RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 PRKRIP1Q9H875 184 aaPredicted RBP22.44■■□□□ 1.18
PIKFYVE-206ENST00000443896 ERBINQ96RT1 1412 aa22.44■■□□□ 1.18
PIKFYVE-206ENST00000443896 ARAP3Q8WWN8 1544 aa22.44■■□□□ 1.18
PIKFYVE-206ENST00000443896 MAGI2Q86UL8 1455 aa22.44■■□□□ 1.18
PIKFYVE-206ENST00000443896 ARID4BQ4LE39 1312 aaPredicted RBP22.41■■□□□ 1.18
PIKFYVE-206ENST00000443896 CCDC144AA2RUR9 1427 aa22.41■■□□□ 1.18
PIKFYVE-206ENST00000443896 PLA2R1Q13018 1463 aa22.41■■□□□ 1.18
PIKFYVE-206ENST00000443896 TRAPPC8Q9Y2L5 1435 aa22.39■■□□□ 1.17
PIKFYVE-206ENST00000443896 DCAF11Q8TEB1 546 aa22.39■■□□□ 1.17
PIKFYVE-206ENST00000443896 ANO8Q9HCE9 1232 aaPredicted RBP22.38■■□□□ 1.17
PIKFYVE-206ENST00000443896 CARD11Q9BXL7 1154 aa22.37■■□□□ 1.17
PIKFYVE-206ENST00000443896 WDR7Q9Y4E6 1490 aa22.37■■□□□ 1.17
PIKFYVE-206ENST00000443896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.36■■□□□ 1.176e-7■■□□□ 12.6
PIKFYVE-206ENST00000443896 KDM2AQ9Y2K7 1162 aa22.36■■□□□ 1.17
PIKFYVE-206ENST00000443896 ATP10AO60312 1499 aa22.36■■□□□ 1.17
PIKFYVE-206ENST00000443896 MSH5O43196 834 aa22.35■■□□□ 1.17
PIKFYVE-206ENST00000443896 CCDC184Q52MB2 194 aa22.35■■□□□ 1.17
PIKFYVE-206ENST00000443896 RTEL1-TNFRSF6BF6WH68 1400 aa22.35■■□□□ 1.17
PIKFYVE-206ENST00000443896 DHX29Q7Z478 1369 aaKnown RBP22.34■■□□□ 1.17
PIKFYVE-206ENST00000443896 HNRNPUQ00839 825 aaKnown RBP eCLIP22.34■■□□□ 1.17
PIKFYVE-206ENST00000443896 PRAG1Q86YV5 1406 aa22.33■■□□□ 1.17
PIKFYVE-206ENST00000443896 TRPM1Q7Z4N2 1603 aa22.32■■□□□ 1.16
PIKFYVE-206ENST00000443896 ZFYVE16Q7Z3T8 1539 aa22.32■■□□□ 1.16
PIKFYVE-206ENST00000443896 ROCK2O75116 1388 aaKnown RBP22.31■■□□□ 1.16
PIKFYVE-206ENST00000443896 ABCA9Q8IUA7 1624 aa22.31■■□□□ 1.16
PIKFYVE-206ENST00000443896 ERICH6Q7L0X2 663 aa22.3■■□□□ 1.16
PIKFYVE-206ENST00000443896 A2MP01023 1474 aa22.3■■□□□ 1.16
PIKFYVE-206ENST00000443896 SPAG9O60271 1321 aaKnown RBP22.29■■□□□ 1.16
PIKFYVE-206ENST00000443896 MRS2Q9HD23 443 aa22.28■■□□□ 1.16
PIKFYVE-206ENST00000443896 ST20-MTHFSA0A0A6YYL1 179 aa22.27■■□□□ 1.16
PIKFYVE-206ENST00000443896 FANCAO15360 1455 aa22.26■■□□□ 1.15
PIKFYVE-206ENST00000443896 AFAP1Q8N556 730 aa22.26■■□□□ 1.15
PIKFYVE-206ENST00000443896 GPRASP1Q5JY77 1395 aa22.25■■□□□ 1.15
PIKFYVE-206ENST00000443896 NEFLP07196 543 aa22.25■■□□□ 1.15
PIKFYVE-206ENST00000443896 LAMC1P11047 1609 aa22.24■■□□□ 1.15
PIKFYVE-206ENST00000443896 RGL3Q3MIN7 710 aa22.24■■□□□ 1.15
PIKFYVE-206ENST00000443896 POLR3GLQ9BT43 218 aa22.24■■□□□ 1.15
PIKFYVE-206ENST00000443896 INO80Q9ULG1 1556 aaPredicted RBP22.24■■□□□ 1.15
PIKFYVE-206ENST00000443896 DEPDC5O75140 1603 aa22.23■■□□□ 1.15
PIKFYVE-206ENST00000443896 EIF2AK4Q9P2K8 1649 aaKnown RBP22.22■■□□□ 1.15
PIKFYVE-206ENST00000443896 ATP7AQ04656 1500 aa22.21■■□□□ 1.15
PIKFYVE-206ENST00000443896 ASXL2Q76L83 1435 aa22.21■■□□□ 1.15
PIKFYVE-206ENST00000443896 E9PCH4 1651 aa22.21■■□□□ 1.15
PIKFYVE-206ENST00000443896 FAM9BQ8IZU0 186 aa22.21■■□□□ 1.15
PIKFYVE-206ENST00000443896 PRDM15P57071 1507 aaPredicted RBP22.19■■□□□ 1.14
PIKFYVE-206ENST00000443896 CCDC136Q96JN2 1154 aa22.19■■□□□ 1.14
PIKFYVE-206ENST00000443896 ADGRL1O94910 1474 aa22.18■■□□□ 1.14
PIKFYVE-206ENST00000443896 NBPF1Q3BBV0 1214 aa22.18■■□□□ 1.14
PIKFYVE-206ENST00000443896 TRPM2O94759 1503 aa22.17■■□□□ 1.14
PIKFYVE-206ENST00000443896 ZBED9Q6R2W3 1325 aa22.16■■□□□ 1.14
PIKFYVE-206ENST00000443896 SCAPERQ9BY12 1400 aa22.15■■□□□ 1.14
PIKFYVE-206ENST00000443896 VWDEQ8N2E2 1590 aa22.15■■□□□ 1.14
PIKFYVE-206ENST00000443896 PTPRTO14522 1441 aa22.15■■□□□ 1.14
PIKFYVE-206ENST00000443896 TET3O43151 1660 aa22.15■■□□□ 1.14
PIKFYVE-206ENST00000443896 SPHKAPQ2M3C7 1700 aa22.13■■□□□ 1.13
PIKFYVE-206ENST00000443896 OSCARQ8IYS5 282 aa22.12■■□□□ 1.13
PIKFYVE-206ENST00000443896 RNF17Q9BXT8 1623 aaKnown RBP22.12■■□□□ 1.13
PIKFYVE-206ENST00000443896 DEKP35659 375 aaKnown RBP22.11■■□□□ 1.13
PIKFYVE-206ENST00000443896 KTN1Q86UP2 1357 aaKnown RBP22.11■■□□□ 1.13
PIKFYVE-206ENST00000443896 CEP152O94986 1710 aa22.11■■□□□ 1.13
PIKFYVE-206ENST00000443896 COL17A1Q9UMD9 1497 aaPredicted RBP22.1■■□□□ 1.13
PIKFYVE-206ENST00000443896 KANK1Q14678 1352 aa22.09■■□□□ 1.13
PIKFYVE-206ENST00000443896 CLTCL1P53675 1640 aa22.08■■□□□ 1.13
PIKFYVE-206ENST00000443896 MADDQ8WXG6 1647 aa22.08■■□□□ 1.13
PIKFYVE-206ENST00000443896 TESK2Q96S53 571 aa22.08■■□□□ 1.12
PIKFYVE-206ENST00000443896 MROH1Q8NDA8 1641 aa22.08■■□□□ 1.12
PIKFYVE-206ENST00000443896 SALL2Q9Y467 1007 aaPredicted RBP22.07■■□□□ 1.12
PIKFYVE-206ENST00000443896 KIDINS220Q9ULH0 1771 aa22.06■■□□□ 1.12
PIKFYVE-206ENST00000443896 CNGB1Q14028 1251 aaPredicted RBP22.06■■□□□ 1.12
PIKFYVE-206ENST00000443896 RALBP1Q15311 655 aa22.05■■□□□ 1.12
PIKFYVE-206ENST00000443896 KIF3BO15066 747 aa22.05■■□□□ 1.12
PIKFYVE-206ENST00000443896 NPM1P06748 294 aaKnown RBP eCLIP22.05■■□□□ 1.12
PIKFYVE-206ENST00000443896 STAC3Q96MF2 364 aa22.05■■□□□ 1.12
PIKFYVE-206ENST00000443896 ZNF518AQ6AHZ1 1483 aa22.05■■□□□ 1.12
PIKFYVE-206ENST00000443896 IRX6P78412 446 aaPredicted RBP22.04■■□□□ 1.12
PIKFYVE-206ENST00000443896 NBR1Q14596 966 aa22.04■■□□□ 1.12
PIKFYVE-206ENST00000443896 NEURL4Q96JN8 1562 aa22.04■■□□□ 1.12
PIKFYVE-206ENST00000443896 DISP3Q9P2K9 1392 aa22.03■■□□□ 1.12
PIKFYVE-206ENST00000443896 PNISRQ8TF01 805 aaKnown RBP22.03■■□□□ 1.12
PIKFYVE-206ENST00000443896 MYBBP1AQ9BQG0 1328 aaKnown RBP22.02■■□□□ 1.12
PIKFYVE-206ENST00000443896 MYT1LQ9UL68 1186 aa22.02■■□□□ 1.12
PIKFYVE-206ENST00000443896 BRD4O60885 1362 aaPredicted RBP22.02■■□□□ 1.12
PIKFYVE-206ENST00000443896 CFAP74Q9C0B2 1584 aa22.02■■□□□ 1.12
PIKFYVE-206ENST00000443896 RTN4Q9NQC3 1192 aaKnown RBP22.01■■□□□ 1.11
PIKFYVE-206ENST00000443896 TMC1Q8TDI8 760 aa22■■□□□ 1.11
PIKFYVE-206ENST00000443896 IQGAP1P46940 1657 aa22■■□□□ 1.11
PIKFYVE-206ENST00000443896 PER1O15534 1290 aaPredicted RBP21.99■■□□□ 1.11
PIKFYVE-206ENST00000443896 CD109Q6YHK3 1445 aa21.99■■□□□ 1.11
PIKFYVE-206ENST00000443896 PARD3Q8TEW0 1356 aa21.98■■□□□ 1.11
PIKFYVE-206ENST00000443896 EFCAB6Q5THR3 1501 aa21.98■■□□□ 1.11
PIKFYVE-206ENST00000443896 TMF1P82094 1093 aa21.98■■□□□ 1.11
PIKFYVE-206ENST00000443896 LRPPRCP42704 1394 aaKnown RBP21.97■■□□□ 1.11
PIKFYVE-206ENST00000443896 LMTK2Q8IWU2 1503 aa21.97■■□□□ 1.11
PIKFYVE-206ENST00000443896 ERICH6BQ5W0A0 696 aa21.97■■□□□ 1.11
PIKFYVE-206ENST00000443896 POGZQ7Z3K3 1410 aa21.97■■□□□ 1.11
PIKFYVE-206ENST00000443896 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.96■■□□□ 1.11
PIKFYVE-206ENST00000443896 WASHC2CQ9Y4E1 1318 aa21.96■■□□□ 1.11
PIKFYVE-206ENST00000443896 SMG6Q86US8 1419 aaKnown RBP21.95■■□□□ 1.1
PIKFYVE-206ENST00000443896 PPRC1Q5VV67 1664 aaKnown RBP21.94■■□□□ 1.1
PIKFYVE-206ENST00000443896 MLH3Q9UHC1 1453 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms