RNA–Protein interactions for RNA: ENST00000443353.5

PDK1-208, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

TSL 2

Gene PDK1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-208ENST00000443353 ARHGEF5Q12774 1597 aa16.51■□□□□ 0.23
PDK1-208ENST00000443353 A2ML1A8K2U0 1454 aa16.49■□□□□ 0.23
PDK1-208ENST00000443353 PKD2Q13563 968 aa16.49■□□□□ 0.23
PDK1-208ENST00000443353 KDM5DQ9BY66 1539 aa16.49■□□□□ 0.23
PDK1-208ENST00000443353 WASHC2CQ9Y4E1 1318 aa16.48■□□□□ 0.23
PDK1-208ENST00000443353 TSPY4P0CV99 314 aa16.48■□□□□ 0.23
PDK1-208ENST00000443353 TSPY10P0CW01 314 aa16.48■□□□□ 0.23
PDK1-208ENST00000443353 TNRQ92752 1358 aa16.48■□□□□ 0.23
PDK1-208ENST00000443353 DNMT1P26358 1616 aaKnown RBP16.48■□□□□ 0.23
PDK1-208ENST00000443353 PZPP20742 1482 aa16.48■□□□□ 0.23
PDK1-208ENST00000443353 MAP3K1Q13233 1512 aa16.45■□□□□ 0.22
PDK1-208ENST00000443353 IQSEC2Q5JU85 1478 aa16.45■□□□□ 0.22
PDK1-208ENST00000443353 MYOM3Q5VTT5 1437 aa16.45■□□□□ 0.22
PDK1-208ENST00000443353 MIA2Q96PC5 1412 aa16.44■□□□□ 0.22
PDK1-208ENST00000443353 MAST1Q9Y2H9 1570 aa16.43■□□□□ 0.22
PDK1-208ENST00000443353 NEURL4Q96JN8 1562 aa16.43■□□□□ 0.22
PDK1-208ENST00000443353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.42■□□□□ 0.22
PDK1-208ENST00000443353 FAM135AQ9P2D6 1515 aa16.42■□□□□ 0.22
PDK1-208ENST00000443353 ILDR2Q71H61 639 aa16.42■□□□□ 0.22
PDK1-208ENST00000443353 ABCC3O15438 1527 aa16.41■□□□□ 0.22
PDK1-208ENST00000443353 MROH1Q8NDA8 1641 aa16.4■□□□□ 0.22
PDK1-208ENST00000443353 RNF17Q9BXT8 1623 aaKnown RBP16.4■□□□□ 0.22
PDK1-208ENST00000443353 DISP3Q9P2K9 1392 aa16.38■□□□□ 0.21
PDK1-208ENST00000443353 ABCC5O15440 1437 aa16.38■□□□□ 0.21
PDK1-208ENST00000443353 UBAP1LF5GYI3 381 aa16.38■□□□□ 0.21
PDK1-208ENST00000443353 NLRP1Q9C000 1473 aa16.37■□□□□ 0.21
PDK1-208ENST00000443353 UGGT1Q9NYU2 1555 aa16.36■□□□□ 0.21
PDK1-208ENST00000443353 ERVK-7P63135 1459 aa16.35■□□□□ 0.21
PDK1-208ENST00000443353 SPATA31D1Q6ZQQ2 1576 aa16.35■□□□□ 0.21
PDK1-208ENST00000443353 ANKLE2Q86XL3 938 aa16.35■□□□□ 0.21
PDK1-208ENST00000443353 THEMISQ8N1K5 641 aaPredicted RBP16.35■□□□□ 0.21
PDK1-208ENST00000443353 RRP7BPQ9NSQ0 103 aa16.35■□□□□ 0.21
PDK1-208ENST00000443353 KIF15Q9NS87 1388 aa16.34■□□□□ 0.21
PDK1-208ENST00000443353 SHANK2Q9UPX8 1470 aa16.34■□□□□ 0.21
PDK1-208ENST00000443353 DUOX2Q9NRD8 1548 aa16.34■□□□□ 0.21
PDK1-208ENST00000443353 EIF2AK4Q9P2K8 1649 aaKnown RBP16.34■□□□□ 0.21
PDK1-208ENST00000443353 MED14O60244 1454 aa16.33■□□□□ 0.2
PDK1-208ENST00000443353 VWDEQ8N2E2 1590 aa16.33■□□□□ 0.2
PDK1-208ENST00000443353 NPHP4O75161 1426 aaPredicted RBP16.32■□□□□ 0.2
PDK1-208ENST00000443353 POLR1AO95602 1720 aaPredicted RBP16.32■□□□□ 0.2
PDK1-208ENST00000443353 PTPN23Q9H3S7 1636 aa16.31■□□□□ 0.2
PDK1-208ENST00000443353 DAPK1P53355 1430 aa16.31■□□□□ 0.2
PDK1-208ENST00000443353 ZC3H13Q5T200 1668 aaKnown RBP16.3■□□□□ 0.2
PDK1-208ENST00000443353 FGD6Q6ZV73 1430 aa16.3■□□□□ 0.2
PDK1-208ENST00000443353 CHIC2Q9UKJ5 165 aa16.29■□□□□ 0.2
PDK1-208ENST00000443353 ERBINQ96RT1 1412 aa16.28■□□□□ 0.2
PDK1-208ENST00000443353 CEP152O94986 1710 aa16.28■□□□□ 0.2
PDK1-208ENST00000443353 DEPDC5O75140 1603 aa16.28■□□□□ 0.2
PDK1-208ENST00000443353 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.28■□□□□ 0.22e-11■■□□□ 11.7
PDK1-208ENST00000443353 CPS1P31327 1500 aa16.28■□□□□ 0.2
PDK1-208ENST00000443353 PRDM15P57071 1507 aaPredicted RBP16.28■□□□□ 0.2
PDK1-208ENST00000443353 CROCC2H7BZ55 1655 aa16.27■□□□□ 0.2
PDK1-208ENST00000443353 ALKQ9UM73 1620 aa16.27■□□□□ 0.2
PDK1-208ENST00000443353 LTKP29376 864 aa16.27■□□□□ 0.2
PDK1-208ENST00000443353 PIP4K2BP78356 416 aa16.27■□□□□ 0.2
PDK1-208ENST00000443353 APLP2Q06481 763 aa16.27■□□□□ 0.2
PDK1-208ENST00000443353 ARHGAP31Q2M1Z3 1444 aa16.27■□□□□ 0.19
PDK1-208ENST00000443353 HSPA1LP34931 641 aa16.26■□□□□ 0.19
PDK1-208ENST00000443353 IQGAP1P46940 1657 aa16.24■□□□□ 0.19
PDK1-208ENST00000443353 ARHGAP23Q9P227 1491 aa16.23■□□□□ 0.19
PDK1-208ENST00000443353 SCAF1Q9H7N4 1312 aaKnown RBP16.23■□□□□ 0.19
PDK1-208ENST00000443353 UBR1Q8IWV7 1749 aa16.23■□□□□ 0.19
PDK1-208ENST00000443353 TOM1O60784 492 aa16.22■□□□□ 0.19
PDK1-208ENST00000443353 LRRC7Q96NW7 1537 aa16.22■□□□□ 0.19
PDK1-208ENST00000443353 STRCP1A6NGW2 1772 aa16.22■□□□□ 0.19
PDK1-208ENST00000443353 SOCS7O14512 581 aa16.21■□□□□ 0.19
PDK1-208ENST00000443353 TXNDC2Q86VQ3 553 aa16.21■□□□□ 0.19
PDK1-208ENST00000443353 ANKRD30AQ9BXX3 1397 aa16.21■□□□□ 0.19
PDK1-208ENST00000443353 SCAF11Q99590 1463 aaKnown RBP16.21■□□□□ 0.19
PDK1-208ENST00000443353 SLIT1O75093 1534 aa16.2■□□□□ 0.18
PDK1-208ENST00000443353 LMTK2Q8IWU2 1503 aa16.19■□□□□ 0.18
PDK1-208ENST00000443353 IDI1Q13907 227 aa16.19■□□□□ 0.18
PDK1-208ENST00000443353 PIK3C2BO00750 1634 aa16.18■□□□□ 0.18
PDK1-208ENST00000443353 ADGRL2O95490 1459 aa16.17■□□□□ 0.18
PDK1-208ENST00000443353 TMEM2Q9UHN6 1383 aa16.17■□□□□ 0.18
PDK1-208ENST00000443353 FAM50AQ14320 339 aaKnown RBP16.17■□□□□ 0.18
PDK1-208ENST00000443353 SYNMO15061 1565 aa16.17■□□□□ 0.18
PDK1-208ENST00000443353 KANK1Q14678 1352 aa16.16■□□□□ 0.18
PDK1-208ENST00000443353 CFAP65Q6ZU64 1925 aaKnown RBP16.15■□□□□ 0.18
PDK1-208ENST00000443353 NOS1P29475 1434 aa16.15■□□□□ 0.18
PDK1-208ENST00000443353 SENP3Q9H4L4 574 aaPredicted RBP16.14■□□□□ 0.17
PDK1-208ENST00000443353 EFCAB6Q5THR3 1501 aa16.13■□□□□ 0.17
PDK1-208ENST00000443353 EID1Q9Y6B2 187 aa16.12■□□□□ 0.17
PDK1-208ENST00000443353 ANKRD50Q9ULJ7 1429 aa16.11■□□□□ 0.17
PDK1-208ENST00000443353 SLC26A8Q96RN1 970 aa16.11■□□□□ 0.17
PDK1-208ENST00000443353 STAG3Q9UJ98 1225 aa16.11■□□□□ 0.17
PDK1-208ENST00000443353 MED1Q15648 1581 aaPredicted RBP16.11■□□□□ 0.17
PDK1-208ENST00000443353 RBM33Q96EV2 1170 aaKnown RBP16.1■□□□□ 0.17
PDK1-208ENST00000443353 TET3O43151 1660 aa16.09■□□□□ 0.17
PDK1-208ENST00000443353 ADGRB3O60242 1522 aa16.07■□□□□ 0.16
PDK1-208ENST00000443353 PPARGC1BQ86YN6 1023 aaKnown RBP16.06■□□□□ 0.16
PDK1-208ENST00000443353 SLC52A1Q9NWF4 448 aa16.06■□□□□ 0.16
PDK1-208ENST00000443353 XIRP1Q702N8 1843 aaKnown RBP16.05■□□□□ 0.16
PDK1-208ENST00000443353 KDM5AP29375 1690 aaKnown RBP16.05■□□□□ 0.16
PDK1-208ENST00000443353 TMEM94Q12767 1356 aa16.05■□□□□ 0.16
PDK1-208ENST00000443353 KCNA6P17658 529 aa16.05■□□□□ 0.16
PDK1-208ENST00000443353 ZFYVE9O95405 1425 aa16.04■□□□□ 0.16
PDK1-208ENST00000443353 RPRD2Q5VT52 1461 aaKnown RBP16.03■□□□□ 0.16
PDK1-208ENST00000443353 ROCK1Q13464 1354 aa16.01■□□□□ 0.15
PDK1-208ENST00000443353 UNC13BO14795 1591 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms