RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 KIDINS220Q9ULH0 1771 aa20.9■□□□□ 0.94
LINC00299-202ENST00000442956 MLH3Q9UHC1 1453 aa20.9■□□□□ 0.94
LINC00299-202ENST00000442956 TEX14Q8IWB6 1497 aa20.89■□□□□ 0.93
LINC00299-202ENST00000442956 KIF3BO15066 747 aa20.88■□□□□ 0.93
LINC00299-202ENST00000442956 HECW2Q9P2P5 1572 aa20.86■□□□□ 0.93
LINC00299-202ENST00000442956 A2MP01023 1474 aa20.85■□□□□ 0.93
LINC00299-202ENST00000442956 DEPDC5O75140 1603 aa20.83■□□□□ 0.93
LINC00299-202ENST00000442956 EIF2AK4Q9P2K8 1649 aaKnown RBP20.83■□□□□ 0.92
LINC00299-202ENST00000442956 KANK1Q14678 1352 aa20.82■□□□□ 0.92
LINC00299-202ENST00000442956 PLA2R1Q13018 1463 aa20.81■□□□□ 0.92
LINC00299-202ENST00000442956 CCDC144AA2RUR9 1427 aa20.8■□□□□ 0.92
LINC00299-202ENST00000442956 RICTORQ6R327 1708 aa20.79■□□□□ 0.92
LINC00299-202ENST00000442956 ABCA6Q8N139 1617 aa20.78■□□□□ 0.92
LINC00299-202ENST00000442956 FRMPD1Q5SYB0 1578 aa20.78■□□□□ 0.92
LINC00299-202ENST00000442956 PRDM15P57071 1507 aaPredicted RBP20.77■□□□□ 0.92
LINC00299-202ENST00000442956 NBPF8Q3BBV2 869 aa20.77■□□□□ 0.92
LINC00299-202ENST00000442956 VWDEQ8N2E2 1590 aa20.77■□□□□ 0.92
LINC00299-202ENST00000442956 PPRC1Q5VV67 1664 aaKnown RBP20.77■□□□□ 0.92
LINC00299-202ENST00000442956 ATP10AO60312 1499 aa20.77■□□□□ 0.92
LINC00299-202ENST00000442956 MROH1Q8NDA8 1641 aa20.77■□□□□ 0.91
LINC00299-202ENST00000442956 TSPOAP1O95153 1857 aa20.76■□□□□ 0.91
LINC00299-202ENST00000442956 HIRIP3Q9BW71 556 aaPredicted RBP20.75■□□□□ 0.91
LINC00299-202ENST00000442956 DIP2CQ9Y2E4 1556 aa20.73■□□□□ 0.91
LINC00299-202ENST00000442956 YEATS2Q9ULM3 1422 aa20.73■□□□□ 0.91
LINC00299-202ENST00000442956 TET3O43151 1660 aa20.72■□□□□ 0.91
LINC00299-202ENST00000442956 KIF13AQ9H1H9 1805 aa20.72■□□□□ 0.91
LINC00299-202ENST00000442956 E9PCH4 1651 aa20.71■□□□□ 0.91
LINC00299-202ENST00000442956 RNF17Q9BXT8 1623 aaKnown RBP20.71■□□□□ 0.91
LINC00299-202ENST00000442956 GGT6Q6P531 493 aa20.71■□□□□ 0.91
LINC00299-202ENST00000442956 ZMYM4Q5VZL5 1548 aa20.7■□□□□ 0.9
LINC00299-202ENST00000442956 ZNF326Q5BKZ1 582 aaKnown RBP20.7■□□□□ 0.9
LINC00299-202ENST00000442956 PTPRTO14522 1441 aa20.69■□□□□ 0.9
LINC00299-202ENST00000442956 DCAF11Q8TEB1 546 aa20.69■□□□□ 0.9
LINC00299-202ENST00000442956 RGL3Q3MIN7 710 aa20.67■□□□□ 0.9
LINC00299-202ENST00000442956 KDM2AQ9Y2K7 1162 aa20.67■□□□□ 0.9
LINC00299-202ENST00000442956 UHRF1BP1Q6BDS2 1440 aa20.67■□□□□ 0.9
LINC00299-202ENST00000442956 EIF4G2P78344 907 aaKnown RBP eCLIP20.67■□□□□ 0.9
LINC00299-202ENST00000442956 LMTK2Q8IWU2 1503 aa20.67■□□□□ 0.9
LINC00299-202ENST00000442956 BCORL1Q5H9F3 1711 aa20.66■□□□□ 0.9
LINC00299-202ENST00000442956 HSPA5P11021 654 aaKnown RBP20.66■□□□□ 0.9
LINC00299-202ENST00000442956 TRPM2O94759 1503 aa20.66■□□□□ 0.9
LINC00299-202ENST00000442956 EFCAB6Q5THR3 1501 aa20.65■□□□□ 0.9
LINC00299-202ENST00000442956 MIER1Q8N108 512 aa20.63■□□□□ 0.89
LINC00299-202ENST00000442956 WASHC2CQ9Y4E1 1318 aa20.63■□□□□ 0.89
LINC00299-202ENST00000442956 COL17A1Q9UMD9 1497 aaPredicted RBP20.63■□□□□ 0.89
LINC00299-202ENST00000442956 SPHKAPQ2M3C7 1700 aa20.62■□□□□ 0.89
LINC00299-202ENST00000442956 SPATA31E1Q6ZUB1 1445 aa20.6■□□□□ 0.89
LINC00299-202ENST00000442956 CEP152O94986 1710 aa20.6■□□□□ 0.89
LINC00299-202ENST00000442956 ABCC3O15438 1527 aa20.6■□□□□ 0.89
LINC00299-202ENST00000442956 RALGAPBQ86X10 1494 aa20.59■□□□□ 0.89
LINC00299-202ENST00000442956 DDX10Q13206 875 aaKnown RBP20.59■□□□□ 0.89
LINC00299-202ENST00000442956 NPATQ14207 1427 aa20.58■□□□□ 0.88
LINC00299-202ENST00000442956 CLTCL1P53675 1640 aa20.58■□□□□ 0.88
LINC00299-202ENST00000442956 PRAG1Q86YV5 1406 aa20.57■□□□□ 0.88
LINC00299-202ENST00000442956 USP47Q96K76 1375 aa20.53■□□□□ 0.88
LINC00299-202ENST00000442956 UGGT1Q9NYU2 1555 aa20.53■□□□□ 0.88
LINC00299-202ENST00000442956 REREQ9P2R6 1566 aa20.53■□□□□ 0.88
LINC00299-202ENST00000442956 CARD11Q9BXL7 1154 aa20.53■□□□□ 0.88
LINC00299-202ENST00000442956 WASHC2AQ641Q2 1341 aa20.51■□□□□ 0.87
LINC00299-202ENST00000442956 DNAJC5Q9H3Z4 198 aa20.5■□□□□ 0.87
LINC00299-202ENST00000442956 AGLP35573 1532 aa20.5■□□□□ 0.87
LINC00299-202ENST00000442956 ROCK2O75116 1388 aaKnown RBP20.5■□□□□ 0.87
LINC00299-202ENST00000442956 CAMSAP1Q5T5Y3 1602 aa20.5■□□□□ 0.87
LINC00299-202ENST00000442956 CNTLNQ9NXG0 1405 aa20.5■□□□□ 0.87
LINC00299-202ENST00000442956 ARHGEF40Q8TER5 1519 aa20.49■□□□□ 0.87
LINC00299-202ENST00000442956 TRHP20396 242 aaPredicted RBP20.49■□□□□ 0.87
LINC00299-202ENST00000442956 ARHGAP31Q2M1Z3 1444 aa20.49■□□□□ 0.87
LINC00299-202ENST00000442956 ZC3H13Q5T200 1668 aaKnown RBP20.48■□□□□ 0.87
LINC00299-202ENST00000442956 NEURL4Q96JN8 1562 aa20.47■□□□□ 0.87
LINC00299-202ENST00000442956 STAC3Q96MF2 364 aa20.47■□□□□ 0.87
LINC00299-202ENST00000442956 C11orf95C9JLR9 678 aaPredicted RBP20.47■□□□□ 0.87
LINC00299-202ENST00000442956 NOS1P29475 1434 aa20.47■□□□□ 0.87
LINC00299-202ENST00000442956 NBPF1Q3BBV0 1214 aa20.46■□□□□ 0.87
LINC00299-202ENST00000442956 TRPM1Q7Z4N2 1603 aa20.46■□□□□ 0.87
LINC00299-202ENST00000442956 PPP6R1Q9UPN7 881 aa20.44■□□□□ 0.86
LINC00299-202ENST00000442956 GPRASP1Q5JY77 1395 aa20.44■□□□□ 0.86
LINC00299-202ENST00000442956 CCDC7Q96M83 1385 aa20.44■□□□□ 0.86
LINC00299-202ENST00000442956 CHGAP10645 457 aaKnown RBP20.43■□□□□ 0.86
LINC00299-202ENST00000442956 MLECQ14165 292 aa20.42■□□□□ 0.86
LINC00299-202ENST00000442956 SIGLEC1Q9BZZ2 1709 aa20.42■□□□□ 0.86
LINC00299-202ENST00000442956 CFAP65Q6ZU64 1925 aaKnown RBP20.41■□□□□ 0.86
LINC00299-202ENST00000442956 ADGRB3O60242 1522 aa20.4■□□□□ 0.86
LINC00299-202ENST00000442956 KIF1BO60333 1816 aa20.4■□□□□ 0.86
LINC00299-202ENST00000442956 KIF7Q2M1P5 1343 aa20.4■□□□□ 0.86
LINC00299-202ENST00000442956 ST20-MTHFSA0A0A6YYL1 179 aa20.4■□□□□ 0.86
LINC00299-202ENST00000442956 MADDQ8WXG6 1647 aa20.4■□□□□ 0.86
LINC00299-202ENST00000442956 SYNMO15061 1565 aa20.39■□□□□ 0.86
LINC00299-202ENST00000442956 MROH2AA6NES4 1674 aa20.37■□□□□ 0.85
LINC00299-202ENST00000442956 MYOM2P54296 1465 aa20.37■□□□□ 0.85
LINC00299-202ENST00000442956 SLC52A1Q9NWF4 448 aa20.36■□□□□ 0.85
LINC00299-202ENST00000442956 LAMC1P11047 1609 aa20.36■□□□□ 0.85
LINC00299-202ENST00000442956 FBXO31Q5XUX0 539 aaPredicted RBP20.36■□□□□ 0.85
LINC00299-202ENST00000442956 ADGRF5Q8IZF2 1346 aa20.35■□□□□ 0.85
LINC00299-202ENST00000442956 PIK3C2BO00750 1634 aa20.35■□□□□ 0.85
LINC00299-202ENST00000442956 IDI1Q13907 227 aa20.35■□□□□ 0.85
LINC00299-202ENST00000442956 ARID4BQ4LE39 1312 aaPredicted RBP20.35■□□□□ 0.85
LINC00299-202ENST00000442956 ANP32CO43423 234 aa20.33■□□□□ 0.85
LINC00299-202ENST00000442956 PREX1Q8TCU6 1659 aa20.32■□□□□ 0.84
LINC00299-202ENST00000442956 ERVK-7P63135 1459 aa20.32■□□□□ 0.84
LINC00299-202ENST00000442956 RPGRIP1LQ68CZ1 1315 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms