RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 CGNL1Q0VF96 1302 aa6.31□□□□□ -1.4
HERC1-201ENST00000443617 FTSJ3Q8IY81 847 aaKnown RBP6.31□□□□□ -1.4
HERC1-201ENST00000443617 DHX29Q7Z478 1369 aaKnown RBP6.31□□□□□ -1.4
HERC1-201ENST00000443617 AAMPQ13685 434 aa6.31□□□□□ -1.4
HERC1-201ENST00000443617 NCAPD3P42695 1498 aa6.31□□□□□ -1.4
HERC1-201ENST00000443617 E9PSI1 815 aa6.31□□□□□ -1.4
HERC1-201ENST00000443617 ERICH3Q5RHP9 1530 aa6.31□□□□□ -1.4
HERC1-201ENST00000443617 TBC1D32Q96NH3 1257 aa6.3□□□□□ -1.4
HERC1-201ENST00000443617 CENPJQ9HC77 1338 aaPredicted RBP6.3□□□□□ -1.4
HERC1-201ENST00000443617 FHOD3Q2V2M9 1422 aa6.3□□□□□ -1.4
HERC1-201ENST00000443617 CLUAP1Q96AJ1 413 aa6.29□□□□□ -1.4
HERC1-201ENST00000443617 COG6Q9Y2V7 657 aa6.29□□□□□ -1.4
HERC1-201ENST00000443617 NAIPQ13075 1403 aa6.29□□□□□ -1.4
HERC1-201ENST00000443617 PDE3AQ14432 1141 aa6.29□□□□□ -1.4
HERC1-201ENST00000443617 RGL3Q3MIN7 710 aa6.29□□□□□ -1.4
HERC1-201ENST00000443617 CIZ1Q9ULV3 898 aaPredicted RBP6.29□□□□□ -1.4
HERC1-201ENST00000443617 KIAA2012Q0VF49 1180 aa6.29□□□□□ -1.4
HERC1-201ENST00000443617 DNTTIP2Q5QJE6 756 aaKnown RBP6.29□□□□□ -1.4
HERC1-201ENST00000443617 CCDC146Q8IYE0 955 aa6.29□□□□□ -1.4
HERC1-201ENST00000443617 PDE4CQ08493 712 aa6.28□□□□□ -1.4
HERC1-201ENST00000443617 TERF1P54274 439 aa6.28□□□□□ -1.4
HERC1-201ENST00000443617 ANTXR1Q9H6X2 564 aa6.28□□□□□ -1.4
HERC1-201ENST00000443617 NCOA2Q15596 1464 aa6.28□□□□□ -1.4
HERC1-201ENST00000443617 CDCA8Q53HL2 280 aa6.28□□□□□ -1.4
HERC1-201ENST00000443617 HS1BP3Q53T59 392 aa6.28□□□□□ -1.4
HERC1-201ENST00000443617 UQCRHLA0A096LP55 91 aa6.28□□□□□ -1.4
HERC1-201ENST00000443617 IGHDP01880 384 aa6.28□□□□□ -1.4
HERC1-201ENST00000443617 UQCRHP07919 91 aa6.28□□□□□ -1.4
HERC1-201ENST00000443617 ZHX1Q9UKY1 873 aaPredicted RBP6.28□□□□□ -1.4
HERC1-201ENST00000443617 CFDP1Q9UEE9 299 aaPredicted RBP6.28□□□□□ -1.4
HERC1-201ENST00000443617 CASKIN1Q8WXD9 1431 aa6.28□□□□□ -1.4
HERC1-201ENST00000443617 CCDC39Q9UFE4 941 aa6.28□□□□□ -1.4
HERC1-201ENST00000443617 DYNC1I1O14576 645 aa6.28□□□□□ -1.4
HERC1-201ENST00000443617 SYNJ1O43426 1573 aa6.28□□□□□ -1.4
HERC1-201ENST00000443617 MIA2Q96PC5 1412 aa6.28□□□□□ -1.4
HERC1-201ENST00000443617 FOXD4L1Q9NU39 408 aa6.28□□□□□ -1.4
HERC1-201ENST00000443617 TMF1P82094 1093 aa6.27□□□□□ -1.41
HERC1-201ENST00000443617 AQRO60306 1485 aaKnown RBP eCLIP6.27□□□□□ -1.419e-7■■■■□ 24.4
HERC1-201ENST00000443617 SEC24BO95487 1268 aa6.27□□□□□ -1.41
HERC1-201ENST00000443617 PTPRKQ15262 1439 aa6.27□□□□□ -1.41
HERC1-201ENST00000443617 MCM5P33992 734 aa6.27□□□□□ -1.41
HERC1-201ENST00000443617 APAF1O14727 1248 aa6.27□□□□□ -1.41
HERC1-201ENST00000443617 NGEFQ8N5V2 710 aa6.27□□□□□ -1.41
HERC1-201ENST00000443617 LRPPRCP42704 1394 aaKnown RBP6.27□□□□□ -1.41
HERC1-201ENST00000443617 SLFN5Q08AF3 891 aa6.27□□□□□ -1.41
HERC1-201ENST00000443617 SMAP1Q8IYB5 467 aaPredicted RBP6.27□□□□□ -1.41
HERC1-201ENST00000443617 DDX49Q9Y6V7 483 aaKnown RBP6.26□□□□□ -1.41
HERC1-201ENST00000443617 PDZRN3Q9UPQ7 1066 aa6.26□□□□□ -1.41
HERC1-201ENST00000443617 PRDM10Q9NQV6 1147 aa6.26□□□□□ -1.41
HERC1-201ENST00000443617 DUSP27Q5VZP5 1158 aa6.26□□□□□ -1.41
HERC1-201ENST00000443617 BCAR3O75815 825 aa6.26□□□□□ -1.41
HERC1-201ENST00000443617 EIF4G1Q04637 1599 aaKnown RBP6.25□□□□□ -1.41
HERC1-201ENST00000443617 FGD1P98174 961 aa6.25□□□□□ -1.41
HERC1-201ENST00000443617 TAF3Q5VWG9 929 aa6.25□□□□□ -1.41
HERC1-201ENST00000443617 TNPO1Q92973 898 aaKnown RBP6.25□□□□□ -1.41
HERC1-201ENST00000443617 CHAF1AQ13111 956 aaPredicted RBP6.25□□□□□ -1.41
HERC1-201ENST00000443617 MYOM3Q5VTT5 1437 aa6.25□□□□□ -1.41
HERC1-201ENST00000443617 SMARCA4P51532 1647 aa6.25□□□□□ -1.41
HERC1-201ENST00000443617 CCDC94Q9BW85 323 aaPredicted RBP6.25□□□□□ -1.41
HERC1-201ENST00000443617 SASS6Q6UVJ0 657 aa6.24□□□□□ -1.41
HERC1-201ENST00000443617 EIF3AQ14152 1382 aaKnown RBP6.24□□□□□ -1.41
HERC1-201ENST00000443617 NEUROD2Q15784 382 aa6.24□□□□□ -1.41
HERC1-201ENST00000443617 SPATA31E1Q6ZUB1 1445 aa6.24□□□□□ -1.41
HERC1-201ENST00000443617 RIPK4P57078 832 aa6.24□□□□□ -1.41
HERC1-201ENST00000443617 NUP155O75694 1391 aa6.24□□□□□ -1.41
HERC1-201ENST00000443617 CDK11BP21127 795 aaKnown RBP6.24□□□□□ -1.41
HERC1-201ENST00000443617 PPP2R1AP30153 589 aa6.24□□□□□ -1.41
HERC1-201ENST00000443617 XPCQ01831 940 aaPredicted RBP6.24□□□□□ -1.41
HERC1-201ENST00000443617 BBXQ8WY36 941 aaPredicted RBP6.23□□□□□ -1.41
HERC1-201ENST00000443617 GTPBP4Q9BZE4 634 aaKnown RBP6.23□□□□□ -1.41
HERC1-201ENST00000443617 ITPRIPQ8IWB1 547 aa6.23□□□□□ -1.41
HERC1-201ENST00000443617 IPO8O15397 1037 aaKnown RBP6.23□□□□□ -1.41
HERC1-201ENST00000443617 ERBB4Q15303 1308 aa6.23□□□□□ -1.41
HERC1-201ENST00000443617 TSPY4P0CV99 314 aa6.23□□□□□ -1.41
HERC1-201ENST00000443617 TSPY10P0CW01 314 aa6.23□□□□□ -1.41
HERC1-201ENST00000443617 HMGN5P82970 282 aaKnown RBP6.23□□□□□ -1.41
HERC1-201ENST00000443617 ZBTB7CA1YPR0 619 aa6.23□□□□□ -1.41
HERC1-201ENST00000443617 NOL7Q9UMY1 257 aaKnown RBP6.23□□□□□ -1.41
HERC1-201ENST00000443617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.22□□□□□ -1.412e-7■■■■□ 23.4
HERC1-201ENST00000443617 CASC1Q6TDU7 716 aa6.22□□□□□ -1.41
HERC1-201ENST00000443617 PHF14O94880 888 aa6.22□□□□□ -1.41
HERC1-201ENST00000443617 SYAP1Q96A49 352 aaPredicted RBP6.22□□□□□ -1.41
HERC1-201ENST00000443617 ZNF771Q7L3S4 317 aaPredicted RBP6.22□□□□□ -1.41
HERC1-201ENST00000443617 ATAD2BQ9ULI0 1458 aa6.21□□□□□ -1.41
HERC1-201ENST00000443617 PCDHB15Q9Y5E8 787 aa6.21□□□□□ -1.41
HERC1-201ENST00000443617 ZKSCAN2Q63HK3 967 aa6.21□□□□□ -1.41
HERC1-201ENST00000443617 CAVIN1Q6NZI2 390 aaKnown RBP6.21□□□□□ -1.41
HERC1-201ENST00000443617 SMC5Q8IY18 1101 aa6.21□□□□□ -1.42
HERC1-201ENST00000443617 INSRP06213 1382 aa6.21□□□□□ -1.42
HERC1-201ENST00000443617 GAS2L3Q86XJ1 694 aa6.21□□□□□ -1.42
HERC1-201ENST00000443617 SNX21Q969T3 373 aa6.21□□□□□ -1.42
HERC1-201ENST00000443617 NUCB2P80303 420 aa6.21□□□□□ -1.42
HERC1-201ENST00000443617 MCTP1Q6DN14 999 aa6.21□□□□□ -1.42
HERC1-201ENST00000443617 ZNF644Q9H582 1327 aaPredicted RBP6.21□□□□□ -1.42
HERC1-201ENST00000443617 PPP4R3BQ5MIZ7 849 aa6.21□□□□□ -1.42
HERC1-201ENST00000443617 RRP7AQ9Y3A4 280 aaKnown RBP6.21□□□□□ -1.42
HERC1-201ENST00000443617 TIAM1Q13009 1591 aa6.21□□□□□ -1.42
HERC1-201ENST00000443617 USP19O94966 1318 aa6.2□□□□□ -1.42
HERC1-201ENST00000443617 MORC1Q86VD1 984 aa6.2□□□□□ -1.42
HERC1-201ENST00000443617 DZIP1LQ8IYY4 767 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms