RNA–Protein interactions for RNA: ENST00000443677.6

RNF135-204, Transcript of ring finger protein 135, humanhuman

TSL 1 (best) BASIC

Gene RNF135, Length 1,261 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135-204ENST00000443677 PTPRTO14522 1441 aa30.31■■■□□ 2.44
RNF135-204ENST00000443677 ABCC5O15440 1437 aa30.3■■■□□ 2.44
RNF135-204ENST00000443677 NCOA1Q15788 1441 aa30.29■■■□□ 2.44
RNF135-204ENST00000443677 WASHC2CQ9Y4E1 1318 aa30.28■■■□□ 2.44
RNF135-204ENST00000443677 MAST1Q9Y2H9 1570 aa30.28■■■□□ 2.44
RNF135-204ENST00000443677 CAMSAP1Q5T5Y3 1602 aa30.27■■■□□ 2.44
RNF135-204ENST00000443677 DAPK1P53355 1430 aa30.26■■■□□ 2.43
RNF135-204ENST00000443677 MYO3AQ8NEV4 1616 aa30.25■■■□□ 2.43
RNF135-204ENST00000443677 FAM135AQ9P2D6 1515 aa30.23■■■□□ 2.43
RNF135-204ENST00000443677 DNMT1P26358 1616 aaKnown RBP30.23■■■□□ 2.43
RNF135-204ENST00000443677 KDM5DQ9BY66 1539 aa30.22■■■□□ 2.43
RNF135-204ENST00000443677 ZNF142P52746 1687 aaPredicted RBP30.22■■■□□ 2.43
RNF135-204ENST00000443677 CEP170BQ9Y4F5 1589 aaPredicted RBP30.21■■■□□ 2.43
RNF135-204ENST00000443677 SHANK2Q9UPX8 1470 aa30.21■■■□□ 2.43
RNF135-204ENST00000443677 NCKAP5LQ9HCH0 1330 aa30.2■■■□□ 2.42
RNF135-204ENST00000443677 FBXO31Q5XUX0 539 aaPredicted RBP30.19■■■□□ 2.42
RNF135-204ENST00000443677 PKD2Q13563 968 aa30.17■■■□□ 2.42
RNF135-204ENST00000443677 CHIC2Q9UKJ5 165 aa30.17■■■□□ 2.42
RNF135-204ENST00000443677 PZPP20742 1482 aa30.17■■■□□ 2.42
RNF135-204ENST00000443677 CROCC2H7BZ55 1655 aa30.17■■■□□ 2.42
RNF135-204ENST00000443677 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.15■■■□□ 2.42
RNF135-204ENST00000443677 PLA2R1Q13018 1463 aa30.15■■■□□ 2.42
RNF135-204ENST00000443677 A2ML1A8K2U0 1454 aa30.14■■■□□ 2.42
RNF135-204ENST00000443677 RRP7BPQ9NSQ0 103 aa30.14■■■□□ 2.42
RNF135-204ENST00000443677 TNRQ92752 1358 aa30.14■■■□□ 2.41
RNF135-204ENST00000443677 ANKRD30AQ9BXX3 1397 aa30.12■■■□□ 2.41
RNF135-204ENST00000443677 RNF17Q9BXT8 1623 aaKnown RBP30.11■■■□□ 2.41
RNF135-204ENST00000443677 EIF2AK4Q9P2K8 1649 aaKnown RBP30.11■■■□□ 2.41
RNF135-204ENST00000443677 KIF15Q9NS87 1388 aa30.1■■■□□ 2.41
RNF135-204ENST00000443677 RRBP1Q9P2E9 1410 aaKnown RBP30.1■■■□□ 2.41
RNF135-204ENST00000443677 DUOX2Q9NRD8 1548 aa30.09■■■□□ 2.41
RNF135-204ENST00000443677 LTBP4Q8N2S1 1624 aa30.07■■■□□ 2.4
RNF135-204ENST00000443677 ABCC3O15438 1527 aa30.05■■■□□ 2.4
RNF135-204ENST00000443677 ADGRL2O95490 1459 aa30.05■■■□□ 2.4
RNF135-204ENST00000443677 ZC3H13Q5T200 1668 aaKnown RBP30.04■■■□□ 2.4
RNF135-204ENST00000443677 ITGAEP38570 1179 aa30.04■■■□□ 2.4
RNF135-204ENST00000443677 THEMISQ8N1K5 641 aaPredicted RBP30.02■■■□□ 2.4
RNF135-204ENST00000443677 NLRP1Q9C000 1473 aa30.01■■■□□ 2.4
RNF135-204ENST00000443677 ERBINQ96RT1 1412 aa30■■■□□ 2.39
RNF135-204ENST00000443677 MROH1Q8NDA8 1641 aa30■■■□□ 2.39
RNF135-204ENST00000443677 ZNF335Q9H4Z2 1342 aaPredicted RBP29.99■■■□□ 2.39
RNF135-204ENST00000443677 IQSEC2Q5JU85 1478 aa29.96■■■□□ 2.39
RNF135-204ENST00000443677 ROCK1Q13464 1354 aa29.96■■■□□ 2.39
RNF135-204ENST00000443677 ANKLE2Q86XL3 938 aa29.96■■■□□ 2.39
RNF135-204ENST00000443677 UGGT1Q9NYU2 1555 aa29.95■■■□□ 2.39
RNF135-204ENST00000443677 SPATA31D1Q6ZQQ2 1576 aa29.94■■■□□ 2.38
RNF135-204ENST00000443677 CEP152O94986 1710 aa29.93■■■□□ 2.38
RNF135-204ENST00000443677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.93■■■□□ 2.38
RNF135-204ENST00000443677 POLR1AO95602 1720 aaPredicted RBP29.93■■■□□ 2.38
RNF135-204ENST00000443677 ERVK-7P63135 1459 aa29.91■■■□□ 2.38
RNF135-204ENST00000443677 CFAP65Q6ZU64 1925 aaKnown RBP29.9■■■□□ 2.38
RNF135-204ENST00000443677 PRDM15P57071 1507 aaPredicted RBP29.9■■■□□ 2.38
RNF135-204ENST00000443677 ANKRD50Q9ULJ7 1429 aa29.89■■■□□ 2.38
RNF135-204ENST00000443677 KANK1Q14678 1352 aa29.88■■■□□ 2.37
RNF135-204ENST00000443677 NEURL4Q96JN8 1562 aa29.87■■■□□ 2.37
RNF135-204ENST00000443677 ARHGAP31Q2M1Z3 1444 aa29.86■■■□□ 2.37
RNF135-204ENST00000443677 DEPDC5O75140 1603 aa29.85■■■□□ 2.37
RNF135-204ENST00000443677 MED14O60244 1454 aa29.8■■■□□ 2.36
RNF135-204ENST00000443677 NPHP4O75161 1426 aaPredicted RBP29.8■■■□□ 2.36
RNF135-204ENST00000443677 UBAP1LF5GYI3 381 aa29.78■■■□□ 2.36
RNF135-204ENST00000443677 UBR1Q8IWV7 1749 aa29.76■■■□□ 2.35
RNF135-204ENST00000443677 CPS1P31327 1500 aa29.74■■■□□ 2.35
RNF135-204ENST00000443677 LMTK2Q8IWU2 1503 aa29.74■■■□□ 2.35
RNF135-204ENST00000443677 VWDEQ8N2E2 1590 aa29.73■■■□□ 2.35
RNF135-204ENST00000443677 IQGAP1P46940 1657 aa29.72■■■□□ 2.35
RNF135-204ENST00000443677 NAIPQ13075 1403 aa29.71■■■□□ 2.35
RNF135-204ENST00000443677 TXNDC2Q86VQ3 553 aa29.69■■■□□ 2.34
RNF135-204ENST00000443677 STAG3Q9UJ98 1225 aa29.69■■■□□ 2.34
RNF135-204ENST00000443677 EID1Q9Y6B2 187 aa29.67■■■□□ 2.34
RNF135-204ENST00000443677 HFM1A2PYH4 1435 aa29.66■■■□□ 2.34
RNF135-204ENST00000443677 LTKP29376 864 aa29.66■■■□□ 2.34
RNF135-204ENST00000443677 SCAF11Q99590 1463 aaKnown RBP29.66■■■□□ 2.34
RNF135-204ENST00000443677 PIK3C2BO00750 1634 aa29.65■■■□□ 2.34
RNF135-204ENST00000443677 IDI1Q13907 227 aa29.65■■■□□ 2.34
RNF135-204ENST00000443677 ARHGAP23Q9P227 1491 aa29.65■■■□□ 2.34
RNF135-204ENST00000443677 SLIT1O75093 1534 aa29.65■■■□□ 2.34
RNF135-204ENST00000443677 UNC13BO14795 1591 aa29.64■■■□□ 2.33
RNF135-204ENST00000443677 EFCAB6Q5THR3 1501 aa29.63■■■□□ 2.33
RNF135-204ENST00000443677 TOM1O60784 492 aa29.63■■■□□ 2.33
RNF135-204ENST00000443677 NUP155O75694 1391 aa29.62■■■□□ 2.33
RNF135-204ENST00000443677 TMEM2Q9UHN6 1383 aa29.61■■■□□ 2.33
RNF135-204ENST00000443677 NOS1P29475 1434 aa29.6■■■□□ 2.33
RNF135-204ENST00000443677 GCC2Q8IWJ2 1684 aa29.6■■■□□ 2.33
RNF135-204ENST00000443677 SLC52A1Q9NWF4 448 aa29.59■■■□□ 2.33
RNF135-204ENST00000443677 KDM5AP29375 1690 aaKnown RBP29.59■■■□□ 2.33
RNF135-204ENST00000443677 SYNMO15061 1565 aa29.57■■■□□ 2.32
RNF135-204ENST00000443677 RPRD2Q5VT52 1461 aaKnown RBP29.56■■■□□ 2.32
RNF135-204ENST00000443677 DISP3Q9P2K9 1392 aa29.56■■■□□ 2.32
RNF135-204ENST00000443677 SCAF1Q9H7N4 1312 aaKnown RBP29.56■■■□□ 2.32
RNF135-204ENST00000443677 PIP4K2BP78356 416 aa29.55■■■□□ 2.32
RNF135-204ENST00000443677 STRCP1A6NGW2 1772 aa29.53■■■□□ 2.32
RNF135-204ENST00000443677 IQGAP3Q86VI3 1631 aa29.53■■■□□ 2.32
RNF135-204ENST00000443677 TET3O43151 1660 aa29.52■■■□□ 2.32
RNF135-204ENST00000443677 LRRC7Q96NW7 1537 aa29.5■■■□□ 2.31
RNF135-204ENST00000443677 TRIM52Q96A61 297 aa29.5■■■□□ 2.31
RNF135-204ENST00000443677 ADGRB3O60242 1522 aa29.47■■■□□ 2.31
RNF135-204ENST00000443677 SETD5Q9C0A6 1442 aa29.45■■■□□ 2.3
RNF135-204ENST00000443677 HSPA1LP34931 641 aa29.44■■■□□ 2.3
RNF135-204ENST00000443677 HDGFP51858 240 aaKnown RBP29.42■■■□□ 2.3
RNF135-204ENST00000443677 BCANQ96GW7 911 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms