RNA–Protein interactions for RNA: ENST00000443598.6

HNF4A-205, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-205ENST00000443598 DUOX2Q9NRD8 1548 aa32.92■■■□□ 2.86
HNF4A-205ENST00000443598 RNF17Q9BXT8 1623 aaKnown RBP32.91■■■□□ 2.86
HNF4A-205ENST00000443598 KDM5DQ9BY66 1539 aa32.9■■■□□ 2.86
HNF4A-205ENST00000443598 PTPRKQ15262 1439 aa32.88■■■□□ 2.85
HNF4A-205ENST00000443598 KIF15Q9NS87 1388 aa32.86■■■□□ 2.85
HNF4A-205ENST00000443598 WASHC2CQ9Y4E1 1318 aa32.84■■■□□ 2.85
HNF4A-205ENST00000443598 ERBINQ96RT1 1412 aa32.82■■■□□ 2.84
HNF4A-205ENST00000443598 ANKRD30AQ9BXX3 1397 aa32.81■■■□□ 2.84
HNF4A-205ENST00000443598 FAM50AQ14320 339 aaKnown RBP32.8■■■□□ 2.84
HNF4A-205ENST00000443598 ZC3H13Q5T200 1668 aaKnown RBP32.79■■■□□ 2.84
HNF4A-205ENST00000443598 RRP7BPQ9NSQ0 103 aa32.79■■■□□ 2.84
HNF4A-205ENST00000443598 PZPP20742 1482 aa32.78■■■□□ 2.84
HNF4A-205ENST00000443598 MROH1Q8NDA8 1641 aa32.77■■■□□ 2.84
HNF4A-205ENST00000443598 ADGRL2O95490 1459 aa32.77■■■□□ 2.84
HNF4A-205ENST00000443598 NCOA1Q15788 1441 aa32.76■■■□□ 2.84
HNF4A-205ENST00000443598 MYO3AQ8NEV4 1616 aa32.76■■■□□ 2.83
HNF4A-205ENST00000443598 ZNF142P52746 1687 aaPredicted RBP32.75■■■□□ 2.83
HNF4A-205ENST00000443598 STRCQ7RTU9 1775 aa32.75■■■□□ 2.83
HNF4A-205ENST00000443598 CHIC2Q9UKJ5 165 aa32.74■■■□□ 2.83
HNF4A-205ENST00000443598 ABCC3O15438 1527 aa32.74■■■□□ 2.83
HNF4A-205ENST00000443598 PRDM15P57071 1507 aaPredicted RBP32.7■■■□□ 2.83
HNF4A-205ENST00000443598 DMRT2Q9Y5R5 561 aa32.69■■■□□ 2.82
HNF4A-205ENST00000443598 CEP170BQ9Y4F5 1589 aaPredicted RBP32.69■■■□□ 2.82
HNF4A-205ENST00000443598 DEPDC5O75140 1603 aa32.69■■■□□ 2.82
HNF4A-205ENST00000443598 TNRQ92752 1358 aa32.67■■■□□ 2.82
HNF4A-205ENST00000443598 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.67■■■□□ 2.822e-7■□□□□ 10.3
HNF4A-205ENST00000443598 CEP152O94986 1710 aa32.66■■■□□ 2.82
HNF4A-205ENST00000443598 FBXO31Q5XUX0 539 aaPredicted RBP32.66■■■□□ 2.82
HNF4A-205ENST00000443598 PPARGC1BQ86YN6 1023 aaKnown RBP32.66■■■□□ 2.82
HNF4A-205ENST00000443598 A2ML1A8K2U0 1454 aa32.64■■■□□ 2.82
HNF4A-205ENST00000443598 CAMSAP1Q5T5Y3 1602 aa32.64■■■□□ 2.82
HNF4A-205ENST00000443598 PLA2R1Q13018 1463 aa32.6■■■□□ 2.81
HNF4A-205ENST00000443598 PTPRTO14522 1441 aa32.6■■■□□ 2.81
HNF4A-205ENST00000443598 KANK1Q14678 1352 aa32.59■■■□□ 2.81
HNF4A-205ENST00000443598 SPATA31D1Q6ZQQ2 1576 aa32.58■■■□□ 2.81
HNF4A-205ENST00000443598 NLRP1Q9C000 1473 aa32.58■■■□□ 2.81
HNF4A-205ENST00000443598 ROCK1Q13464 1354 aa32.58■■■□□ 2.81
HNF4A-205ENST00000443598 ARHGAP31Q2M1Z3 1444 aa32.57■■■□□ 2.81
HNF4A-205ENST00000443598 ANKRD50Q9ULJ7 1429 aa32.57■■■□□ 2.8
HNF4A-205ENST00000443598 VWDEQ8N2E2 1590 aa32.55■■■□□ 2.8
HNF4A-205ENST00000443598 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.55■■■□□ 2.82e-8■□□□□ 9.9
HNF4A-205ENST00000443598 ERVK-7P63135 1459 aa32.54■■■□□ 2.8
HNF4A-205ENST00000443598 CFAP65Q6ZU64 1925 aaKnown RBP32.53■■■□□ 2.8
HNF4A-205ENST00000443598 LMTK2Q8IWU2 1503 aa32.53■■■□□ 2.8
HNF4A-205ENST00000443598 PKD2Q13563 968 aa32.51■■■□□ 2.8
HNF4A-205ENST00000443598 RRBP1Q9P2E9 1410 aaKnown RBP32.51■■■□□ 2.79
HNF4A-205ENST00000443598 ILDR1Q86SU0 546 aaPredicted RBP32.46■■■□□ 2.79
HNF4A-205ENST00000443598 UGGT1Q9NYU2 1555 aa32.46■■■□□ 2.79
HNF4A-205ENST00000443598 NCKAP5LQ9HCH0 1330 aa32.45■■■□□ 2.79
HNF4A-205ENST00000443598 THEMISQ8N1K5 641 aaPredicted RBP32.44■■■□□ 2.78
HNF4A-205ENST00000443598 ITGAEP38570 1179 aa32.41■■■□□ 2.78
HNF4A-205ENST00000443598 UNC13BO14795 1591 aa32.41■■■□□ 2.78
HNF4A-205ENST00000443598 EFCAB6Q5THR3 1501 aa32.4■■■□□ 2.78
HNF4A-205ENST00000443598 POLR1AO95602 1720 aaPredicted RBP32.4■■■□□ 2.78
HNF4A-205ENST00000443598 CERKQ8TCT0 537 aa32.37■■■□□ 2.77
HNF4A-205ENST00000443598 FBXO41Q8TF61 875 aa32.37■■■□□ 2.77
HNF4A-205ENST00000443598 TET3O43151 1660 aa32.34■■■□□ 2.77
HNF4A-205ENST00000443598 RPRD2Q5VT52 1461 aaKnown RBP32.34■■■□□ 2.77
HNF4A-205ENST00000443598 UBR1Q8IWV7 1749 aa32.34■■■□□ 2.77
HNF4A-205ENST00000443598 ANKLE2Q86XL3 938 aa32.33■■■□□ 2.77
HNF4A-205ENST00000443598 NEURL4Q96JN8 1562 aa32.31■■■□□ 2.76
HNF4A-205ENST00000443598 GCC2Q8IWJ2 1684 aa32.31■■■□□ 2.76
HNF4A-205ENST00000443598 NOS1P29475 1434 aa32.3■■■□□ 2.76
HNF4A-205ENST00000443598 LTBP4Q8N2S1 1624 aa32.3■■■□□ 2.76
HNF4A-205ENST00000443598 IQGAP3Q86VI3 1631 aa32.28■■■□□ 2.76
HNF4A-205ENST00000443598 MED14O60244 1454 aa32.27■■■□□ 2.76
HNF4A-205ENST00000443598 KDM5AP29375 1690 aaKnown RBP32.27■■■□□ 2.76
HNF4A-205ENST00000443598 SYNMO15061 1565 aa32.26■■■□□ 2.75
HNF4A-205ENST00000443598 PIK3C2BO00750 1634 aa32.25■■■□□ 2.75
HNF4A-205ENST00000443598 SLC52A1Q9NWF4 448 aa32.22■■■□□ 2.75
HNF4A-205ENST00000443598 NUP155O75694 1391 aa32.22■■■□□ 2.75
HNF4A-205ENST00000443598 SLIT1O75093 1534 aa32.22■■■□□ 2.75
HNF4A-205ENST00000443598 ARHGAP23Q9P227 1491 aa32.21■■■□□ 2.75
HNF4A-205ENST00000443598 IDI1Q13907 227 aa32.21■■■□□ 2.75
HNF4A-205ENST00000443598 NPHP4O75161 1426 aaPredicted RBP32.2■■■□□ 2.75
HNF4A-205ENST00000443598 NAIPQ13075 1403 aa32.19■■■□□ 2.74
HNF4A-205ENST00000443598 ZNF335Q9H4Z2 1342 aaPredicted RBP32.19■■■□□ 2.74
HNF4A-205ENST00000443598 E9PCH4 1651 aa32.19■■■□□ 2.74
HNF4A-205ENST00000443598 IQSEC2Q5JU85 1478 aa32.18■■■□□ 2.74
HNF4A-205ENST00000443598 IQGAP1P46940 1657 aa32.18■■■□□ 2.74
HNF4A-205ENST00000443598 STAG3Q9UJ98 1225 aa32.16■■■□□ 2.74
HNF4A-205ENST00000443598 SCAF11Q99590 1463 aaKnown RBP32.15■■■□□ 2.74
HNF4A-205ENST00000443598 HFM1A2PYH4 1435 aa32.14■■■□□ 2.74
HNF4A-205ENST00000443598 ADGRB3O60242 1522 aa32.13■■■□□ 2.73
HNF4A-205ENST00000443598 TMEM2Q9UHN6 1383 aa32.13■■■□□ 2.73
HNF4A-205ENST00000443598 EID1Q9Y6B2 187 aa32.11■■■□□ 2.73
HNF4A-205ENST00000443598 TXNDC2Q86VQ3 553 aa32.1■■■□□ 2.73
HNF4A-205ENST00000443598 LTKP29376 864 aa32.09■■■□□ 2.73
HNF4A-205ENST00000443598 CPS1P31327 1500 aa32.05■■■□□ 2.72
HNF4A-205ENST00000443598 TMEM131LA2VDJ0 1609 aa32.01■■■□□ 2.72
HNF4A-205ENST00000443598 MYO5BQ9ULV0 1848 aa32.01■■■□□ 2.72
HNF4A-205ENST00000443598 SPHKAPQ2M3C7 1700 aa31.98■■■□□ 2.71
HNF4A-205ENST00000443598 ZFYVE9O95405 1425 aa31.94■■■□□ 2.7
HNF4A-205ENST00000443598 HDGFP51858 240 aaKnown RBP31.93■■■□□ 2.7
HNF4A-205ENST00000443598 STRCP1A6NGW2 1772 aa31.92■■■□□ 2.7
HNF4A-205ENST00000443598 TRIM52Q96A61 297 aa31.9■■■□□ 2.7
HNF4A-205ENST00000443598 RIMS2Q9UQ26 1411 aa31.89■■■□□ 2.7
HNF4A-205ENST00000443598 CHGAP10645 457 aaKnown RBP31.88■■■□□ 2.69
HNF4A-205ENST00000443598 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.86■■■□□ 2.69
HNF4A-205ENST00000443598 TRPM2O94759 1503 aa31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms