RNA–Protein interactions for RNA: ENST00000443796.5

EPHA4-209, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 584 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-209ENST00000443796 PPRC1Q5VV67 1664 aaKnown RBP12.35□□□□□ -0.43
EPHA4-209ENST00000443796 TMC2Q8TDI7 906 aa12.35□□□□□ -0.43
EPHA4-209ENST00000443796 LARP6Q9BRS8 491 aaKnown RBP12.34□□□□□ -0.43
EPHA4-209ENST00000443796 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.34□□□□□ -0.43
EPHA4-209ENST00000443796 NCKAP5LQ9HCH0 1330 aa12.33□□□□□ -0.44
EPHA4-209ENST00000443796 COL17A1Q9UMD9 1497 aaPredicted RBP12.33□□□□□ -0.44
EPHA4-209ENST00000443796 POTEJP0CG39 1038 aa12.31□□□□□ -0.44
EPHA4-209ENST00000443796 CRISPLD2Q9H0B8 497 aa12.31□□□□□ -0.44
EPHA4-209ENST00000443796 TOP2BQ02880 1626 aa12.29□□□□□ -0.44
EPHA4-209ENST00000443796 BIVM-ERCC5R4GMW8 1640 aa12.29□□□□□ -0.44
EPHA4-209ENST00000443796 MAMSTRQ6ZN01 415 aa12.29□□□□□ -0.44
EPHA4-209ENST00000443796 SCUBE2Q9NQ36 999 aa12.29□□□□□ -0.44
EPHA4-209ENST00000443796 GPHNQ9NQX3 736 aaPredicted RBP12.29□□□□□ -0.44
EPHA4-209ENST00000443796 GLI2P10070 1586 aa12.28□□□□□ -0.44
EPHA4-209ENST00000443796 C2orf72A6NCS6 295 aa12.28□□□□□ -0.44
EPHA4-209ENST00000443796 TMEM92Q6UXU6 159 aa12.27□□□□□ -0.45
EPHA4-209ENST00000443796 DDX27Q96GQ7 796 aaKnown RBP12.27□□□□□ -0.45
EPHA4-209ENST00000443796 ASXL2Q76L83 1435 aa12.27□□□□□ -0.45
EPHA4-209ENST00000443796 LHX8Q68G74 356 aa12.25□□□□□ -0.45
EPHA4-209ENST00000443796 PLB1Q6P1J6 1458 aa12.24□□□□□ -0.45
EPHA4-209ENST00000443796 ABCC2Q92887 1545 aa12.24□□□□□ -0.45
EPHA4-209ENST00000443796 KIAA0586Q9BVV6 1533 aa12.24□□□□□ -0.45
EPHA4-209ENST00000443796 PTPRGP23470 1445 aa12.23□□□□□ -0.45
EPHA4-209ENST00000443796 PPP1R15BQ5SWA1 713 aa12.23□□□□□ -0.45
EPHA4-209ENST00000443796 DSG2Q14126 1118 aa12.22□□□□□ -0.45
EPHA4-209ENST00000443796 MFSD10Q14728 455 aa12.22□□□□□ -0.45
EPHA4-209ENST00000443796 SLAIN1Q8ND83 568 aa12.22□□□□□ -0.45
EPHA4-209ENST00000443796 KIF3CO14782 793 aa12.21□□□□□ -0.45
EPHA4-209ENST00000443796 MAP3K4Q9Y6R4 1608 aa12.21□□□□□ -0.46
EPHA4-209ENST00000443796 TTBK1Q5TCY1 1321 aaPredicted RBP12.2□□□□□ -0.46
EPHA4-209ENST00000443796 FOXK1P85037 733 aa12.2□□□□□ -0.46
EPHA4-209ENST00000443796 PLPP6Q8IY26 295 aa12.2□□□□□ -0.46
EPHA4-209ENST00000443796 LMTK3Q96Q04 1460 aa12.2□□□□□ -0.46
EPHA4-209ENST00000443796 CUL7Q14999 1698 aa12.19□□□□□ -0.46
EPHA4-209ENST00000443796 EPRSP07814 1512 aaKnown RBP12.19□□□□□ -0.46
EPHA4-209ENST00000443796 E2F4Q16254 413 aa12.18□□□□□ -0.46
EPHA4-209ENST00000443796 TEX14Q8IWB6 1497 aa12.18□□□□□ -0.46
EPHA4-209ENST00000443796 UHRF1BP1LA0JNW5 1464 aa12.16□□□□□ -0.46
EPHA4-209ENST00000443796 TNIKQ9UKE5 1360 aa12.16□□□□□ -0.46
EPHA4-209ENST00000443796 P3H3Q8IVL6 736 aa12.14□□□□□ -0.47
EPHA4-209ENST00000443796 OTUD5Q96G74 571 aa12.14□□□□□ -0.47
EPHA4-209ENST00000443796 IGF1RP08069 1367 aa12.13□□□□□ -0.47
EPHA4-209ENST00000443796 UACAQ9BZF9 1416 aa12.12□□□□□ -0.47
EPHA4-209ENST00000443796 KCNV2Q8TDN2 545 aa12.12□□□□□ -0.47
EPHA4-209ENST00000443796 CARMIL2Q6F5E8 1435 aa12.11□□□□□ -0.47
EPHA4-209ENST00000443796 KDM5BQ9UGL1 1544 aa12.11□□□□□ -0.47
EPHA4-209ENST00000443796 KIF21BO75037 1637 aa12.11□□□□□ -0.47
EPHA4-209ENST00000443796 ILDR2Q71H61 639 aa12.1□□□□□ -0.47
EPHA4-209ENST00000443796 ZCCHC11Q5TAX3 1644 aaKnown RBP12.09□□□□□ -0.47
EPHA4-209ENST00000443796 SOCS7O14512 581 aa12.09□□□□□ -0.47
EPHA4-209ENST00000443796 CAMK2BQ13554 666 aa12.09□□□□□ -0.47
EPHA4-209ENST00000443796 UPF1Q92900 1129 aaKnown RBP eCLIP12.08□□□□□ -0.48
EPHA4-209ENST00000443796 PTPRMP28827 1452 aa12.07□□□□□ -0.48
EPHA4-209ENST00000443796 EMILIN3Q9NT22 766 aa12.06□□□□□ -0.48
EPHA4-209ENST00000443796 DISP1Q96F81 1524 aa12.06□□□□□ -0.48
EPHA4-209ENST00000443796 MAGI3Q5TCQ9 1506 aa12.05□□□□□ -0.48
EPHA4-209ENST00000443796 ADAMTSL3P82987 1691 aa12.04□□□□□ -0.48
EPHA4-209ENST00000443796 WDR7Q9Y4E6 1490 aa12.04□□□□□ -0.48
EPHA4-209ENST00000443796 ARHGEF1Q92888 912 aaKnown RBP12.04□□□□□ -0.48
EPHA4-209ENST00000443796 PCF11O94913 1555 aaKnown RBP12.04□□□□□ -0.48
EPHA4-209ENST00000443796 IQGAP2Q13576 1575 aa12.04□□□□□ -0.48
EPHA4-209ENST00000443796 MAP3K9P80192 1104 aa12.03□□□□□ -0.48
EPHA4-209ENST00000443796 NBR1Q14596 966 aa12.03□□□□□ -0.48
EPHA4-209ENST00000443796 DOK7Q18PE1 504 aa12.03□□□□□ -0.48
EPHA4-209ENST00000443796 DISP3Q9P2K9 1392 aa12.03□□□□□ -0.48
EPHA4-209ENST00000443796 CD109Q6YHK3 1445 aa12.03□□□□□ -0.48
EPHA4-209ENST00000443796 DPYSL4O14531 572 aa12.02□□□□□ -0.49
EPHA4-209ENST00000443796 SNPHO15079 494 aa12.02□□□□□ -0.49
EPHA4-209ENST00000443796 KIF27Q86VH2 1401 aa12.02□□□□□ -0.49
EPHA4-209ENST00000443796 CFAP43Q8NDM7 1665 aa12.01□□□□□ -0.49
EPHA4-209ENST00000443796 TBC1D12O60347 775 aa12.01□□□□□ -0.49
EPHA4-209ENST00000443796 ZNF710Q8N1W2 664 aa12□□□□□ -0.49
EPHA4-209ENST00000443796 OXER1Q8TDS5 423 aa12□□□□□ -0.49
EPHA4-209ENST00000443796 CARMIL1Q5VZK9 1371 aa12□□□□□ -0.49
EPHA4-209ENST00000443796 RIMBP2O15034 1052 aa11.99□□□□□ -0.49
EPHA4-209ENST00000443796 SLC34A2O95436 690 aa11.99□□□□□ -0.49
EPHA4-209ENST00000443796 HOXB3P14651 431 aaPredicted RBP11.99□□□□□ -0.49
EPHA4-209ENST00000443796 BCANQ96GW7 911 aa11.99□□□□□ -0.49
EPHA4-209ENST00000443796 SUPT5HO00267 1087 aaKnown RBP11.98□□□□□ -0.49
EPHA4-209ENST00000443796 CERKQ8TCT0 537 aa11.98□□□□□ -0.49
EPHA4-209ENST00000443796 ARAP3Q8WWN8 1544 aa11.97□□□□□ -0.49
EPHA4-209ENST00000443796 PTCD2Q8WV60 388 aaKnown RBP11.97□□□□□ -0.49
EPHA4-209ENST00000443796 KCNH8Q96L42 1107 aa11.97□□□□□ -0.49
EPHA4-209ENST00000443796 ARIH1Q9Y4X5 557 aaPredicted RBP11.97□□□□□ -0.49
EPHA4-209ENST00000443796 PCDHGA4Q9Y5G9 962 aa11.96□□□□□ -0.49
EPHA4-209ENST00000443796 MADDQ8WXG6 1647 aa11.96□□□□□ -0.5
EPHA4-209ENST00000443796 UGGT2Q9NYU1 1516 aa11.96□□□□□ -0.5
EPHA4-209ENST00000443796 BCORL1Q5H9F3 1711 aa11.95□□□□□ -0.5
EPHA4-209ENST00000443796 HSPA2P54652 639 aa11.95□□□□□ -0.5
EPHA4-209ENST00000443796 KIAA0556O60303 1618 aa11.95□□□□□ -0.5
EPHA4-209ENST00000443796 ARSIQ5FYB1 569 aa11.93□□□□□ -0.5
EPHA4-209ENST00000443796 ZNF316A6NFI3 1004 aaPredicted RBP11.92□□□□□ -0.5
EPHA4-209ENST00000443796 SPDYE16A6NNV3 312 aaPredicted RBP11.92□□□□□ -0.5
EPHA4-209ENST00000443796 EVI5O60447 810 aa11.91□□□□□ -0.5
EPHA4-209ENST00000443796 SEMA3EO15041 775 aa11.9□□□□□ -0.5
EPHA4-209ENST00000443796 RAPGEF3O95398 923 aa11.9□□□□□ -0.5
EPHA4-209ENST00000443796 KHSRPQ92945 711 aaKnown RBP eCLIP11.9□□□□□ -0.5
EPHA4-209ENST00000443796 ZSWIM6Q9HCJ5 1215 aa11.9□□□□□ -0.5
EPHA4-209ENST00000443796 SPATA31D1Q6ZQQ2 1576 aa11.89□□□□□ -0.51
EPHA4-209ENST00000443796 PDIA6Q15084 440 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms