RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 CAMSAP1Q5T5Y3 1602 aa21.83■■□□□ 1.08
TREX1-202ENST00000444177 MAST1Q9Y2H9 1570 aa21.79■■□□□ 1.08
TREX1-202ENST00000444177 PTPN23Q9H3S7 1636 aa21.79■■□□□ 1.08
TREX1-202ENST00000444177 MYO3AQ8NEV4 1616 aa21.78■■□□□ 1.08
TREX1-202ENST00000444177 PKD2Q13563 968 aa21.78■■□□□ 1.08
TREX1-202ENST00000444177 KDM5DQ9BY66 1539 aa21.78■■□□□ 1.08
TREX1-202ENST00000444177 CEP170BQ9Y4F5 1589 aaPredicted RBP21.78■■□□□ 1.08
TREX1-202ENST00000444177 TNRQ92752 1358 aa21.77■■□□□ 1.08
TREX1-202ENST00000444177 FAM135AQ9P2D6 1515 aa21.77■■□□□ 1.08
TREX1-202ENST00000444177 FGD6Q6ZV73 1430 aa21.76■■□□□ 1.07
TREX1-202ENST00000444177 A2ML1A8K2U0 1454 aa21.76■■□□□ 1.07
TREX1-202ENST00000444177 PZPP20742 1482 aa21.76■■□□□ 1.07
TREX1-202ENST00000444177 PLA2R1Q13018 1463 aa21.75■■□□□ 1.07
TREX1-202ENST00000444177 ZNF142P52746 1687 aaPredicted RBP21.75■■□□□ 1.07
TREX1-202ENST00000444177 ABCC5O15440 1437 aa21.74■■□□□ 1.07
TREX1-202ENST00000444177 CROCC2H7BZ55 1655 aa21.72■■□□□ 1.07
TREX1-202ENST00000444177 RRP7BPQ9NSQ0 103 aa21.72■■□□□ 1.07
TREX1-202ENST00000444177 TCOF1Q13428 1488 aaKnown RBP21.71■■□□□ 1.07
TREX1-202ENST00000444177 LTBP4Q8N2S1 1624 aa21.71■■□□□ 1.07
TREX1-202ENST00000444177 DUOX2Q9NRD8 1548 aa21.7■■□□□ 1.06
TREX1-202ENST00000444177 DNMT1P26358 1616 aaKnown RBP21.69■■□□□ 1.06
TREX1-202ENST00000444177 KIF15Q9NS87 1388 aa21.69■■□□□ 1.06
TREX1-202ENST00000444177 RNF17Q9BXT8 1623 aaKnown RBP21.69■■□□□ 1.06
TREX1-202ENST00000444177 THEMISQ8N1K5 641 aaPredicted RBP21.68■■□□□ 1.06
TREX1-202ENST00000444177 ZNF335Q9H4Z2 1342 aaPredicted RBP21.68■■□□□ 1.06
TREX1-202ENST00000444177 EIF2AK4Q9P2K8 1649 aaKnown RBP21.67■■□□□ 1.06
TREX1-202ENST00000444177 ABCC3O15438 1527 aa21.67■■□□□ 1.06
TREX1-202ENST00000444177 SHANK2Q9UPX8 1470 aa21.67■■□□□ 1.06
TREX1-202ENST00000444177 DAPK1P53355 1430 aa21.67■■□□□ 1.06
TREX1-202ENST00000444177 CHIC2Q9UKJ5 165 aa21.66■■□□□ 1.06
TREX1-202ENST00000444177 NLRP1Q9C000 1473 aa21.64■■□□□ 1.06
TREX1-202ENST00000444177 ANKLE2Q86XL3 938 aa21.64■■□□□ 1.05
TREX1-202ENST00000444177 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.63■■□□□ 1.05
TREX1-202ENST00000444177 MROH1Q8NDA8 1641 aa21.63■■□□□ 1.05
TREX1-202ENST00000444177 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.62■■□□□ 1.05
TREX1-202ENST00000444177 ERBINQ96RT1 1412 aa21.62■■□□□ 1.05
TREX1-202ENST00000444177 ANKRD30AQ9BXX3 1397 aa21.61■■□□□ 1.05
TREX1-202ENST00000444177 ZC3H13Q5T200 1668 aaKnown RBP21.6■■□□□ 1.05
TREX1-202ENST00000444177 IQSEC2Q5JU85 1478 aa21.6■■□□□ 1.05
TREX1-202ENST00000444177 FAM50AQ14320 339 aaKnown RBP21.6■■□□□ 1.05
TREX1-202ENST00000444177 PPARGC1BQ86YN6 1023 aaKnown RBP21.6■■□□□ 1.05
TREX1-202ENST00000444177 UGGT1Q9NYU2 1555 aa21.59■■□□□ 1.05
TREX1-202ENST00000444177 ERVK-7P63135 1459 aa21.58■■□□□ 1.05
TREX1-202ENST00000444177 SPATA31D1Q6ZQQ2 1576 aa21.58■■□□□ 1.05
TREX1-202ENST00000444177 CFAP65Q6ZU64 1925 aaKnown RBP21.57■■□□□ 1.04
TREX1-202ENST00000444177 ARHGAP31Q2M1Z3 1444 aa21.55■■□□□ 1.04
TREX1-202ENST00000444177 CEP152O94986 1710 aa21.55■■□□□ 1.04
TREX1-202ENST00000444177 KANK1Q14678 1352 aa21.55■■□□□ 1.04
TREX1-202ENST00000444177 NEURL4Q96JN8 1562 aa21.54■■□□□ 1.04
TREX1-202ENST00000444177 PRDM15P57071 1507 aaPredicted RBP21.54■■□□□ 1.04
TREX1-202ENST00000444177 UBAP1LF5GYI3 381 aa21.52■■□□□ 1.04
TREX1-202ENST00000444177 NPHP4O75161 1426 aaPredicted RBP21.52■■□□□ 1.04
TREX1-202ENST00000444177 POLR1AO95602 1720 aaPredicted RBP21.52■■□□□ 1.03
TREX1-202ENST00000444177 MED14O60244 1454 aa21.52■■□□□ 1.03
TREX1-202ENST00000444177 ADGRL2O95490 1459 aa21.5■■□□□ 1.03
TREX1-202ENST00000444177 DEPDC5O75140 1603 aa21.49■■□□□ 1.03
TREX1-202ENST00000444177 LMTK2Q8IWU2 1503 aa21.45■■□□□ 1.02
TREX1-202ENST00000444177 LTKP29376 864 aa21.45■■□□□ 1.02
TREX1-202ENST00000444177 TXNDC2Q86VQ3 553 aa21.45■■□□□ 1.02
TREX1-202ENST00000444177 ANKRD50Q9ULJ7 1429 aa21.45■■□□□ 1.02
TREX1-202ENST00000444177 VWDEQ8N2E2 1590 aa21.44■■□□□ 1.02
TREX1-202ENST00000444177 IDI1Q13907 227 aa21.44■■□□□ 1.02
TREX1-202ENST00000444177 CPS1P31327 1500 aa21.44■■□□□ 1.02
TREX1-202ENST00000444177 STAG3Q9UJ98 1225 aa21.43■■□□□ 1.02
TREX1-202ENST00000444177 UBR1Q8IWV7 1749 aa21.43■■□□□ 1.02
TREX1-202ENST00000444177 EID1Q9Y6B2 187 aa21.41■■□□□ 1.02
TREX1-202ENST00000444177 ARHGAP23Q9P227 1491 aa21.4■■□□□ 1.02
TREX1-202ENST00000444177 ITGAEP38570 1179 aa21.4■■□□□ 1.02
TREX1-202ENST00000444177 IQGAP1P46940 1657 aa21.4■■□□□ 1.02
TREX1-202ENST00000444177 SCAF11Q99590 1463 aaKnown RBP21.39■■□□□ 1.02
TREX1-202ENST00000444177 TOM1O60784 492 aa21.39■■□□□ 1.01
TREX1-202ENST00000444177 SLIT1O75093 1534 aa21.39■■□□□ 1.01
TREX1-202ENST00000444177 NOS1P29475 1434 aa21.38■■□□□ 1.01
TREX1-202ENST00000444177 RRBP1Q9P2E9 1410 aaKnown RBP21.38■■□□□ 1.01
TREX1-202ENST00000444177 TMEM2Q9UHN6 1383 aa21.37■■□□□ 1.01
TREX1-202ENST00000444177 SLC52A1Q9NWF4 448 aa21.37■■□□□ 1.01
TREX1-202ENST00000444177 PIP4K2BP78356 416 aa21.36■■□□□ 1.01
TREX1-202ENST00000444177 PIK3C2BO00750 1634 aa21.36■■□□□ 1.01
TREX1-202ENST00000444177 ROCK1Q13464 1354 aa21.36■■□□□ 1.01
TREX1-202ENST00000444177 DISP3Q9P2K9 1392 aa21.36■■□□□ 1.01
TREX1-202ENST00000444177 EFCAB6Q5THR3 1501 aa21.35■■□□□ 1.01
TREX1-202ENST00000444177 SCAF1Q9H7N4 1312 aaKnown RBP21.34■■□□□ 1.01
TREX1-202ENST00000444177 SYNMO15061 1565 aa21.33■■□□□ 1.01
TREX1-202ENST00000444177 RPRD2Q5VT52 1461 aaKnown RBP21.31■■□□□ 1
TREX1-202ENST00000444177 LRRC7Q96NW7 1537 aa21.3■■□□□ 1
TREX1-202ENST00000444177 UNC13BO14795 1591 aa21.3■■□□□ 1
TREX1-202ENST00000444177 STRCP1A6NGW2 1772 aa21.3■■□□□ 1
TREX1-202ENST00000444177 HSPA1LP34931 641 aa21.29■■□□□ 1
TREX1-202ENST00000444177 KDM5AP29375 1690 aaKnown RBP21.28■■□□□ 1
TREX1-202ENST00000444177 TET3O43151 1660 aa21.26■□□□□ 0.99
TREX1-202ENST00000444177 SLC26A8Q96RN1 970 aa21.26■□□□□ 0.99
TREX1-202ENST00000444177 NUP155O75694 1391 aa21.25■□□□□ 0.99
TREX1-202ENST00000444177 ILDR2Q71H61 639 aa21.25■□□□□ 0.99
TREX1-202ENST00000444177 ADGRB3O60242 1522 aa21.24■□□□□ 0.99
TREX1-202ENST00000444177 KCNA6P17658 529 aa21.23■□□□□ 0.99
TREX1-202ENST00000444177 BCANQ96GW7 911 aa21.23■□□□□ 0.99
TREX1-202ENST00000444177 HDGFP51858 240 aaKnown RBP21.22■□□□□ 0.99
TREX1-202ENST00000444177 ALKQ9UM73 1620 aa21.22■□□□□ 0.99
TREX1-202ENST00000444177 CHGAP10645 457 aaKnown RBP21.21■□□□□ 0.99
TREX1-202ENST00000444177 GCC2Q8IWJ2 1684 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms