RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 CHIC2Q9UKJ5 165 aa25.81■■□□□ 1.72
TSPAN9-204ENST00000444315 DUOX2Q9NRD8 1548 aa25.81■■□□□ 1.72
TSPAN9-204ENST00000444315 ABCC5O15440 1437 aa25.8■■□□□ 1.72
TSPAN9-204ENST00000444315 RRP7BPQ9NSQ0 103 aa25.8■■□□□ 1.72
TSPAN9-204ENST00000444315 EIF2AK4Q9P2K8 1649 aaKnown RBP25.8■■□□□ 1.72
TSPAN9-204ENST00000444315 KIF15Q9NS87 1388 aa25.8■■□□□ 1.72
TSPAN9-204ENST00000444315 NPATQ14207 1427 aa25.8■■□□□ 1.72
TSPAN9-204ENST00000444315 ANKRD30AQ9BXX3 1397 aa25.76■■□□□ 1.71
TSPAN9-204ENST00000444315 FAM135AQ9P2D6 1515 aa25.76■■□□□ 1.71
TSPAN9-204ENST00000444315 MYO3AQ8NEV4 1616 aa25.74■■□□□ 1.71
TSPAN9-204ENST00000444315 RNF17Q9BXT8 1623 aaKnown RBP25.74■■□□□ 1.71
TSPAN9-204ENST00000444315 ZC3H13Q5T200 1668 aaKnown RBP25.73■■□□□ 1.71
TSPAN9-204ENST00000444315 PTPRKQ15262 1439 aa25.71■■□□□ 1.71
TSPAN9-204ENST00000444315 ERBINQ96RT1 1412 aa25.71■■□□□ 1.71
TSPAN9-204ENST00000444315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.7■■□□□ 1.7
TSPAN9-204ENST00000444315 CEP152O94986 1710 aa25.7■■□□□ 1.7
TSPAN9-204ENST00000444315 DMRT2Q9Y5R5 561 aa25.68■■□□□ 1.7
TSPAN9-204ENST00000444315 PZPP20742 1482 aa25.67■■□□□ 1.7
TSPAN9-204ENST00000444315 ITGAEP38570 1179 aa25.67■■□□□ 1.7
TSPAN9-204ENST00000444315 KANK1Q14678 1352 aa25.67■■□□□ 1.7
TSPAN9-204ENST00000444315 CEP170BQ9Y4F5 1589 aaPredicted RBP25.66■■□□□ 1.7
TSPAN9-204ENST00000444315 ZNF142P52746 1687 aaPredicted RBP25.66■■□□□ 1.7
TSPAN9-204ENST00000444315 TNRQ92752 1358 aa25.66■■□□□ 1.7
TSPAN9-204ENST00000444315 ABCC3O15438 1527 aa25.65■■□□□ 1.7
TSPAN9-204ENST00000444315 CAMSAP1Q5T5Y3 1602 aa25.65■■□□□ 1.7
TSPAN9-204ENST00000444315 FBXO31Q5XUX0 539 aaPredicted RBP25.63■■□□□ 1.69
TSPAN9-204ENST00000444315 STRCQ7RTU9 1775 aa25.63■■□□□ 1.69
TSPAN9-204ENST00000444315 CFAP65Q6ZU64 1925 aaKnown RBP25.63■■□□□ 1.69
TSPAN9-204ENST00000444315 MROH1Q8NDA8 1641 aa25.61■■□□□ 1.69
TSPAN9-204ENST00000444315 NCOA1Q15788 1441 aa25.6■■□□□ 1.69
TSPAN9-204ENST00000444315 PRDM15P57071 1507 aaPredicted RBP25.59■■□□□ 1.69
TSPAN9-204ENST00000444315 A2ML1A8K2U0 1454 aa25.59■■□□□ 1.69
TSPAN9-204ENST00000444315 ADGRL2O95490 1459 aa25.59■■□□□ 1.69
TSPAN9-204ENST00000444315 DEPDC5O75140 1603 aa25.55■■□□□ 1.68
TSPAN9-204ENST00000444315 ILDR1Q86SU0 546 aaPredicted RBP25.53■■□□□ 1.68
TSPAN9-204ENST00000444315 NCKAP5LQ9HCH0 1330 aa25.53■■□□□ 1.68
TSPAN9-204ENST00000444315 ANKRD50Q9ULJ7 1429 aa25.53■■□□□ 1.68
TSPAN9-204ENST00000444315 NLRP1Q9C000 1473 aa25.52■■□□□ 1.68
TSPAN9-204ENST00000444315 ERVK-7P63135 1459 aa25.51■■□□□ 1.67
TSPAN9-204ENST00000444315 PTPRTO14522 1441 aa25.5■■□□□ 1.67
TSPAN9-204ENST00000444315 UGGT1Q9NYU2 1555 aa25.49■■□□□ 1.67
TSPAN9-204ENST00000444315 PLA2R1Q13018 1463 aa25.49■■□□□ 1.67
TSPAN9-204ENST00000444315 PKD2Q13563 968 aa25.49■■□□□ 1.67
TSPAN9-204ENST00000444315 SPATA31D1Q6ZQQ2 1576 aa25.48■■□□□ 1.67
TSPAN9-204ENST00000444315 POLR1AO95602 1720 aaPredicted RBP25.48■■□□□ 1.67
TSPAN9-204ENST00000444315 THEMISQ8N1K5 641 aaPredicted RBP25.46■■□□□ 1.67
TSPAN9-204ENST00000444315 ROCK1Q13464 1354 aa25.44■■□□□ 1.66
TSPAN9-204ENST00000444315 STAG3Q9UJ98 1225 aa25.44■■□□□ 1.66
TSPAN9-204ENST00000444315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.44■■□□□ 1.66
TSPAN9-204ENST00000444315 CERKQ8TCT0 537 aa25.43■■□□□ 1.66
TSPAN9-204ENST00000444315 FBXO41Q8TF61 875 aa25.42■■□□□ 1.66
TSPAN9-204ENST00000444315 ARHGAP31Q2M1Z3 1444 aa25.42■■□□□ 1.66
TSPAN9-204ENST00000444315 ANKLE2Q86XL3 938 aa25.41■■□□□ 1.66
TSPAN9-204ENST00000444315 LMTK2Q8IWU2 1503 aa25.4■■□□□ 1.66
TSPAN9-204ENST00000444315 EFCAB6Q5THR3 1501 aa25.39■■□□□ 1.66
TSPAN9-204ENST00000444315 RRBP1Q9P2E9 1410 aaKnown RBP25.38■■□□□ 1.65
TSPAN9-204ENST00000444315 VWDEQ8N2E2 1590 aa25.38■■□□□ 1.65
TSPAN9-204ENST00000444315 UNC13BO14795 1591 aa25.37■■□□□ 1.65
TSPAN9-204ENST00000444315 TET3O43151 1660 aa25.36■■□□□ 1.65
TSPAN9-204ENST00000444315 UBR1Q8IWV7 1749 aa25.35■■□□□ 1.65
TSPAN9-204ENST00000444315 GCC2Q8IWJ2 1684 aa25.35■■□□□ 1.65
TSPAN9-204ENST00000444315 PIK3C2BO00750 1634 aa25.33■■□□□ 1.65
TSPAN9-204ENST00000444315 NUP155O75694 1391 aa25.31■■□□□ 1.64
TSPAN9-204ENST00000444315 ZNF335Q9H4Z2 1342 aaPredicted RBP25.3■■□□□ 1.64
TSPAN9-204ENST00000444315 EID1Q9Y6B2 187 aa25.29■■□□□ 1.64
TSPAN9-204ENST00000444315 NEURL4Q96JN8 1562 aa25.29■■□□□ 1.64
TSPAN9-204ENST00000444315 IQGAP1P46940 1657 aa25.29■■□□□ 1.64
TSPAN9-204ENST00000444315 NPHP4O75161 1426 aaPredicted RBP25.29■■□□□ 1.64
TSPAN9-204ENST00000444315 RPRD2Q5VT52 1461 aaKnown RBP25.28■■□□□ 1.64
TSPAN9-204ENST00000444315 IQGAP3Q86VI3 1631 aa25.28■■□□□ 1.64
TSPAN9-204ENST00000444315 SYNMO15061 1565 aa25.27■■□□□ 1.64
TSPAN9-204ENST00000444315 LTBP4Q8N2S1 1624 aa25.24■■□□□ 1.63
TSPAN9-204ENST00000444315 CHGAP10645 457 aaKnown RBP25.24■■□□□ 1.63
TSPAN9-204ENST00000444315 TXNDC2Q86VQ3 553 aa25.24■■□□□ 1.63
TSPAN9-204ENST00000444315 E9PCH4 1651 aa25.23■■□□□ 1.63
TSPAN9-204ENST00000444315 SCAF11Q99590 1463 aaKnown RBP25.23■■□□□ 1.63
TSPAN9-204ENST00000444315 ADGRB3O60242 1522 aa25.22■■□□□ 1.63
TSPAN9-204ENST00000444315 NOS1P29475 1434 aa25.22■■□□□ 1.63
TSPAN9-204ENST00000444315 IDI1Q13907 227 aa25.22■■□□□ 1.63
TSPAN9-204ENST00000444315 BCANQ96GW7 911 aa25.22■■□□□ 1.63
TSPAN9-204ENST00000444315 SLC52A1Q9NWF4 448 aa25.22■■□□□ 1.63
TSPAN9-204ENST00000444315 TRIM52Q96A61 297 aa25.21■■□□□ 1.63
TSPAN9-204ENST00000444315 KDM5AP29375 1690 aaKnown RBP25.2■■□□□ 1.62
TSPAN9-204ENST00000444315 MED14O60244 1454 aa25.19■■□□□ 1.62
TSPAN9-204ENST00000444315 SLIT1O75093 1534 aa25.17■■□□□ 1.62
TSPAN9-204ENST00000444315 NAIPQ13075 1403 aa25.17■■□□□ 1.62
TSPAN9-204ENST00000444315 TMEM2Q9UHN6 1383 aa25.17■■□□□ 1.62
TSPAN9-204ENST00000444315 PPP1R15AO75807 674 aaPredicted RBP25.16■■□□□ 1.62
TSPAN9-204ENST00000444315 IQSEC2Q5JU85 1478 aa25.15■■□□□ 1.62
TSPAN9-204ENST00000444315 MYO5BQ9ULV0 1848 aa25.15■■□□□ 1.62
TSPAN9-204ENST00000444315 ARHGAP23Q9P227 1491 aa25.15■■□□□ 1.62
TSPAN9-204ENST00000444315 CPS1P31327 1500 aa25.14■■□□□ 1.62
TSPAN9-204ENST00000444315 LTKP29376 864 aa25.13■■□□□ 1.61
TSPAN9-204ENST00000444315 HFM1A2PYH4 1435 aa25.12■■□□□ 1.61
TSPAN9-204ENST00000444315 SENP3Q9H4L4 574 aaPredicted RBP25.12■■□□□ 1.61
TSPAN9-204ENST00000444315 SPHKAPQ2M3C7 1700 aa25.12■■□□□ 1.61
TSPAN9-204ENST00000444315 UBAP1LF5GYI3 381 aa25.11■■□□□ 1.61
TSPAN9-204ENST00000444315 HDGFP51858 240 aaKnown RBP25.11■■□□□ 1.61
TSPAN9-204ENST00000444315 SCAF1Q9H7N4 1312 aaKnown RBP25.1■■□□□ 1.61
TSPAN9-204ENST00000444315 TMEM131LA2VDJ0 1609 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms