAC8-215ENST00000444609 NCOA2Q15596 1464 aa17.06■□□□□ 0.32
HDAC8-215ENST00000444609 SLIT1O75093 1534 aa17.06■□□□□ 0.32
HDAC8-215ENST00000444609 LRRIQ1Q96JM4 1722 aa17.05■□□□□ 0.32
HDAC8-215ENST00000444609 PRDM15P57071 1507 aaPredicted RBP17.05■□□□□ 0.32
HDAC8-215ENST00000444609 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
HDAC8-215ENST00000444609 ERVK-7P63135 1459 aa17.02■□□□□ 0.32
HDAC8-215ENST00000444609 CCDC18Q5T9S5 1454 aa17.02■□□□□ 0.32
HDAC8-215ENST00000444609 CCDC125Q86Z20 511 aa17.02■□□□□ 0.32
HDAC8-215ENST00000444609 EEA1Q15075 1411 aa17.02■□□□□ 0.31
HDAC8-215ENST00000444609 ZNF644Q9H582 1327 aaPredicted RBP17.01■□□□□ 0.31
HDAC8-215ENST00000444609 MBD5Q9P267 1494 aa17.01■□□□□ 0.31
HDAC8-215ENST00000444609 NGLY1Q96IV0 654 aa17.01■□□□□ 0.31
HDAC8-215ENST00000444609 UBR1Q8IWV7 1749 aa17■□□□□ 0.31
HDAC8-215ENST00000444609 SLC26A8Q96RN1 970 aa17■□□□□ 0.31
HDAC8-215ENST00000444609 ABCC3O15438 1527 aa16.99■□□□□ 0.31
HDAC8-215ENST00000444609 TIAM1Q13009 1591 aa16.98■□□□□ 0.31
HDAC8-215ENST00000444609 SHPRHQ149N8 1683 aa16.98■□□□□ 0.31
HDAC8-215ENST00000444609 NKTRP30414 1462 aaKnown RBP16.98■□□□□ 0.31
HDAC8-215ENST00000444609 IFFO2Q5TF58 517 aa16.97■□□□□ 0.31
HDAC8-215ENST00000444609 CCNB3Q8WWL7 1395 aa16.97■□□□□ 0.31
HDAC8-215ENST00000444609 TMEM2Q9UHN6 1383 aa16.97■□□□□ 0.31
HDAC8-215ENST00000444609 CASKIN1Q8WXD9 1431 aa16.96■□□□□ 0.31
HDAC8-215ENST00000444609 C8orf37Q96NL8 207 aa16.96■□□□□ 0.31
HDAC8-215ENST00000444609 UBTFP17480 764 aaKnown RBP16.95■□□□□ 0.3
HDAC8-215ENST00000444609 AHDC1Q5TGY3 1603 aaPredicted RBP16.95■□□□□ 0.3
HDAC8-215ENST00000444609 TET3O43151 1660 aa16.92■□□□□ 0.3
HDAC8-215ENST00000444609 DIP2AQ14689 1571 aa16.9■□□□□ 0.3
HDAC8-215ENST00000444609 NWD1Q149M9 1564 aa16.9■□□□□ 0.3
HDAC8-215ENST00000444609 CADPS2Q86UW7 1296 aa16.9■□□□□ 0.3
HDAC8-215ENST00000444609 LRP5O75197 1615 aa16.89■□□□□ 0.29
HDAC8-215ENST00000444609 NCOA3Q9Y6Q9 1424 aa16.88■□□□□ 0.29
HDAC8-215ENST00000444609 BRINP3Q76B58 766 aa16.88■□□□□ 0.29
HDAC8-215ENST00000444609 STAG3Q9UJ98 1225 aa16.88■□□□□ 0.29
HDAC8-215ENST00000444609 CAMSAP2Q08AD1 1489 aa16.87■□□□□ 0.29
HDAC8-215ENST00000444609 RSPH4AQ5TD94 716 aa16.87■□□□□ 0.29
HDAC8-215ENST00000444609 SETD5Q9C0A6 1442 aa16.87■□□□□ 0.29
HDAC8-215ENST00000444609 KDM5AP29375 1690 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms