RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 PKD2Q13563 968 aa13.36□□□□□ -0.27
TOP3B-209ENST00000442653 A2ML1A8K2U0 1454 aa13.36□□□□□ -0.27
TOP3B-209ENST00000442653 DNMT1P26358 1616 aaKnown RBP13.35□□□□□ -0.27
TOP3B-209ENST00000442653 FBXO31Q5XUX0 539 aaPredicted RBP13.35□□□□□ -0.27
TOP3B-209ENST00000442653 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
TOP3B-209ENST00000442653 ARHGEF5Q12774 1597 aa13.34□□□□□ -0.27
TOP3B-209ENST00000442653 ILDR2Q71H61 639 aa13.34□□□□□ -0.27
TOP3B-209ENST00000442653 PZPP20742 1482 aa13.34□□□□□ -0.27
TOP3B-209ENST00000442653 TNRQ92752 1358 aa13.32□□□□□ -0.28
TOP3B-209ENST00000442653 VPS8Q8N3P4 1428 aa13.32□□□□□ -0.28
TOP3B-209ENST00000442653 LRRC9Q6ZRR7 1453 aa13.32□□□□□ -0.28
TOP3B-209ENST00000442653 RSPH4AQ5TD94 716 aa13.32□□□□□ -0.28
TOP3B-209ENST00000442653 FAM135AQ9P2D6 1515 aa13.32□□□□□ -0.28
TOP3B-209ENST00000442653 NEURL4Q96JN8 1562 aa13.32□□□□□ -0.28
TOP3B-209ENST00000442653 LOC105371045A0A1W2PR82 267 aa13.31□□□□□ -0.28
TOP3B-209ENST00000442653 SPATA31D1Q6ZQQ2 1576 aa13.31□□□□□ -0.28
TOP3B-209ENST00000442653 WASHC2CQ9Y4E1 1318 aa13.31□□□□□ -0.28
TOP3B-209ENST00000442653 UBAP1LF5GYI3 381 aa13.3□□□□□ -0.28
TOP3B-209ENST00000442653 POLR1AO95602 1720 aaPredicted RBP13.29□□□□□ -0.28
TOP3B-209ENST00000442653 KANK4Q5T7N3 995 aaPredicted RBP13.28□□□□□ -0.28
TOP3B-209ENST00000442653 MIA2Q96PC5 1412 aa13.28□□□□□ -0.28
TOP3B-209ENST00000442653 RNF17Q9BXT8 1623 aaKnown RBP13.28□□□□□ -0.28
TOP3B-209ENST00000442653 TSPY4P0CV99 314 aa13.27□□□□□ -0.29
TOP3B-209ENST00000442653 TSPY10P0CW01 314 aa13.27□□□□□ -0.29
TOP3B-209ENST00000442653 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.27□□□□□ -0.29
TOP3B-209ENST00000442653 ABCC3O15438 1527 aa13.27□□□□□ -0.29
TOP3B-209ENST00000442653 MAST1Q9Y2H9 1570 aa13.27□□□□□ -0.29
TOP3B-209ENST00000442653 NLRP1Q9C000 1473 aa13.26□□□□□ -0.29
TOP3B-209ENST00000442653 MROH1Q8NDA8 1641 aa13.25□□□□□ -0.29
TOP3B-209ENST00000442653 MAP3K1Q13233 1512 aa13.25□□□□□ -0.29
TOP3B-209ENST00000442653 UGGT1Q9NYU2 1555 aa13.24□□□□□ -0.29
TOP3B-209ENST00000442653 SHANK2Q9UPX8 1470 aa13.24□□□□□ -0.29
TOP3B-209ENST00000442653 MYOM3Q5VTT5 1437 aa13.24□□□□□ -0.29
TOP3B-209ENST00000442653 VWDEQ8N2E2 1590 aa13.24□□□□□ -0.29
TOP3B-209ENST00000442653 SOCS7O14512 581 aa13.23□□□□□ -0.29
TOP3B-209ENST00000442653 ANKLE2Q86XL3 938 aa13.23□□□□□ -0.29
TOP3B-209ENST00000442653 THEMISQ8N1K5 641 aaPredicted RBP13.23□□□□□ -0.29
TOP3B-209ENST00000442653 ZC3H13Q5T200 1668 aaKnown RBP13.23□□□□□ -0.29
TOP3B-209ENST00000442653 EIF2AK4Q9P2K8 1649 aaKnown RBP13.23□□□□□ -0.29
TOP3B-209ENST00000442653 CPS1P31327 1500 aa13.23□□□□□ -0.29
TOP3B-209ENST00000442653 DEPDC5O75140 1603 aa13.22□□□□□ -0.29
TOP3B-209ENST00000442653 MED14O60244 1454 aa13.22□□□□□ -0.29
TOP3B-209ENST00000442653 ERVK-7P63135 1459 aa13.22□□□□□ -0.29
TOP3B-209ENST00000442653 NPHP4O75161 1426 aaPredicted RBP13.22□□□□□ -0.29
TOP3B-209ENST00000442653 CEP152O94986 1710 aa13.2□□□□□ -0.3
TOP3B-209ENST00000442653 PIAS4Q8N2W9 510 aaPredicted RBP13.2□□□□□ -0.3
TOP3B-209ENST00000442653 IQGAP1P46940 1657 aa13.19□□□□□ -0.3
TOP3B-209ENST00000442653 DUOX2Q9NRD8 1548 aa13.18□□□□□ -0.3
TOP3B-209ENST00000442653 ALKQ9UM73 1620 aa13.18□□□□□ -0.3
TOP3B-209ENST00000442653 HSPA1LP34931 641 aa13.18□□□□□ -0.3
TOP3B-209ENST00000442653 PIP4K2BP78356 416 aa13.18□□□□□ -0.3
TOP3B-209ENST00000442653 ABCC5O15440 1437 aa13.18□□□□□ -0.3
TOP3B-209ENST00000442653 KIF15Q9NS87 1388 aa13.18□□□□□ -0.3
TOP3B-209ENST00000442653 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
TOP3B-209ENST00000442653 CROCC2H7BZ55 1655 aa13.17□□□□□ -0.3
TOP3B-209ENST00000442653 PRDM15P57071 1507 aaPredicted RBP13.17□□□□□ -0.3
TOP3B-209ENST00000442653 STRCP1A6NGW2 1772 aa13.17□□□□□ -0.3
TOP3B-209ENST00000442653 UBR1Q8IWV7 1749 aa13.16□□□□□ -0.3
TOP3B-209ENST00000442653 PTPN23Q9H3S7 1636 aa13.16□□□□□ -0.3
TOP3B-209ENST00000442653 CFAP65Q6ZU64 1925 aaKnown RBP13.15□□□□□ -0.3
TOP3B-209ENST00000442653 TOM1O60784 492 aa13.15□□□□□ -0.3
TOP3B-209ENST00000442653 ERBINQ96RT1 1412 aa13.14□□□□□ -0.31
TOP3B-209ENST00000442653 RRP7BPQ9NSQ0 103 aa13.14□□□□□ -0.31
TOP3B-209ENST00000442653 DAPK1P53355 1430 aa13.13□□□□□ -0.31
TOP3B-209ENST00000442653 ARHGAP31Q2M1Z3 1444 aa13.13□□□□□ -0.31
TOP3B-209ENST00000442653 LRRC7Q96NW7 1537 aa13.13□□□□□ -0.31
TOP3B-209ENST00000442653 SCAF11Q99590 1463 aaKnown RBP13.13□□□□□ -0.31
TOP3B-209ENST00000442653 FGD6Q6ZV73 1430 aa13.13□□□□□ -0.31
TOP3B-209ENST00000442653 MED1Q15648 1581 aaPredicted RBP13.12□□□□□ -0.31
TOP3B-209ENST00000442653 ARHGAP23Q9P227 1491 aa13.12□□□□□ -0.31
TOP3B-209ENST00000442653 LTKP29376 864 aa13.12□□□□□ -0.31
TOP3B-209ENST00000442653 SLIT1O75093 1534 aa13.12□□□□□ -0.31
TOP3B-209ENST00000442653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.11□□□□□ -0.313e-6■■■□□ 14.6
TOP3B-209ENST00000442653 SYNMO15061 1565 aa13.11□□□□□ -0.31
TOP3B-209ENST00000442653 PIK3C2BO00750 1634 aa13.1□□□□□ -0.31
TOP3B-209ENST00000442653 APLP2Q06481 763 aa13.09□□□□□ -0.31
TOP3B-209ENST00000442653 TXNDC2Q86VQ3 553 aa13.09□□□□□ -0.31
TOP3B-209ENST00000442653 CHIC2Q9UKJ5 165 aa13.08□□□□□ -0.32
TOP3B-209ENST00000442653 LMTK2Q8IWU2 1503 aa13.07□□□□□ -0.32
TOP3B-209ENST00000442653 KANK1Q14678 1352 aa13.07□□□□□ -0.32
TOP3B-209ENST00000442653 ANKRD30AQ9BXX3 1397 aa13.07□□□□□ -0.32
TOP3B-209ENST00000442653 TMEM2Q9UHN6 1383 aa13.07□□□□□ -0.32
TOP3B-209ENST00000442653 XIRP1Q702N8 1843 aaKnown RBP13.05□□□□□ -0.32
TOP3B-209ENST00000442653 EFCAB6Q5THR3 1501 aa13.04□□□□□ -0.32
TOP3B-209ENST00000442653 IDI1Q13907 227 aa13.04□□□□□ -0.32
TOP3B-209ENST00000442653 EID1Q9Y6B2 187 aa13.04□□□□□ -0.32
TOP3B-209ENST00000442653 KDM5AP29375 1690 aaKnown RBP13.04□□□□□ -0.32
TOP3B-209ENST00000442653 NOS1P29475 1434 aa13.03□□□□□ -0.32
TOP3B-209ENST00000442653 ADGRL2O95490 1459 aa13.03□□□□□ -0.32
TOP3B-209ENST00000442653 STAG3Q9UJ98 1225 aa13.02□□□□□ -0.33
TOP3B-209ENST00000442653 ADGRB3O60242 1522 aa13.01□□□□□ -0.33
TOP3B-209ENST00000442653 TET3O43151 1660 aa13□□□□□ -0.33
TOP3B-209ENST00000442653 SLC26A8Q96RN1 970 aa13□□□□□ -0.33
TOP3B-209ENST00000442653 ANKRD50Q9ULJ7 1429 aa12.99□□□□□ -0.33
TOP3B-209ENST00000442653 TMEM94Q12767 1356 aa12.99□□□□□ -0.33
TOP3B-209ENST00000442653 FAM50AQ14320 339 aaKnown RBP12.99□□□□□ -0.33
TOP3B-209ENST00000442653 KCNA6P17658 529 aa12.97□□□□□ -0.33
TOP3B-209ENST00000442653 RBM33Q96EV2 1170 aaKnown RBP12.97□□□□□ -0.33
TOP3B-209ENST00000442653 RPRD2Q5VT52 1461 aaKnown RBP12.97□□□□□ -0.33
TOP3B-209ENST00000442653 SLC52A1Q9NWF4 448 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms