RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 KIF3BO15066 747 aa33.47■■■□□ 2.95
POLR2J3-202ENST00000443430 TNRQ92752 1358 aa33.47■■■□□ 2.95
POLR2J3-202ENST00000443430 POLR1AO95602 1720 aaPredicted RBP33.45■■■□□ 2.94
POLR2J3-202ENST00000443430 NEURL4Q96JN8 1562 aa33.44■■■□□ 2.94
POLR2J3-202ENST00000443430 PZPP20742 1482 aa33.44■■■□□ 2.94
POLR2J3-202ENST00000443430 CCDC141Q6ZP82 1450 aa33.41■■■□□ 2.94
POLR2J3-202ENST00000443430 KDM5DQ9BY66 1539 aa33.41■■■□□ 2.94
POLR2J3-202ENST00000443430 CPS1P31327 1500 aa33.39■■■□□ 2.94
POLR2J3-202ENST00000443430 FAM135AQ9P2D6 1515 aa33.39■■■□□ 2.94
POLR2J3-202ENST00000443430 SHANK2Q9UPX8 1470 aa33.38■■■□□ 2.93
POLR2J3-202ENST00000443430 WASHC2CQ9Y4E1 1318 aa33.38■■■□□ 2.93
POLR2J3-202ENST00000443430 HSPA1LP34931 641 aa33.37■■■□□ 2.93
POLR2J3-202ENST00000443430 RSPH4AQ5TD94 716 aa33.37■■■□□ 2.93
POLR2J3-202ENST00000443430 CAMSAP2Q08AD1 1489 aa33.37■■■□□ 2.93
POLR2J3-202ENST00000443430 SCAF1Q9H7N4 1312 aaKnown RBP33.35■■■□□ 2.93
POLR2J3-202ENST00000443430 TOM1O60784 492 aa33.35■■■□□ 2.93
POLR2J3-202ENST00000443430 PIP4K2BP78356 416 aa33.35■■■□□ 2.93
POLR2J3-202ENST00000443430 NCOA2Q15596 1464 aa33.35■■■□□ 2.93
POLR2J3-202ENST00000443430 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.34■■■□□ 2.93
POLR2J3-202ENST00000443430 ANKLE2Q86XL3 938 aa33.34■■■□□ 2.93
POLR2J3-202ENST00000443430 MIA2Q96PC5 1412 aa33.33■■■□□ 2.93
POLR2J3-202ENST00000443430 THEMISQ8N1K5 641 aaPredicted RBP33.32■■■□□ 2.92
POLR2J3-202ENST00000443430 NLRP1Q9C000 1473 aa33.3■■■□□ 2.92
POLR2J3-202ENST00000443430 VWDEQ8N2E2 1590 aa33.29■■■□□ 2.92
POLR2J3-202ENST00000443430 UGGT1Q9NYU2 1555 aa33.27■■■□□ 2.92
POLR2J3-202ENST00000443430 ARHGEF5Q12774 1597 aa33.26■■■□□ 2.91
POLR2J3-202ENST00000443430 MED1Q15648 1581 aaPredicted RBP33.26■■■□□ 2.91
POLR2J3-202ENST00000443430 MED14O60244 1454 aa33.25■■■□□ 2.91
POLR2J3-202ENST00000443430 NPHP4O75161 1426 aaPredicted RBP33.25■■■□□ 2.91
POLR2J3-202ENST00000443430 DEPDC5O75140 1603 aa33.24■■■□□ 2.91
POLR2J3-202ENST00000443430 TSPY4P0CV99 314 aa33.24■■■□□ 2.91
POLR2J3-202ENST00000443430 TSPY10P0CW01 314 aa33.24■■■□□ 2.91
POLR2J3-202ENST00000443430 ALKQ9UM73 1620 aa33.19■■■□□ 2.9
POLR2J3-202ENST00000443430 RNF17Q9BXT8 1623 aaKnown RBP33.17■■■□□ 2.9
POLR2J3-202ENST00000443430 IQGAP1P46940 1657 aa33.16■■■□□ 2.9
POLR2J3-202ENST00000443430 ABCC3O15438 1527 aa33.15■■■□□ 2.9
POLR2J3-202ENST00000443430 STRCP1A6NGW2 1772 aa33.12■■■□□ 2.89
POLR2J3-202ENST00000443430 ZC3H13Q5T200 1668 aaKnown RBP33.11■■■□□ 2.89
POLR2J3-202ENST00000443430 MAST1Q9Y2H9 1570 aa33.11■■■□□ 2.89
POLR2J3-202ENST00000443430 ERVK-7P63135 1459 aa33.08■■■□□ 2.89
POLR2J3-202ENST00000443430 LRRC7Q96NW7 1537 aa33.07■■■□□ 2.89
POLR2J3-202ENST00000443430 CFAP65Q6ZU64 1925 aaKnown RBP33.06■■■□□ 2.88
POLR2J3-202ENST00000443430 LRRC9Q6ZRR7 1453 aa33.06■■■□□ 2.88
POLR2J3-202ENST00000443430 EIF2AK4Q9P2K8 1649 aaKnown RBP33.06■■■□□ 2.88
POLR2J3-202ENST00000443430 MROH1Q8NDA8 1641 aa33.05■■■□□ 2.88
POLR2J3-202ENST00000443430 PHF23Q9BUL5 403 aaPredicted RBP33.01■■■□□ 2.87
POLR2J3-202ENST00000443430 CEP152O94986 1710 aa33■■■□□ 2.87
POLR2J3-202ENST00000443430 UBR1Q8IWV7 1749 aa33■■■□□ 2.87
POLR2J3-202ENST00000443430 SYNMO15061 1565 aa33■■■□□ 2.87
POLR2J3-202ENST00000443430 VPS8Q8N3P4 1428 aa32.97■■■□□ 2.87
POLR2J3-202ENST00000443430 SENP3Q9H4L4 574 aaPredicted RBP32.97■■■□□ 2.87
POLR2J3-202ENST00000443430 KANK4Q5T7N3 995 aaPredicted RBP32.96■■■□□ 2.87
POLR2J3-202ENST00000443430 SCAF11Q99590 1463 aaKnown RBP32.95■■■□□ 2.87
POLR2J3-202ENST00000443430 LTKP29376 864 aa32.93■■■□□ 2.86
POLR2J3-202ENST00000443430 DUOX2Q9NRD8 1548 aa32.92■■■□□ 2.86
POLR2J3-202ENST00000443430 MYOM3Q5VTT5 1437 aa32.92■■■□□ 2.86
POLR2J3-202ENST00000443430 ARHGAP23Q9P227 1491 aa32.92■■■□□ 2.86
POLR2J3-202ENST00000443430 TXNDC2Q86VQ3 553 aa32.9■■■□□ 2.86
POLR2J3-202ENST00000443430 SLIT1O75093 1534 aa32.9■■■□□ 2.86
POLR2J3-202ENST00000443430 ARHGAP31Q2M1Z3 1444 aa32.88■■■□□ 2.85
POLR2J3-202ENST00000443430 MAP3K1Q13233 1512 aa32.87■■■□□ 2.85
POLR2J3-202ENST00000443430 XIRP1Q702N8 1843 aaKnown RBP32.84■■■□□ 2.85
POLR2J3-202ENST00000443430 PRDM15P57071 1507 aaPredicted RBP32.84■■■□□ 2.85
POLR2J3-202ENST00000443430 KIF15Q9NS87 1388 aa32.83■■■□□ 2.85
POLR2J3-202ENST00000443430 EID1Q9Y6B2 187 aa32.81■■■□□ 2.84
POLR2J3-202ENST00000443430 ERBINQ96RT1 1412 aa32.79■■■□□ 2.84
POLR2J3-202ENST00000443430 LOC105371045A0A1W2PR82 267 aa32.79■■■□□ 2.84
POLR2J3-202ENST00000443430 RRP7BPQ9NSQ0 103 aa32.79■■■□□ 2.84
POLR2J3-202ENST00000443430 ABCC5O15440 1437 aa32.78■■■□□ 2.84
POLR2J3-202ENST00000443430 PIK3C2BO00750 1634 aa32.78■■■□□ 2.84
POLR2J3-202ENST00000443430 RGS17Q9UGC6 210 aaPredicted RBP32.77■■■□□ 2.84
POLR2J3-202ENST00000443430 TMEM2Q9UHN6 1383 aa32.76■■■□□ 2.83
POLR2J3-202ENST00000443430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.76■■■□□ 2.83
POLR2J3-202ENST00000443430 CROCC2H7BZ55 1655 aa32.75■■■□□ 2.83
POLR2J3-202ENST00000443430 FAM135BQ49AJ0 1406 aa32.71■■■□□ 2.83
POLR2J3-202ENST00000443430 STAG3Q9UJ98 1225 aa32.71■■■□□ 2.83
POLR2J3-202ENST00000443430 PTPN23Q9H3S7 1636 aa32.69■■■□□ 2.82
POLR2J3-202ENST00000443430 KANK1Q14678 1352 aa32.69■■■□□ 2.82
POLR2J3-202ENST00000443430 IDI1Q13907 227 aa32.68■■■□□ 2.82
POLR2J3-202ENST00000443430 KDM5AP29375 1690 aaKnown RBP32.67■■■□□ 2.82
POLR2J3-202ENST00000443430 TMEM94Q12767 1356 aa32.67■■■□□ 2.82
POLR2J3-202ENST00000443430 DAPK1P53355 1430 aa32.67■■■□□ 2.82
POLR2J3-202ENST00000443430 EFCAB6Q5THR3 1501 aa32.67■■■□□ 2.82
POLR2J3-202ENST00000443430 KCNA6P17658 529 aa32.65■■■□□ 2.82
POLR2J3-202ENST00000443430 LMTK2Q8IWU2 1503 aa32.64■■■□□ 2.82
POLR2J3-202ENST00000443430 TET3O43151 1660 aa32.62■■■□□ 2.81
POLR2J3-202ENST00000443430 SLC26A8Q96RN1 970 aa32.61■■■□□ 2.81
POLR2J3-202ENST00000443430 PROSER2Q86WR7 435 aaPredicted RBP32.59■■■□□ 2.81
POLR2J3-202ENST00000443430 RBM33Q96EV2 1170 aaKnown RBP32.58■■■□□ 2.81
POLR2J3-202ENST00000443430 CHIC2Q9UKJ5 165 aa32.58■■■□□ 2.81
POLR2J3-202ENST00000443430 ANKRD30AQ9BXX3 1397 aa32.58■■■□□ 2.81
POLR2J3-202ENST00000443430 NOS1P29475 1434 aa32.57■■■□□ 2.8
POLR2J3-202ENST00000443430 ROBO1Q9Y6N7 1651 aa32.56■■■□□ 2.8
POLR2J3-202ENST00000443430 FGD6Q6ZV73 1430 aa32.56■■■□□ 2.8
POLR2J3-202ENST00000443430 POTEAQ6S8J7 498 aa32.55■■■□□ 2.8
POLR2J3-202ENST00000443430 ADGRB3O60242 1522 aa32.52■■■□□ 2.8
POLR2J3-202ENST00000443430 APLP2Q06481 763 aa32.52■■■□□ 2.8
POLR2J3-202ENST00000443430 NWD1Q149M9 1564 aa32.51■■■□□ 2.79
POLR2J3-202ENST00000443430 NKTRP30414 1462 aaKnown RBP32.5■■■□□ 2.79
POLR2J3-202ENST00000443430 SLC52A1Q9NWF4 448 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms